Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 3-504 |
| Cow position: | chr15:29866923-29866430 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 331 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 4-620 |
| Cow position: | chr15:19737257-19736649 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 398 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 4-620 |
| Cow position: | chr15:21664942-21664336 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 394 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 158 |
| Conread position: | 4-628 |
| Cow position: | chr15:2077456-2078066 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 396 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 123 |
| Conread position: | 8-618 |
| Cow position: | chr15:2926112-2926695 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 387 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 9-620 |
| Cow position: | chr15:4962441-4963019 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 385 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 13-620 |
| Cow position: | chr15:6155136-6154521 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 398 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 11, 115 |
| Conread position: | 31-629 |
| Cow position: | chr15:6383344-6382746 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 375 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 96, 125 |
| Conread position: | 200-620 |
| Cow position: | chr15:25319345-25318936 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 161, 27 |
| Conread position: | 203-620 |
| Cow position: | chr15:4923125-4923551 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 203-620 |
| Cow position: | chr15:24296071-24296493 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 117, 43 |
| Conread position: | 206-620 |
| Cow position: | chr15:20411582-20412002 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 130, 21 |
| Conread position: | 206-620 |
| Cow position: | chr15:51218706-51219130 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 209-630 |
| Cow position: | chr15:3777696-3777273 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 211-639 |
| Cow position: | chr15:13074993-13075421 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 219-628 |
| Cow position: | chr15:17036659-17036240 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 255-620 |
| Cow position: | chr15:31359897-31360270 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 122, 75 |
| Conread position: | 267-575 |
| Cow position: | chr15:2013597-2013922 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 267-619 |
| Cow position: | chr15:33122416-33122783 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-620 |
| Cow position: | chr15:107039-107407 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 267-620 |
| Cow position: | chr15:4197505-4197873 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 293 |
| Conread position: | 267-620 |
| Cow position: | chr15:4672472-4672839 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 208 |
| Conread position: | 267-620 |
| Cow position: | chr15:6561625-6561993 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 267-620 |
| Cow position: | chr15:25205966-25205600 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 106 |
| Conread position: | 267-620 |
| Cow position: | chr15:35898738-35898370 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-620 |
| Cow position: | chr15:41659206-41659574 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-625 |
| Cow position: | chr15:45790948-45791314 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 93, 110 |
| Conread position: | 267-626 |
| Cow position: | chr15:38651231-38651607 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 278 |
| Conread position: | 267-641 |
| Cow position: | chr15:1833601-1833209 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 7, 206 |
| Conread position: | 271-504 |
| Cow position: | chr15:22529707-22529466 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 93, 44 |
| Conread position: | 271-620 |
| Cow position: | chr15:14581318-14580953 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 195 |
| Conread position: | 271-658 |
| Cow position: | chr15:24169185-24168782 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 277-620 |
| Cow position: | chr15:1318473-1318823 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 124, 114 |
| Conread position: | 277-620 |
| Cow position: | chr15:2646601-2646247 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 277-620 |
| Cow position: | chr15:4726250-4726608 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 277-624 |
| Cow position: | chr15:29333744-29333388 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 277-629 |
| Cow position: | chr15:25106145-25105781 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 277-630 |
| Cow position: | chr15:47329829-47329469 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 112, 67 |
| Conread position: | 290-630 |
| Cow position: | chr15:21915063-21915419 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 36, 330 |
| Conread position: | 291-629 |
| Cow position: | chr15:6459961-6460301 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 292-612 |
| Cow position: | chr15:10862740-10862422 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 129 |
| Conread position: | 292-617 |
| Cow position: | chr15:31846509-31846849 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 140 |
| Conread position: | 310-603 |
| Cow position: | chr15:53313793-53314087 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 86, 67 |
| Conread position: | 313-629 |
| Cow position: | chr15:50869423-50869751 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 323-620 |
| Cow position: | chr15:3890008-3890310 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 242 |
| Conread position: | 381-626 |
| Cow position: | chr15:25663873-25664114 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 197, 41 |
| Conread position: | 386-620 |
| Cow position: | chr15:51613309-51613543 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 111, 170 |
| Conread position: | 386-628 |
| Cow position: | chr15:13390153-13389907 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 395-570 |
| Cow position: | chr15:35272295-35272471 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 68, 60 |
| Conread position: | 395-625 |
| Cow position: | chr15:44301926-44301692 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 402-630 |
| Cow position: | chr15:33494840-33495070 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 403-617 |
| Cow position: | chr15:9737737-9737523 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 97, 104 |
| Conread position: | 414-626 |
| Cow position: | chr15:4081036-4080823 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 421-620 |
| Cow position: | chr15:4686935-4687136 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 422-619 |
| Cow position: | chr15:1783538-1783736 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.