Cow genome map
Conread name: | Liv1-LVRM1D040208 |
Conread position: | 1-550 |
Cow position: | chr5:44219015-44219564 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 376 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 39, 71 |
Conread position: | 1-619 |
Cow position: | chr5:55628962-55629566 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 382 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 33, 110 |
Conread position: | 1-620 |
Cow position: | chr5:10855846-10855234 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 398 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 33, 67 |
Conread position: | 3-617 |
Cow position: | chr5:34287248-34286656 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 398 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 31, 19 |
Conread position: | 4-628 |
Cow position: | chr5:18560432-18559815 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 411 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 30, 132 |
Conread position: | 9-620 |
Cow position: | chr5:30580318-30580919 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 397 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 22, 37 |
Conread position: | 13-628 |
Cow position: | chr5:40789051-40789649 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 390 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 6, 79 |
Conread position: | 31-628 |
Cow position: | chr5:2915451-2916029 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 377 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 48, 36 |
Conread position: | 45-630 |
Cow position: | chr5:2325539-2324953 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 374 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 76, 38 |
Conread position: | 125-628 |
Cow position: | chr5:24295693-24296196 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 328 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 59, 7 |
Conread position: | 160-620 |
Cow position: | chr5:35527048-35527508 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 288 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 12, 25 |
Conread position: | 201-620 |
Cow position: | chr5:18887401-18886970 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 283 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 14, 27 |
Conread position: | 203-625 |
Cow position: | chr5:4070378-4070807 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 282 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 26, 44 |
Conread position: | 204-620 |
Cow position: | chr5:10919998-10920419 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 281 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 14, 43 |
Conread position: | 204-620 |
Cow position: | chr5:40923488-40923092 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 268 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 273, 50 |
Conread position: | 206-620 |
Cow position: | chr5:24099821-24100233 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 271 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 12, 41 |
Conread position: | 206-620 |
Cow position: | chr5:46737429-46737010 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 272 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 12, 41 |
Conread position: | 206-624 |
Cow position: | chr5:31100268-31099848 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 280 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 16, 41 |
Conread position: | 207-616 |
Cow position: | chr5:23230150-23230558 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 271 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 150, 11 |
Conread position: | 211-619 |
Cow position: | chr5:13046815-13047221 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 263 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 13, 121 |
Conread position: | 236-517 |
Cow position: | chr5:62202838-62203126 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 204 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 100, 47 |
Conread position: | 255-573 |
Cow position: | chr5:55834602-55834275 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 219 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 13, 62 |
Conread position: | 266-577 |
Cow position: | chr5:48736990-48736677 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 208 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 59, 136 |
Conread position: | 267-620 |
Cow position: | chr5:4017982-4017630 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 228 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 66, 148 |
Conread position: | 267-620 |
Cow position: | chr5:4386453-4386806 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 227 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 58, 315 |
Conread position: | 267-620 |
Cow position: | chr5:5104438-5104799 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 229 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 61, 94 |
Conread position: | 267-620 |
Cow position: | chr5:10775047-10774679 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 239 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 61, 205 |
Conread position: | 267-620 |
Cow position: | chr5:10813534-10813166 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 240 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 267-620 |
Cow position: | chr5:10842165-10841796 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 238 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 66, 292 |
Conread position: | 267-620 |
Cow position: | chr5:12731498-12731131 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 237 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 66, 88 |
Conread position: | 267-620 |
Cow position: | chr5:18121266-18120898 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 242 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 267-620 |
Cow position: | chr5:23959113-23958746 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 243 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 61, 10 |
Conread position: | 267-620 |
Cow position: | chr5:32773981-32774349 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 238 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 267-628 |
Cow position: | chr5:987852-987473 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 249 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 267-628 |
Cow position: | chr5:46628165-46627807 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 242 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 71, 161 |
Conread position: | 267-628 |
Cow position: | chr5:59061854-59062231 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 248 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 267-632 |
Cow position: | chr5:35301314-35301694 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 246 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 271-620 |
Cow position: | chr5:4684584-4684221 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 231 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 271-630 |
Cow position: | chr5:674155-674508 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 241 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 91, 82 |
Conread position: | 272-575 |
Cow position: | chr5:28242253-28242553 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 203 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 140, 58 |
Conread position: | 277-619 |
Cow position: | chr5:76053314-76052973 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 227 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 88, 68 |
Conread position: | 277-625 |
Cow position: | chr5:5305811-5306146 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 222 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 133, 37 |
Conread position: | 280-632 |
Cow position: | chr5:75624921-75625291 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 249 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 283-514 |
Cow position: | chr5:21918650-21918874 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 162 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 42, 83 |
Conread position: | 285-563 |
Cow position: | chr5:13743230-13742945 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 189 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 47, 62 |
Conread position: | 291-575 |
Cow position: | chr5:25441497-25441788 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 201 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 108, 39 |
Conread position: | 291-620 |
Cow position: | chr5:6587348-6587004 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 220 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 291-620 |
Cow position: | chr5:31255711-31256045 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 225 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 21, 28 |
Conread position: | 293-630 |
Cow position: | chr5:18549405-18549742 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 230 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 80, 119 |
Conread position: | 296-620 |
Cow position: | chr5:40131358-40131018 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 218 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 296-628 |
Cow position: | chr5:1665180-1665521 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 231 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 38, 11 |
Conread position: | 322-626 |
Cow position: | chr5:27892380-27892078 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 202 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 14, 18 |
Conread position: | 327-644 |
Cow position: | chr5:23939202-23939520 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 223 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 38, 31 |
Conread position: | 385-626 |
Cow position: | chr5:74474517-74474759 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 161 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 9, 199 |
Conread position: | 389-625 |
Cow position: | chr5:39992366-39992600 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 158 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 33, 13 |
Conread position: | 390-630 |
Cow position: | chr5:14658098-14657858 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 167 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 395-612 |
Cow position: | chr5:33282894-33282677 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 146 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 103, 10 |
Conread position: | 395-620 |
Cow position: | chr5:31122229-31122003 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 148 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 403-619 |
Cow position: | chr5:34698016-34698234 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 144 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 408-603 |
Cow position: | chr5:22839166-22838971 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 135 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 89, 27 |
Conread position: | 408-603 |
Cow position: | chr5:51369641-51369445 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 413-620 |
Cow position: | chr5:20108277-20108486 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 143 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 413-620 |
Cow position: | chr5:37378502-37378710 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 141 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 413-626 |
Cow position: | chr5:66860338-66860121 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 150 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 28, 23 |
Conread position: | 426-630 |
Cow position: | chr5:66495698-66495901 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 142 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 77, 45 |
Show alignments to all cow chromosomes.