Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 4-620 |
| Cow position: | chr4:26876904-26876307 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 402 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 30, 143 |
| Conread position: | 31-577 |
| Cow position: | chr4:6615219-6614689 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 352 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 326, 91 |
| Conread position: | 31-627 |
| Cow position: | chr4:42405511-42406103 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 392 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 133, 94 |
| Conread position: | 37-518 |
| Cow position: | chr4:37529-37070 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 147, 85 |
| Conread position: | 193-619 |
| Cow position: | chr4:22027413-22026974 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 203-620 |
| Cow position: | chr4:43882164-43882583 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 203-620 |
| Cow position: | chr4:57985046-57985472 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 206-620 |
| Cow position: | chr4:17924904-17924480 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 272 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 206-626 |
| Cow position: | chr4:54152550-54152129 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 159, 21 |
| Conread position: | 266-504 |
| Cow position: | chr4:47486428-47486678 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 267-573 |
| Cow position: | chr4:20804692-20804988 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 10 |
| Conread position: | 267-620 |
| Cow position: | chr4:9355495-9355860 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 109, 57 |
| Conread position: | 267-620 |
| Cow position: | chr4:14386934-14387303 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-620 |
| Cow position: | chr4:17502218-17501850 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-620 |
| Cow position: | chr4:18423403-18423041 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 287 |
| Conread position: | 267-620 |
| Cow position: | chr4:28653379-28653014 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-621 |
| Cow position: | chr4:952062-952419 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 267-629 |
| Cow position: | chr4:30472326-30472703 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 268-620 |
| Cow position: | chr4:65665280-65664931 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 60, 147 |
| Conread position: | 271-591 |
| Cow position: | chr4:38930507-38930836 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 86, 54 |
| Conread position: | 271-619 |
| Cow position: | chr4:44780103-44779741 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 208 |
| Conread position: | 271-620 |
| Cow position: | chr4:52963015-52962655 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 127, 43 |
| Conread position: | 271-630 |
| Cow position: | chr4:47462939-47463305 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 54, 195 |
| Conread position: | 277-620 |
| Cow position: | chr4:1929512-1929161 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 280-553 |
| Cow position: | chr4:13871110-13871382 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 291-620 |
| Cow position: | chr4:33071697-33071358 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 267 |
| Conread position: | 292-620 |
| Cow position: | chr4:6865369-6865027 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 323-514 |
| Cow position: | chr4:67351956-67352149 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 326-620 |
| Cow position: | chr4:67651106-67650803 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 297 |
| Conread position: | 379-630 |
| Cow position: | chr4:12459330-12459083 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 387-626 |
| Cow position: | chr4:65041388-65041148 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 169 |
| Conread position: | 403-615 |
| Cow position: | chr4:17244369-17244582 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 403-630 |
| Cow position: | chr4:13266548-13266324 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 403-630 |
| Cow position: | chr4:13958433-13958662 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 408-629 |
| Cow position: | chr4:68837730-68837507 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 60 |
| Conread position: | 410-629 |
| Cow position: | chr4:37949599-37949368 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 413-620 |
| Cow position: | chr4:530691-530899 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 413-620 |
| Cow position: | chr4:6267918-6267710 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 84, 133 |
| Conread position: | 413-629 |
| Cow position: | chr4:49939159-49938942 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 147 |
| Conread position: | 422-620 |
| Cow position: | chr4:827490-827689 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 69 |
| Conread position: | 423-612 |
| Cow position: | chr4:29299137-29299319 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 433-570 |
| Cow position: | chr4:30978520-30978386 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 91 |
Show alignments to all cow chromosomes.