Cow genome map
| Conread name: | Liv1-LVRM1D040208 |
| Conread position: | 1-620 |
| Cow position: | chr9:30673415-30674030 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 391 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 2-629 |
| Cow position: | chr9:46272162-46272777 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 410 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 32, 155 |
| Conread position: | 3-620 |
| Cow position: | chr9:5005009-5005636 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 389 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 3-628 |
| Cow position: | chr9:51181135-51180518 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 411 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 4-620 |
| Cow position: | chr9:6250342-6250935 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 388 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 4-629 |
| Cow position: | chr9:21110579-21111177 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 395 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 117, 69 |
| Conread position: | 4-641 |
| Cow position: | chr9:4283010-4283632 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 407 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 7-599 |
| Cow position: | chr9:46461003-46460439 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 377 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 31-620 |
| Cow position: | chr9:17304906-17304325 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 382 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 129, 79 |
| Conread position: | 31-629 |
| Cow position: | chr9:9647193-9647801 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 384 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 127-549 |
| Cow position: | chr9:20176544-20176144 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 198, 26 |
| Conread position: | 181-620 |
| Cow position: | chr9:27783393-27783836 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 206-620 |
| Cow position: | chr9:18508596-18508175 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 206-620 |
| Cow position: | chr9:21410528-21410956 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 206-620 |
| Cow position: | chr9:31808812-31809226 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 214-620 |
| Cow position: | chr9:27036139-27036551 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 31 |
| Conread position: | 214-630 |
| Cow position: | chr9:867408-866988 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 224-620 |
| Cow position: | chr9:9014319-9014721 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 227-548 |
| Cow position: | chr9:35594836-35594503 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 40 |
| Conread position: | 261-629 |
| Cow position: | chr9:26567879-26568255 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 71, 253 |
| Conread position: | 267-619 |
| Cow position: | chr9:38677430-38677794 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 65 |
| Conread position: | 267-620 |
| Cow position: | chr9:3309899-3310265 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 267-620 |
| Cow position: | chr9:8781626-8781277 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 61, 149 |
| Conread position: | 267-620 |
| Cow position: | chr9:50093954-50093586 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 267-620 |
| Cow position: | chr9:50791996-50792366 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-620 |
| Cow position: | chr9:64015387-64015021 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 267-628 |
| Cow position: | chr9:27935663-27936042 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 267-628 |
| Cow position: | chr9:47043243-47043622 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 267-631 |
| Cow position: | chr9:30828024-30828405 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 271-629 |
| Cow position: | chr9:22436254-22436610 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 65, 114 |
| Conread position: | 272-620 |
| Cow position: | chr9:13119013-13118658 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 53, 77 |
| Conread position: | 272-620 |
| Cow position: | chr9:31066006-31066369 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 277-633 |
| Cow position: | chr9:10547950-10548314 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 86, 39 |
| Conread position: | 280-620 |
| Cow position: | chr9:54925835-54926185 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 183 |
| Conread position: | 285-620 |
| Cow position: | chr9:4308060-4307714 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 291-545 |
| Cow position: | chr9:8167859-8167604 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 291-620 |
| Cow position: | chr9:1250690-1250347 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 293-620 |
| Cow position: | chr9:779510-779171 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 35, 230 |
| Conread position: | 299-628 |
| Cow position: | chr9:64026756-64027091 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 53, 37 |
| Conread position: | 400-628 |
| Cow position: | chr9:6709388-6709620 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 402-603 |
| Cow position: | chr9:49515049-49514851 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 95, 49 |
| Conread position: | 403-620 |
| Cow position: | chr9:10976548-10976766 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 408-620 |
| Cow position: | chr9:9462384-9462172 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 413-624 |
| Cow position: | chr9:17069484-17069271 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 423-629 |
| Cow position: | chr9:56302999-56302792 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 423-629 |
| Cow position: | chr9:59509708-59509498 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 424-629 |
| Cow position: | chr9:29044309-29044103 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.