Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 1-620 |
| Cow position: | chr13:31729974-31729371 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 390 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 1-620 |
| Cow position: | chr13:34041417-34040800 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 407 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 36, 92 |
| Conread position: | 4-239 |
| Cow position: | chr13:44652894-44652663 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 6-211 |
| Cow position: | chr13:47837125-47836919 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 166, 16 |
| Conread position: | 8-620 |
| Cow position: | chr13:34342833-34343439 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 397 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 31-628 |
| Cow position: | chr13:11738872-11739455 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 400 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 43-620 |
| Cow position: | chr13:30276354-30275806 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 367 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 128-628 |
| Cow position: | chr13:34030633-34031140 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 330 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 155-630 |
| Cow position: | chr13:44752024-44752505 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 204-629 |
| Cow position: | chr13:61051928-61051510 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 206-620 |
| Cow position: | chr13:33335197-33334788 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 206-620 |
| Cow position: | chr13:35758395-35758813 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 207-620 |
| Cow position: | chr13:31508020-31508439 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 244-628 |
| Cow position: | chr13:14186141-14186541 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 11, 239 |
| Conread position: | 267-619 |
| Cow position: | chr13:14401941-14401576 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 267-620 |
| Cow position: | chr13:5500833-5500466 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 267-620 |
| Cow position: | chr13:21697429-21697797 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-620 |
| Cow position: | chr13:46527614-46527976 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 46, 203 |
| Conread position: | 267-627 |
| Cow position: | chr13:13326094-13326466 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 271-570 |
| Cow position: | chr13:14177680-14177372 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 59 |
| Conread position: | 271-575 |
| Cow position: | chr13:34377689-34377391 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 176 |
| Conread position: | 271-628 |
| Cow position: | chr13:37835150-37834782 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 50 |
| Conread position: | 272-616 |
| Cow position: | chr13:3534710-3534361 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 272-633 |
| Cow position: | chr13:11071100-11070748 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 127, 11 |
| Conread position: | 277-624 |
| Cow position: | chr13:32179590-32179949 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 278-620 |
| Cow position: | chr13:32735992-32735659 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 219, 9 |
| Conread position: | 279-620 |
| Cow position: | chr13:33524777-33524423 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 279-631 |
| Cow position: | chr13:16816271-16816625 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 281-620 |
| Cow position: | chr13:49494997-49494646 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 291-620 |
| Cow position: | chr13:50193206-50192865 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 291-629 |
| Cow position: | chr13:4193501-4193167 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 291-629 |
| Cow position: | chr13:44652650-44652314 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 292-629 |
| Cow position: | chr13:21839008-21838665 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 92 |
| Conread position: | 403-630 |
| Cow position: | chr13:11763318-11763090 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 422-620 |
| Cow position: | chr13:11388331-11388530 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 423-630 |
| Cow position: | chr13:19128300-19128093 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 103 |
| Conread position: | 424-620 |
| Cow position: | chr13:1048680-1048489 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 446-620 |
| Cow position: | chr13:3760271-3760096 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.