Cow genome map


           Conread name:
           Liv1-LVRM1D040208
        

               Conread position:
               1-550
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               376
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               39, 71
               

               Conread position:
               1-619
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               382
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 110
               

               Conread position:
               1-620
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               398
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               3-617
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               398
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               4-628
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               411
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 132
               

               Conread position:
               9-620
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               397
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               13-628
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               390
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               6, 79
               

               Conread position:
               31-628
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               377
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               45-630
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               374
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               76, 38
               

               Conread position:
               125-628
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               328
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               160-620
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               201-620
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               203-625
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               282
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               204-620
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               204-620
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               268
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               273, 50
               

               Conread position:
               206-620
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               206-620
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               206-624
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               207-616
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               150, 11
               

               Conread position:
               211-619
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               236-517
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               255-573
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               266-577
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               59, 136
               

               Conread position:
               267-620
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               66, 148
               

               Conread position:
               267-620
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               58, 315
               

               Conread position:
               267-620
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               61, 94
               

               Conread position:
               267-620
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               61, 205
               

               Conread position:
               267-620
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               267-620
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               66, 292
               

               Conread position:
               267-620
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               66, 88
               

               Conread position:
               267-620
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               267-620
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 10
               

               Conread position:
               267-620
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               267-628
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               267-628
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               71, 161
               

               Conread position:
               267-628
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               267-632
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               271-620
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               271-630
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               91, 82
               

               Conread position:
               272-575
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               140, 58
               

               Conread position:
               277-619
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 68
               

               Conread position:
               277-625
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 37
               

               Conread position:
               280-632
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               283-514
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 83
               

               Conread position:
               285-563
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               291-575
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 39
               

               Conread position:
               291-620
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               291-620
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               293-630
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               80, 119
               

               Conread position:
               296-620
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               296-628
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               322-626
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               14, 18
               

               Conread position:
               327-644
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               385-626
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               9, 199
               

               Conread position:
               389-625
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               390-630
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               395-612
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               103, 10
               

               Conread position:
               395-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               403-619
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               408-603
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 27
               

               Conread position:
               408-603
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               413-620
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               413-620
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               413-626
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               426-630
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 45
               
Show alignments to all cow chromosomes.