Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 1-537 |
| Cow position: | chr18:41839577-41839056 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 65 |
| Conread position: | 1-584 |
| Cow position: | chr18:8101189-8100626 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 367 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 1-620 |
| Cow position: | chr18:37507193-37507809 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 397 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 3-268 |
| Cow position: | chr18:18842381-18842113 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 7-239 |
| Cow position: | chr18:32726156-32725920 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 150 |
| Conread position: | 13-620 |
| Cow position: | chr18:54170263-54169677 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 382 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 105 |
| Conread position: | 36-630 |
| Cow position: | chr18:159951-159390 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 377 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 329, 36 |
| Conread position: | 203-509 |
| Cow position: | chr18:24574537-24574244 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 203-620 |
| Cow position: | chr18:16175199-16174774 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 206-620 |
| Cow position: | chr18:23799072-23799490 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 206-620 |
| Cow position: | chr18:29865185-29864765 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 124, 24 |
| Conread position: | 209-620 |
| Cow position: | chr18:4947381-4947793 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 8 |
| Conread position: | 217-620 |
| Cow position: | chr18:51482294-51482700 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 267-620 |
| Cow position: | chr18:29238374-29238732 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 267-620 |
| Cow position: | chr18:47742984-47743337 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 158 |
| Conread position: | 267-620 |
| Cow position: | chr18:54004694-54004330 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 267-625 |
| Cow position: | chr18:14421761-14422127 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 69 |
| Conread position: | 267-626 |
| Cow position: | chr18:26746832-26747202 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 93 |
| Conread position: | 267-628 |
| Cow position: | chr18:19353845-19354224 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 201 |
| Conread position: | 271-601 |
| Cow position: | chr18:48456196-48456521 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 277-620 |
| Cow position: | chr18:12992586-12992923 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 277-625 |
| Cow position: | chr18:37559028-37559378 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 277-631 |
| Cow position: | chr18:15852145-15852508 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 86, 224 |
| Conread position: | 278-631 |
| Cow position: | chr18:44049184-44049538 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 134, 46 |
| Conread position: | 280-546 |
| Cow position: | chr18:45184774-45185049 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 85, 255 |
| Conread position: | 291-628 |
| Cow position: | chr18:24617640-24617990 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 292-620 |
| Cow position: | chr18:51343186-51343529 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 307-630 |
| Cow position: | chr18:46884135-46883810 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 382-621 |
| Cow position: | chr18:42516233-42516476 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 199 |
| Conread position: | 393-635 |
| Cow position: | chr18:41647343-41647103 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 395-620 |
| Cow position: | chr18:11273237-11273012 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 102, 151 |
| Conread position: | 395-630 |
| Cow position: | chr18:48469560-48469322 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 102, 173 |
| Conread position: | 402-620 |
| Cow position: | chr18:24714562-24714342 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 140, 98 |
| Conread position: | 403-620 |
| Cow position: | chr18:40482625-40482842 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 65 |
| Conread position: | 408-619 |
| Cow position: | chr18:12186322-12186532 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 145 |
| Conread position: | 411-620 |
| Cow position: | chr18:26741320-26741115 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 440-625 |
| Cow position: | chr18:38346690-38346876 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 35 |
Show alignments to all cow chromosomes.