Cow genome map

Conread name: Liv1-LVRM1D040208

Conread position: 1-619
Cow position: chr3:64016306-64015706 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 386
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 110

Conread position: 1-620
Cow position: chr3:53516668-53517287 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 379
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 88

Conread position: 1-620
Cow position: chr3:56100617-56100010 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 392
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 21

Conread position: 4-619
Cow position: chr3:36877589-36876983 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 382
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 107

Conread position: 4-620
Cow position: chr3:57483660-57483048 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 390
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 136

Conread position: 13-620
Cow position: chr3:21181620-21181020 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 394
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 155

Conread position: 22-566
Cow position: chr3:53412215-53412752 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 359
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 87

Conread position: 31-620
Cow position: chr3:5993990-5993410 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 365
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 198, 79

Conread position: 31-620
Cow position: chr3:45975594-45976177 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 363
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 58

Conread position: 31-628
Cow position: chr3:19720581-19719972 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 377
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 238, 89

Conread position: 31-628
Cow position: chr3:19939988-19940615 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 391
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 20

Conread position: 32-397
Cow position: chr3:25783536-25783193 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 109, 45

Conread position: 196-620
Cow position: chr3:6687027-6687465 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 271
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 203-620
Cow position: chr3:2709616-2709192 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 278
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 15, 44

Conread position: 203-620
Cow position: chr3:30315800-30316225 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 277
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 44

Conread position: 203-620
Cow position: chr3:40824643-40825070 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 285
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 44

Conread position: 203-620
Cow position: chr3:72631317-72631734 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 267
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 44

Conread position: 203-620
Cow position: chr3:78026162-78025744 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 277
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 44

Conread position: 206-620
Cow position: chr3:595391-595804 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 273
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 126, 40

Conread position: 206-621
Cow position: chr3:48058107-48057682 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 283
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 41

Conread position: 206-628
Cow position: chr3:5952927-5952498 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 286
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 23, 41

Conread position: 207-620
Cow position: chr3:23289079-23288656 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 277
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 40

Conread position: 220-620
Cow position: chr3:19755685-19755286 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 264
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 150, 12

Conread position: 237-620
Cow position: chr3:16224165-16224563 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 254
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 255-625
Cow position: chr3:79122301-79121926 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 7

Conread position: 267-620
Cow position: chr3:1742641-1743009 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 267-620
Cow position: chr3:2368027-2367661 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 231
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 265

Conread position: 267-620
Cow position: chr3:2870098-2870466 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 267-620
Cow position: chr3:2918779-2919142 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 267-620
Cow position: chr3:4287399-4287764 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 236
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 267-620
Cow position: chr3:24644534-24644891 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 130, 36

Conread position: 267-620
Cow position: chr3:29575814-29575446 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 267-620
Cow position: chr3:64651947-64652286 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 226
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 230, 67

Conread position: 267-620
Cow position: chr3:68698663-68698297 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 232
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 61, 272

Conread position: 267-620
Cow position: chr3:68891260-68890899 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 85

Conread position: 267-624
Cow position: chr3:82638405-82638773 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 101, 54

Conread position: 267-628
Cow position: chr3:3524325-3524700 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 103, 67

Conread position: 267-628
Cow position: chr3:6783677-6784054 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 240
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 267-628
Cow position: chr3:37970356-37970734 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 246
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 267-628
Cow position: chr3:44925372-44925752 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 247
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 256

Conread position: 271-620
Cow position: chr3:7313160-7312799 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 55, 103

Conread position: 271-629
Cow position: chr3:19799858-19799492 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 229
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 272-620
Cow position: chr3:34506029-34505675 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 235
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 64

Conread position: 277-620
Cow position: chr3:3840197-3839840 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 232
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 231

Conread position: 277-620
Cow position: chr3:24457865-24457503 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 204

Conread position: 277-620
Cow position: chr3:45034059-45034417 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 277-632
Cow position: chr3:62503445-62503813 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 254

Conread position: 278-522
Cow position: chr3:65207900-65207643 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 56

Conread position: 285-620
Cow position: chr3:54291251-54290904 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 222
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 60

Conread position: 291-620
Cow position: chr3:36863124-36862780 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 221
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 291-620
Cow position: chr3:56295520-56295863 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 221
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 37, 51

Conread position: 294-619
Cow position: chr3:19945581-19945927 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 321-630
Cow position: chr3:45983060-45982743 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 228

Conread position: 328-627
Cow position: chr3:70197593-70197911 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 281

Conread position: 346-630
Cow position: chr3:63946535-63946818 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 37

Conread position: 351-575
Cow position: chr3:42053273-42053046 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 27

Conread position: 361-627
Cow position: chr3:57979000-57978737 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 15

Conread position: 392-630
Cow position: chr3:71205876-71206114 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 11

Conread position: 395-615
Cow position: chr3:31319813-31320029 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 73

Conread position: 395-626
Cow position: chr3:23944085-23943854 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 108, 32

Conread position: 399-620
Cow position: chr3:58784700-58784478 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 403-620
Cow position: chr3:21028158-21027940 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 94, 150

Conread position: 403-620
Cow position: chr3:43191832-43191614 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 403-620
Cow position: chr3:51857231-51857013 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 88

Conread position: 403-629
Cow position: chr3:8438500-8438719 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 150

Conread position: 408-630
Cow position: chr3:58167140-58167363 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 408-630
Cow position: chr3:69099375-69099156 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 408-630
Cow position: chr3:78908522-78908302 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 55, 46

Conread position: 413-620
Cow position: chr3:20382506-20382713 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 42

Conread position: 422-553
Cow position: chr3:12689194-12689060 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 114

Conread position: 422-628
Cow position: chr3:4736447-4736242 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 106

Show alignments to all cow chromosomes.