Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 1-620 |
| Cow position: | chr17:19267801-19267207 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 389 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 4-620 |
| Cow position: | chr17:6260889-6261497 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 404 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 125-620 |
| Cow position: | chr17:38946501-38946990 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 333 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 201-618 |
| Cow position: | chr17:1538538-1538119 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 206-620 |
| Cow position: | chr17:23323237-23322810 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 219-620 |
| Cow position: | chr17:11086495-11086089 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 151, 27 |
| Conread position: | 266-624 |
| Cow position: | chr17:44926063-44925698 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 267-498 |
| Cow position: | chr17:37214-37447 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 267-620 |
| Cow position: | chr17:182846-183209 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 69 |
| Conread position: | 267-620 |
| Cow position: | chr17:2263411-2263777 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 107, 291 |
| Conread position: | 267-620 |
| Cow position: | chr17:13967197-13967564 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 215 |
| Conread position: | 267-620 |
| Cow position: | chr17:34157392-34157759 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 66, 346 |
| Conread position: | 267-620 |
| Cow position: | chr17:39049485-39049855 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-620 |
| Cow position: | chr17:43989774-43990140 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 271-620 |
| Cow position: | chr17:31094508-31094152 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 273-600 |
| Cow position: | chr17:28874191-28873864 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 92, 57 |
| Conread position: | 277-603 |
| Cow position: | chr17:42260450-42260780 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 253 |
| Conread position: | 278-550 |
| Cow position: | chr17:39453380-39453664 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 279-630 |
| Cow position: | chr17:36001768-36001406 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 172 |
| Conread position: | 285-628 |
| Cow position: | chr17:14936682-14936325 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 290-565 |
| Cow position: | chr17:1656567-1656300 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 122, 44 |
| Conread position: | 291-612 |
| Cow position: | chr17:3654995-3654659 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 291-628 |
| Cow position: | chr17:27793487-27793134 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 310-575 |
| Cow position: | chr17:14269636-14269362 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 319-626 |
| Cow position: | chr17:6626635-6626946 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 127 |
| Conread position: | 400-634 |
| Cow position: | chr17:15685824-15686058 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 91 |
| Conread position: | 402-626 |
| Cow position: | chr17:18191498-18191717 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 403-620 |
| Cow position: | chr17:39860-40078 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 403-620 |
| Cow position: | chr17:14295139-14294916 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 186 |
| Conread position: | 403-629 |
| Cow position: | chr17:24335980-24336200 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 96, 46 |
| Conread position: | 410-620 |
| Cow position: | chr17:41337350-41337152 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 413-619 |
| Cow position: | chr17:4346149-4345942 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 413-620 |
| Cow position: | chr17:2554845-2554637 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 413-628 |
| Cow position: | chr17:19980706-19980490 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 413-629 |
| Cow position: | chr17:17257260-17257043 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 422-629 |
| Cow position: | chr17:6121224-6121433 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 423-630 |
| Cow position: | chr17:3326566-3326776 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 116 |
| Conread position: | 445-629 |
| Cow position: | chr17:11784329-11784514 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.