Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 1-583 |
| Cow position: | chr29:26461089-26460543 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 372 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 124 |
| Conread position: | 1-620 |
| Cow position: | chr29:16345360-16345973 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 399 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 34, 94 |
| Conread position: | 6-571 |
| Cow position: | chr29:27332461-27331921 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 374 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 13-620 |
| Cow position: | chr29:23977286-23977885 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 394 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 30-607 |
| Cow position: | chr29:24335818-24335254 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 385 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 45-620 |
| Cow position: | chr29:36635191-36634622 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 362 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 203-620 |
| Cow position: | chr29:5236356-5236786 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 206-620 |
| Cow position: | chr29:409910-409500 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 206-620 |
| Cow position: | chr29:19654966-19655380 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 163, 20 |
| Conread position: | 214-629 |
| Cow position: | chr29:647151-647578 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 156 |
| Conread position: | 219-620 |
| Cow position: | chr29:2101192-2101600 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 108, 11 |
| Conread position: | 267-576 |
| Cow position: | chr29:16661402-16661715 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 53 |
| Conread position: | 267-620 |
| Cow position: | chr29:2691557-2691924 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 94 |
| Conread position: | 267-620 |
| Cow position: | chr29:7845784-7846152 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 267-620 |
| Cow position: | chr29:10022938-10022570 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 267-620 |
| Cow position: | chr29:13583475-13583843 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 267-620 |
| Cow position: | chr29:19526892-19526524 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-620 |
| Cow position: | chr29:27180359-27179991 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 267-620 |
| Cow position: | chr29:31182802-31183164 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-627 |
| Cow position: | chr29:4633230-4632871 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 112 |
| Conread position: | 267-628 |
| Cow position: | chr29:21431457-21431082 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 271-620 |
| Cow position: | chr29:27979522-27979159 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 62, 192 |
| Conread position: | 271-629 |
| Cow position: | chr29:44601199-44600848 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 271-631 |
| Cow position: | chr29:37165491-37165851 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 38 |
| Conread position: | 272-500 |
| Cow position: | chr29:38619477-38619239 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 91, 58 |
| Conread position: | 277-553 |
| Cow position: | chr29:23905240-23905509 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 277-612 |
| Cow position: | chr29:35298314-35298664 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 283 |
| Conread position: | 277-630 |
| Cow position: | chr29:31547271-31546912 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 285-646 |
| Cow position: | chr29:9877098-9876721 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 7, 195 |
| Conread position: | 291-620 |
| Cow position: | chr29:43324937-43325279 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 34, 273 |
| Conread position: | 291-626 |
| Cow position: | chr29:3176019-3175684 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 19 |
| Conread position: | 349-629 |
| Cow position: | chr29:40612388-40612103 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 413-620 |
| Cow position: | chr29:609094-608886 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 413-628 |
| Cow position: | chr29:42204651-42204867 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 420-629 |
| Cow position: | chr29:26215843-26216047 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 50 |
| Conread position: | 448-620 |
| Cow position: | chr29:2073697-2073870 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.