Cow genome map


           Conread name:
           Liv1-LVRM1D020201
        

               Conread position:
               203-430
               

               Cow position:
               chr6:882980-883211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               89, 66
               

               Conread position:
               206-647
               

               Cow position:
               chr6:37755591-37755133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 60
               

               Conread position:
               249-642
               

               Cow position:
               chr6:18939279-18939657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               183, 84
               

               Conread position:
               249-649
               

               Cow position:
               chr6:15495676-15496075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               282
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               52, 194
               

               Conread position:
               253-645
               

               Cow position:
               chr6:19954306-19954694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               260-642
               

               Cow position:
               chr6:46180613-46181011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               261-649
               

               Cow position:
               chr6:27641348-27641736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               283
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               47, 77
               

               Conread position:
               298-649
               

               Cow position:
               chr6:26440346-26440707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               317-581
               

               Cow position:
               chr6:30284826-30284553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 18
               
Show alignments to all cow chromosomes.