Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 4-620 |
| Cow position: | chr21:33253497-33254105 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 389 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 30, 96 |
| Conread position: | 7-238 |
| Cow position: | chr21:1075381-1075619 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 30, 150 |
| Conread position: | 13-619 |
| Cow position: | chr21:47942271-47942870 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 390 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 144 |
| Conread position: | 13-620 |
| Cow position: | chr21:30598158-30597546 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 400 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 11, 116 |
| Conread position: | 31-620 |
| Cow position: | chr21:3780113-3780698 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 385 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 33, 95 |
| Conread position: | 31-626 |
| Cow position: | chr21:43805186-43804599 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 403 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 203-612 |
| Cow position: | chr21:10851574-10851993 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 203-628 |
| Cow position: | chr21:31514817-31514382 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 291 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 206-620 |
| Cow position: | chr21:2417713-2418128 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 219-630 |
| Cow position: | chr21:147438-147857 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 232-577 |
| Cow position: | chr21:3974516-3974169 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 267-620 |
| Cow position: | chr21:6414468-6414100 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 267-620 |
| Cow position: | chr21:37372791-37373150 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 58, 212 |
| Conread position: | 267-628 |
| Cow position: | chr21:39426628-39426999 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 267-634 |
| Cow position: | chr21:25125167-25125544 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 197 |
| Conread position: | 271-620 |
| Cow position: | chr21:2512409-2512773 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 271-620 |
| Cow position: | chr21:24085243-24084878 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 297 |
| Conread position: | 271-629 |
| Cow position: | chr21:21139295-21139643 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 43 |
| Conread position: | 272-625 |
| Cow position: | chr21:405595-405234 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 93, 239 |
| Conread position: | 277-620 |
| Cow position: | chr21:19612326-19612684 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 63, 205 |
| Conread position: | 277-630 |
| Cow position: | chr21:8074402-8074052 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 26 |
| Conread position: | 277-641 |
| Cow position: | chr21:33710715-33711094 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 51, 228 |
| Conread position: | 277-659 |
| Cow position: | chr21:15941243-15941607 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 281-627 |
| Cow position: | chr21:22751858-22751514 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 320-630 |
| Cow position: | chr21:18340845-18340525 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 326-620 |
| Cow position: | chr21:26649081-26648790 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 171, 39 |
| Conread position: | 391-628 |
| Cow position: | chr21:38023824-38024060 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 40 |
| Conread position: | 395-612 |
| Cow position: | chr21:31639611-31639829 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 401-616 |
| Cow position: | chr21:21079403-21079616 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 102, 21 |
| Conread position: | 402-629 |
| Cow position: | chr21:13185319-13185543 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 408-639 |
| Cow position: | chr21:41322848-41323083 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 224 |
| Conread position: | 413-630 |
| Cow position: | chr21:10284864-10285081 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 421-633 |
| Cow position: | chr21:38917274-38917485 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 424-619 |
| Cow position: | chr21:28999446-28999641 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 105 |
| Conread position: | 432-630 |
| Cow position: | chr21:45000993-45001191 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 441-630 |
| Cow position: | chr21:22871776-22871969 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 443-620 |
| Cow position: | chr21:13194793-13194968 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.