Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 1-619 |
| Cow position: | chr12:42858397-42857783 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 411 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 33, 126 |
| Conread position: | 3-620 |
| Cow position: | chr12:6405500-6404886 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 393 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 124 |
| Conread position: | 31-620 |
| Cow position: | chr12:42607095-42606498 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 379 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 106, 89 |
| Conread position: | 31-630 |
| Cow position: | chr12:32654718-32655313 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 366 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 79 |
| Conread position: | 188-620 |
| Cow position: | chr12:8138834-8138406 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 206-620 |
| Cow position: | chr12:27854634-27854212 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 247-620 |
| Cow position: | chr12:21428215-21427840 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 176, 245 |
| Conread position: | 255-620 |
| Cow position: | chr12:30677012-30677390 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 140, 11 |
| Conread position: | 267-620 |
| Cow position: | chr12:21429393-21429761 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-630 |
| Cow position: | chr12:15078233-15078594 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 181 |
| Conread position: | 271-620 |
| Cow position: | chr12:22568366-22568005 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 303 |
| Conread position: | 271-620 |
| Cow position: | chr12:24994574-24994210 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 234 |
| Conread position: | 307-630 |
| Cow position: | chr12:24929068-24928738 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 165 |
| Conread position: | 316-630 |
| Cow position: | chr12:10679983-10679661 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 382-615 |
| Cow position: | chr12:39038952-39038720 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 395-658 |
| Cow position: | chr12:41464994-41464729 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 64 |
| Conread position: | 411-621 |
| Cow position: | chr12:8891413-8891205 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 412-620 |
| Cow position: | chr12:11193818-11194022 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 204, 88 |
| Conread position: | 412-620 |
| Cow position: | chr12:11205089-11205293 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 204, 88 |
| Conread position: | 413-620 |
| Cow position: | chr12:21253041-21252834 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 137, 194 |
| Conread position: | 413-621 |
| Cow position: | chr12:22519435-22519226 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 422-620 |
| Cow position: | chr12:3209523-3209722 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 472-655 |
| Cow position: | chr12:38345058-38344874 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 48 |
Show alignments to all cow chromosomes.