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Cow genome map

           
Conread name:
           
Liv1-LVRM1G030208
        

               
Conread position:
               
1-132
               

               
Cow position:
               
chr12:9894771-9894644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr12:4719936-4719791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr12:23855828-23855682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr12:15050627-15050775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr12:38184583-38184439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr12:23916835-23916681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr12:41215892-41216064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr12:11587763-11587586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 69
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr12:10491261-10491090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr12:25452458-25452655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr12:45680266-45680054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr12:33851350-33851141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr12:22540196-22539979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr12:1030969-1030751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr12:12030839-12031075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 151
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr12:43582764-43582538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 81
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr12:23798090-23797855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
198, 56
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr12:24559347-24559105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr12:28213499-28213270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr12:42282850-42283085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
193, 58
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr12:43351821-43351592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr12:30661961-30662214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr12:8868886-8869172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 147
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr12:7000614-7000881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
249, 63
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr12:5714619-5714336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 147
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr12:25561359-25561078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
248, 56
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr12:41474078-41473802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 57
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr12:3950356-3950645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
193, 95
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr12:22515743-22516030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr12:47804146-47803861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 105
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:3056122-3055841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
198, 73
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:6241308-6241014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:8943235-8943515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
248, 42
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:18577828-18577555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
249, 73
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:19508570-19508867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 152
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:22882045-22881757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:27563388-27563672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 83
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:34007296-34007004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:35368631-35368348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
247, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:41581103-41580822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
172, 52
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr12:9914778-9914493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
238, 57
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr12:33323507-33323794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
144, 57
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr12:3197258-3196954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr12:27803061-27803348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr12:18123658-18123386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
249, 46
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr12:30753709-30753426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
248, 53
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr12:36313841-36313562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
246, 57
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr12:30805842-30805552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
189, 59
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr12:15173812-15173515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
198, 59
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr12:40910300-40910594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 83
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr12:19691242-19691540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
65, 149
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr12:19869452-19869166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
249, 25
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr12:30438229-30437946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
249, 59
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr12:44905621-44905332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
180, 58
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr12:19866228-19865936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
249, 53
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr12:34385518-34385820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr12:42254656-42254351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr12:6210169-6210468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr12:6410746-6411045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
238, 54
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr12:41159579-41159276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
197, 63
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr12:28582515-28582979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 60
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr12:3623682-3623539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr12:18963940-18964158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr12:4162375-4162606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr12:40028766-40028997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr12:23574751-23574524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr12:35779937-35780174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
197, 56
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr12:5635465-5635696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr12:12699776-12700023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr12:17774782-17774557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr12:44595822-44596062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
192, 56
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr12:18765985-18766254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr12:1505011-1504739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr12:28010920-28011191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
248, 41
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr12:31228560-31228285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
248, 58
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr12:5906044-5905762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
246, 134
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr12:19715048-19715322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 138
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr12:31532412-31532696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr12:42181141-42181436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr12:15938275-15938566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 182
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr12:29483898-29484190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 137
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr12:3510548-3510265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
190, 56
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr12:36500960-36501252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr12:7978028-7977742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 97
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr12:17881849-17881567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr12:5801028-5800732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr12:27562840-27563152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 23
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr12:42174404-42174240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
144, 57
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr12:3060100-3060310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr12:3057051-3056835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr12:3906461-3906239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr12:1773678-1773968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
3-453
               

               
Cow position:
               
chr12:33458136-33457706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 148
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr12:26223002-26223279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
184, 25
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr12:11583376-11583101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
244, 47
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr12:29995476-29995767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
244, 57
               

               
Conread position:
               
4-427
               

               
Cow position:
               
chr12:30590750-30590326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 56
               

               
Conread position:
               
4-508
               

               
Cow position:
               
chr12:15531044-15530573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
246, 53
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr12:29770587-29770817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr12:1443760-1444043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
187, 50
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr12:31959868-31959588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
242, 56
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr12:28748923-28748706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr12:15163121-15162921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr12:30210464-30210242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
9-237
               

               
Cow position:
               
chr12:30476463-30476240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
188, 64
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr12:42966981-42966706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr12:36012632-36012913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
174, 115
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr12:26782865-26782576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
183, 82
               

               
Conread position:
               
9-299
               

               
Cow position:
               
chr12:4116470-4116199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
215, 51
               

               
Conread position:
               
9-498
               

               
Cow position:
               
chr12:5658096-5658567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
172, 48
               

               
Conread position:
               
10-236
               

               
Cow position:
               
chr12:13996044-13996271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr12:3039491-3039219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 174
               

               
Conread position:
               
10-297
               

               
Cow position:
               
chr12:3568921-3568641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
240, 41
               

               
Conread position:
               
11-302
               

               
Cow position:
               
chr12:24032984-24032697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
12-193
               

               
Cow position:
               
chr12:5639125-5638947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
12-304
               

               
Cow position:
               
chr12:19039632-19039922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
13-246
               

               
Cow position:
               
chr12:24211390-24211170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
13-281
               

               
Cow position:
               
chr12:22047447-22047180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
187, 48
               

               
Conread position:
               
13-285
               

               
Cow position:
               
chr12:2286560-2286288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
181, 45
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr12:10895576-10895843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr12:11836211-11835947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
43, 101
               

               
Conread position:
               
13-302
               

               
Cow position:
               
chr12:2241912-2242194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 58
               

               
Conread position:
               
14-282
               

               
Cow position:
               
chr12:15358310-15358038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
183, 60
               

               
Conread position:
               
14-285
               

               
Cow position:
               
chr12:2512503-2512235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
231, 44
               

               
Conread position:
               
14-285
               

               
Cow position:
               
chr12:6164046-6164322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr12:18420946-18421221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr12:35771045-35771328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
14-292
               

               
Cow position:
               
chr12:30170645-30170368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
235, 46
               

               
Conread position:
               
14-292
               

               
Cow position:
               
chr12:31429592-31429859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
236, 134
               

               
Conread position:
               
15-224
               

               
Cow position:
               
chr12:18021567-18021368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
15-224
               

               
Cow position:
               
chr12:44559561-44559361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
172, 12
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr12:25820455-25820662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
15-233
               

               
Cow position:
               
chr12:38511861-38512075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
15-237
               

               
Cow position:
               
chr12:24577276-24577491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
15-243
               

               
Cow position:
               
chr12:4182716-4182939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
179, 47
               

               
Conread position:
               
15-277
               

               
Cow position:
               
chr12:41214346-41214603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
235, 81
               

               
Conread position:
               
15-285
               

               
Cow position:
               
chr12:24440790-24440519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
199, 46
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr12:18937381-18937082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 224
               

               
Conread position:
               
15-300
               

               
Cow position:
               
chr12:941615-941326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
15-308
               

               
Cow position:
               
chr12:6720302-6720007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 135
               

               
Conread position:
               
15-344
               

               
Cow position:
               
chr12:45820391-45820707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
178, 96
               

               
Conread position:
               
15-496
               

               
Cow position:
               
chr12:25456094-25455607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 66
               

               
Conread position:
               
15-498
               

               
Cow position:
               
chr12:28650932-28650446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
15-501
               

               
Cow position:
               
chr12:37770852-37770399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr12:20326746-20326466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
17-296
               

               
Cow position:
               
chr12:36954408-36954678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
18-273
               

               
Cow position:
               
chr12:25320892-25320642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 20
               

               
Conread position:
               
18-287
               

               
Cow position:
               
chr12:40807370-40807101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr12:4596433-4596224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 42
               

               
Conread position:
               
19-286
               

               
Cow position:
               
chr12:32391819-32391551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
231, 41
               

               
Conread position:
               
20-472
               

               
Cow position:
               
chr12:48415542-48415976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
21-214
               

               
Cow position:
               
chr12:6121332-6121140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
22-248
               

               
Cow position:
               
chr12:17702258-17702481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 115
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr12:32715014-32714792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
22-286
               

               
Cow position:
               
chr12:18020826-18020558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 36
               

               
Conread position:
               
25-287
               

               
Cow position:
               
chr12:20776956-20777224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
175, 205
               

               
Conread position:
               
28-287
               

               
Cow position:
               
chr12:6226690-6226926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
28-304
               

               
Cow position:
               
chr12:44767038-44766772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
222, 67
               

               
Conread position:
               
28-448
               

               
Cow position:
               
chr12:12938957-12939369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr12:45814306-45814569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
36-287
               

               
Cow position:
               
chr12:29694092-29694332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
173, 18
               

               
Conread position:
               
38-287
               

               
Cow position:
               
chr12:2805097-2805337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
183, 19
               

               
Conread position:
               
40-298
               

               
Cow position:
               
chr12:17472274-17472525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
210, 89
               

               
Conread position:
               
48-284
               

               
Cow position:
               
chr12:11109710-11109478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
202, 88
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr12:26868861-26869087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
135, 90
               

               
Conread position:
               
61-287
               

               
Cow position:
               
chr12:40158307-40158534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 88
               

               
Conread position:
               
64-292
               

               
Cow position:
               
chr12:12017806-12017577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
186, 39
               

               
Conread position:
               
65-283
               

               
Cow position:
               
chr12:31841369-31841150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
129, 84
               

               
Conread position:
               
66-248
               

               
Cow position:
               
chr12:29161889-29162059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
66-287
               

               
Cow position:
               
chr12:40270166-40270381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
184, 86
               

               
Conread position:
               
69-287
               

               
Cow position:
               
chr12:9229563-9229777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
181, 27
               

               
Conread position:
               
70-287
               

               
Cow position:
               
chr12:1848612-1848833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 66
               

               
Conread position:
               
70-294
               

               
Cow position:
               
chr12:36568138-36568352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
174, 79
               

               
Conread position:
               
73-287
               

               
Cow position:
               
chr12:35218485-35218699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
176, 77
               

               
Conread position:
               
75-282
               

               
Cow position:
               
chr12:4134588-4134375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
119, 74
               

               
Conread position:
               
77-285
               

               
Cow position:
               
chr12:42160631-42160846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 72
               

               
Conread position:
               
77-287
               

               
Cow position:
               
chr12:3076701-3076918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 72
               

               
Conread position:
               
77-296
               

               
Cow position:
               
chr12:30728320-30728545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
86-287
               

               
Cow position:
               
chr12:46635038-46635240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
163, 62
               

               
Conread position:
               
95-279
               

               
Cow position:
               
chr12:23154562-23154753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr12:9465560-9465755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 51
               

               
Conread position:
               
104-296
               

               
Cow position:
               
chr12:41083957-41083763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
104-298
               

               
Cow position:
               
chr12:19420041-19420237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
107-286
               

               
Cow position:
               
chr12:36118862-36118677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
108-493
               

               
Cow position:
               
chr12:14131852-14132250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
109-298
               

               
Cow position:
               
chr12:37123394-37123208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 40
               

               
Conread position:
               
112-302
               

               
Cow position:
               
chr12:7109072-7108877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
6, 40
               

               
Conread position:
               
252-497
               

               
Cow position:
               
chr12:10939393-10939148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
331-497
               

               
Cow position:
               
chr12:19125124-19125290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 18
               
Show alignments to all cow chromosomes.