Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 1-262 |
| Cow position: | chr28:19946519-19946255 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 121, 155 |
| Conread position: | 1-628 |
| Cow position: | chr28:783845-784465 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 400 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 4-620 |
| Cow position: | chr28:17389592-17390201 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 405 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 29, 129 |
| Conread position: | 4-620 |
| Cow position: | chr28:17666115-17665529 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 384 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 92 |
| Conread position: | 22-620 |
| Cow position: | chr28:5938693-5939286 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 398 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 31-620 |
| Cow position: | chr28:29821215-29821786 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 372 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 93, 114 |
| Conread position: | 115-619 |
| Cow position: | chr28:8380317-8380834 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 336 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 44, 115 |
| Conread position: | 203-620 |
| Cow position: | chr28:1216459-1216039 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 203-620 |
| Cow position: | chr28:1506241-1506664 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 203-620 |
| Cow position: | chr28:10580497-10580074 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 133, 23 |
| Conread position: | 206-620 |
| Cow position: | chr28:3190878-3190454 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 214-620 |
| Cow position: | chr28:32791008-32790601 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 116, 32 |
| Conread position: | 219-619 |
| Cow position: | chr28:1166501-1166096 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 158, 27 |
| Conread position: | 247-628 |
| Cow position: | chr28:12408817-12408414 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 267-570 |
| Cow position: | chr28:24173351-24173043 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 70 |
| Conread position: | 267-620 |
| Cow position: | chr28:1459525-1459893 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 267-620 |
| Cow position: | chr28:22259720-22259357 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 67 |
| Conread position: | 267-621 |
| Cow position: | chr28:24590287-24590655 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 267-628 |
| Cow position: | chr28:7827420-7827787 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 59, 95 |
| Conread position: | 271-579 |
| Cow position: | chr28:33384462-33384149 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 215 |
| Conread position: | 271-620 |
| Cow position: | chr28:27679579-27679939 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 58, 191 |
| Conread position: | 271-660 |
| Cow position: | chr28:9715109-9714718 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 93, 36 |
| Conread position: | 272-619 |
| Cow position: | chr28:1954795-1955152 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 64 |
| Conread position: | 288-612 |
| Cow position: | chr28:10645983-10645648 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 291-629 |
| Cow position: | chr28:29337952-29338295 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 74, 27 |
| Conread position: | 292-620 |
| Cow position: | chr28:34526448-34526119 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 296-620 |
| Cow position: | chr28:9288409-9288745 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 403-620 |
| Cow position: | chr28:7059088-7058870 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 408-647 |
| Cow position: | chr28:22457358-22457597 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 85, 118 |
| Conread position: | 413-620 |
| Cow position: | chr28:31591149-31591357 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.