Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 1-541 |
| Cow position: | chr8:14583589-14583074 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 368 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 1-612 |
| Cow position: | chr8:5017569-5018168 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 397 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 149 |
| Conread position: | 1-620 |
| Cow position: | chr8:14590511-14589879 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 399 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 1-628 |
| Cow position: | chr8:39194828-39194203 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 411 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 2-620 |
| Cow position: | chr8:2235594-2234981 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 398 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 4-620 |
| Cow position: | chr8:12450416-12451039 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 405 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 30, 123 |
| Conread position: | 18-511 |
| Cow position: | chr8:17312435-17312943 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 119 |
| Conread position: | 22-620 |
| Cow position: | chr8:47947468-47948085 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 396 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 143-620 |
| Cow position: | chr8:41644176-41643688 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 311 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 203-612 |
| Cow position: | chr8:7162469-7162887 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 203-620 |
| Cow position: | chr8:35470873-35471300 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 203-620 |
| Cow position: | chr8:59261368-59260950 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 203-630 |
| Cow position: | chr8:7399530-7399110 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 203-631 |
| Cow position: | chr8:25523972-25524404 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 210-626 |
| Cow position: | chr8:24914739-24914316 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 211-620 |
| Cow position: | chr8:29008211-29008613 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 160, 35 |
| Conread position: | 211-626 |
| Cow position: | chr8:27718474-27718899 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 213-625 |
| Cow position: | chr8:49672215-49672625 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 151, 17 |
| Conread position: | 214-620 |
| Cow position: | chr8:3786214-3786628 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 111, 32 |
| Conread position: | 263-620 |
| Cow position: | chr8:51068371-51067999 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 267-611 |
| Cow position: | chr8:47490119-47490468 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 130, 47 |
| Conread position: | 267-618 |
| Cow position: | chr8:25377609-25377973 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 267-619 |
| Cow position: | chr8:2887383-2887749 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 267-620 |
| Cow position: | chr8:1347620-1347252 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 267-620 |
| Cow position: | chr8:34109511-34109876 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 252 |
| Conread position: | 267-620 |
| Cow position: | chr8:34349301-34349669 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-620 |
| Cow position: | chr8:37655925-37655557 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-620 |
| Cow position: | chr8:39820082-39820450 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 267-621 |
| Cow position: | chr8:50959979-50959614 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 267-626 |
| Cow position: | chr8:18054359-18054735 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 267-629 |
| Cow position: | chr8:37932726-37933103 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 215 |
| Conread position: | 267-630 |
| Cow position: | chr8:33091397-33091766 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 271-619 |
| Cow position: | chr8:19332208-19332570 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 54, 97 |
| Conread position: | 271-621 |
| Cow position: | chr8:41247810-41248169 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 272-573 |
| Cow position: | chr8:42154643-42154324 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 277-554 |
| Cow position: | chr8:14348120-14347844 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 79 |
| Conread position: | 280-618 |
| Cow position: | chr8:30486758-30486415 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 183 |
| Conread position: | 282-604 |
| Cow position: | chr8:32522613-32522948 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 291-620 |
| Cow position: | chr8:8516943-8516600 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 292-620 |
| Cow position: | chr8:30155757-30156099 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 292-620 |
| Cow position: | chr8:36920018-36920349 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 292-620 |
| Cow position: | chr8:47068161-47067818 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 326-630 |
| Cow position: | chr8:37093828-37093515 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 395-620 |
| Cow position: | chr8:9757185-9757408 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 395-620 |
| Cow position: | chr8:11776389-11776616 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 395-620 |
| Cow position: | chr8:42440178-42439952 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 395-620 |
| Cow position: | chr8:44108916-44109143 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 395-626 |
| Cow position: | chr8:3227113-3226885 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 122, 75 |
| Conread position: | 403-620 |
| Cow position: | chr8:11565528-11565746 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 403-620 |
| Cow position: | chr8:25774868-25774649 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 406-619 |
| Cow position: | chr8:44700766-44700979 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 409-538 |
| Cow position: | chr8:26911819-26911689 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 410-584 |
| Cow position: | chr8:33456915-33457082 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 410-616 |
| Cow position: | chr8:42870667-42870864 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 411-619 |
| Cow position: | chr8:46217966-46217758 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 142 |
| Conread position: | 424-629 |
| Cow position: | chr8:24190767-24190973 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.