Cow genome map

Conread name: Liv1-LVRM1D040208

Conread position: 1-550
Cow position: chr5:44219015-44219564 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 376
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 39, 71

Conread position: 1-619
Cow position: chr5:55628962-55629566 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 382
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 110

Conread position: 1-620
Cow position: chr5:10855846-10855234 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 398
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 67

Conread position: 3-617
Cow position: chr5:34287248-34286656 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 398
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 31, 19

Conread position: 4-628
Cow position: chr5:18560432-18559815 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 411
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 132

Conread position: 9-620
Cow position: chr5:30580318-30580919 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 397
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 37

Conread position: 13-628
Cow position: chr5:40789051-40789649 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 390
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 79

Conread position: 31-628
Cow position: chr5:2915451-2916029 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 377
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 48, 36

Conread position: 45-630
Cow position: chr5:2325539-2324953 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 374
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 38

Conread position: 125-628
Cow position: chr5:24295693-24296196 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 328
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 7

Conread position: 160-620
Cow position: chr5:35527048-35527508 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 288
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 25

Conread position: 201-620
Cow position: chr5:18887401-18886970 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 283
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 27

Conread position: 203-625
Cow position: chr5:4070378-4070807 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 282
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 26, 44

Conread position: 204-620
Cow position: chr5:10919998-10920419 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 281
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 43

Conread position: 204-620
Cow position: chr5:40923488-40923092 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 268
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 273, 50

Conread position: 206-620
Cow position: chr5:24099821-24100233 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 271
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 41

Conread position: 206-620
Cow position: chr5:46737429-46737010 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 272
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 41

Conread position: 206-624
Cow position: chr5:31100268-31099848 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 280
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 41

Conread position: 207-616
Cow position: chr5:23230150-23230558 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 271
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 150, 11

Conread position: 211-619
Cow position: chr5:13046815-13047221 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 263
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 121

Conread position: 236-517
Cow position: chr5:62202838-62203126 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 100, 47

Conread position: 255-573
Cow position: chr5:55834602-55834275 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 62

Conread position: 266-577
Cow position: chr5:48736990-48736677 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 136

Conread position: 267-620
Cow position: chr5:4017982-4017630 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 66, 148

Conread position: 267-620
Cow position: chr5:4386453-4386806 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 227
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 315

Conread position: 267-620
Cow position: chr5:5104438-5104799 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 229
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 94

Conread position: 267-620
Cow position: chr5:10775047-10774679 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 205

Conread position: 267-620
Cow position: chr5:10813534-10813166 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 267-620
Cow position: chr5:10842165-10841796 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 66, 292

Conread position: 267-620
Cow position: chr5:12731498-12731131 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 88

Conread position: 267-620
Cow position: chr5:18121266-18120898 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 267-620
Cow position: chr5:23959113-23958746 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 10

Conread position: 267-620
Cow position: chr5:32773981-32774349 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 267-628
Cow position: chr5:987852-987473 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 249
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 267-628
Cow position: chr5:46628165-46627807 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 161

Conread position: 267-628
Cow position: chr5:59061854-59062231 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 248
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 0

Conread position: 267-632
Cow position: chr5:35301314-35301694 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 246
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 271-620
Cow position: chr5:4684584-4684221 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 231
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 271-630
Cow position: chr5:674155-674508 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 82

Conread position: 272-575
Cow position: chr5:28242253-28242553 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 140, 58

Conread position: 277-619
Cow position: chr5:76053314-76052973 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 227
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 68

Conread position: 277-625
Cow position: chr5:5305811-5306146 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 222
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 133, 37

Conread position: 280-632
Cow position: chr5:75624921-75625291 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 249
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 58, 0

Conread position: 283-514
Cow position: chr5:21918650-21918874 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 83

Conread position: 285-563
Cow position: chr5:13743230-13742945 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 62

Conread position: 291-575
Cow position: chr5:25441497-25441788 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 39

Conread position: 291-620
Cow position: chr5:6587348-6587004 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 220
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 291-620
Cow position: chr5:31255711-31256045 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 28

Conread position: 293-630
Cow position: chr5:18549405-18549742 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 80, 119

Conread position: 296-620
Cow position: chr5:40131358-40131018 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 218
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 296-628
Cow position: chr5:1665180-1665521 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 11

Conread position: 322-626
Cow position: chr5:27892380-27892078 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 18

Conread position: 327-644
Cow position: chr5:23939202-23939520 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 31

Conread position: 385-626
Cow position: chr5:74474517-74474759 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 9, 199

Conread position: 389-625
Cow position: chr5:39992366-39992600 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 13

Conread position: 390-630
Cow position: chr5:14658098-14657858 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 395-612
Cow position: chr5:33282894-33282677 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 103, 10

Conread position: 395-620
Cow position: chr5:31122229-31122003 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 403-619
Cow position: chr5:34698016-34698234 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 408-603
Cow position: chr5:22839166-22838971 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 27

Conread position: 408-603
Cow position: chr5:51369641-51369445 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 413-620
Cow position: chr5:20108277-20108486 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 413-620
Cow position: chr5:37378502-37378710 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 413-626
Cow position: chr5:66860338-66860121 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 23

Conread position: 426-630
Cow position: chr5:66495698-66495901 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 45

Show alignments to all cow chromosomes.