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Cow genome map

           
Conread name:
           
Liv1-LVRM1G030208
        

               
Conread position:
               
1-145
               

               
Cow position:
               
chr18:5078779-5078920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:16997248-16997103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:52855049-52854901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr18:4952212-4952360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr18:30586227-30586375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr18:44027115-44026962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr18:22274843-22275002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr18:12273652-12273482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr18:51643371-51643540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr18:51676095-51676266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
144, 50
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr18:16686341-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr18:7109124-7108922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
185, 57
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:39623794-39623594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
190, 57
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr18:19896457-19896659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr18:47812465-47812253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr18:51392647-51392869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
195, 26
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr18:219334-219101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
50, 152
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr18:2480650-2480416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
180, 59
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr18:4495892-4496124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr18:29796434-29796666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr18:10322800-10322558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
179, 54
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr18:21205358-21205124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr18:22411617-22411859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr18:31672518-31672749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr18:32883301-32883059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
204, 54
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr18:33008057-33007814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
191, 144
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:3044443-3044165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
54, 133
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr18:47525402-47525122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr18:40759201-40758931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
249, 58
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:1585119-1585390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
66, 149
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:2270504-2270790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:11377359-11377078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
166, 60
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:22214482-22214199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
63, 114
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:32121073-32121347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
143, 58
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:36098206-36097914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:36458928-36458647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
249, 57
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:56159456-56159178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 56
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:11867331-11867063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
249, 57
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:22120891-22121170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
202, 61
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:25282559-25282843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:26535513-26535804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:267821-268100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
249, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:5766407-5766140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
249, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:5995464-5995183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
237, 112
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:18918964-18919242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
241, 60
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:19646169-19645886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
200, 71
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:21528397-21528116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
249, 59
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:29371861-29371579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
249, 54
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:33299898-33299609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
210, 142
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:45961277-45961548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
253, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:51405912-51406192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:56172016-56172309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:55499066-55498776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:3027365-3027656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
198, 148
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:48453682-48453399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
247, 59
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:51691468-51691761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
193, 56
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr18:7956142-7955853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr18:24957295-24957001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
249, 59
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:4381288-4380997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
237, 150
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:4182193-4182489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:6310078-6309781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:7487244-7486953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
229, 49
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:14586476-14586775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
140, 58
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:15025667-15025378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:17005254-17004951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 147
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:19193371-19193647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
249, 49
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:39001809-39002094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
249, 57
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr18:7359739-7359434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:29356630-29356930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
193, 154
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:42747586-42747287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 61
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr18:20127111-20127465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:36264778-36265272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 22
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr18:23424917-23424416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr18:26355034-26355521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 66
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr18:5632261-5632116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr18:18369368-18369566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr18:2863997-2864222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
54, 149
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr18:3211871-3211634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr18:48828781-48829021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr18:25984577-25984808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
171, 58
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr18:18592466-18592233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
192, 56
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr18:20481889-20482116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr18:51656049-51656335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
188, 55
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:2592171-2592456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
42, 148
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr18:32873585-32873298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:10861436-10861707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:13360054-13359773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:14815349-14815624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
248, 56
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:20174136-20174419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
248, 48
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:35636353-35636639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
245, 60
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:52635077-52635370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 201
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr18:6609865-6610151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
245, 58
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr18:55789001-55789288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
195, 55
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:11322589-11322292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:3180404-3180120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
248, 56
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:10656431-10656147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:28768359-28768068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
228, 78
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:43065523-43065210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
153, 89
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr18:4648754-4649039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
250, 54
               

               
Conread position:
               
2-501
               

               
Cow position:
               
chr18:33157812-33157324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr18:36183913-36184113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
193, 56
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr18:4668506-4668775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr18:39662771-39662500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
250, 57
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr18:48290449-48290727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
171, 11
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr18:46048744-46048464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
247, 48
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr18:15340453-15340674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr18:43020411-43020624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr18:4539889-4540161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 55
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr18:51757085-51756799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 56
               

               
Conread position:
               
4-493
               

               
Cow position:
               
chr18:1144192-1144671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 87
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr18:25206198-25206497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
245, 28
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr18:3709025-3708832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
7-204
               

               
Cow position:
               
chr18:52387455-52387662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
134, 56
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr18:55397298-55397025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr18:21102785-21103048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
251, 50
               

               
Conread position:
               
9-142
               

               
Cow position:
               
chr18:30295662-30295796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
9-164
               

               
Cow position:
               
chr18:35874064-35873913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr18:24945819-24946056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
188, 96
               

               
Conread position:
               
9-277
               

               
Cow position:
               
chr18:11691422-11691689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
190, 75
               

               
Conread position:
               
9-283
               

               
Cow position:
               
chr18:3166506-3166773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr18:9974342-9974612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
241, 51
               

               
Conread position:
               
9-286
               

               
Cow position:
               
chr18:24022374-24022095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 149
               

               
Conread position:
               
9-286
               

               
Cow position:
               
chr18:26586673-26586953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
185, 18
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr18:2608739-2609018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr18:8104956-8105232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr18:10576091-10575813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
172, 89
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr18:22275047-22275334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
221, 53
               

               
Conread position:
               
9-300
               

               
Cow position:
               
chr18:33606617-33606335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
240, 51
               

               
Conread position:
               
9-302
               

               
Cow position:
               
chr18:44262617-44262320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
39, 143
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr18:52632421-52632714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
179, 53
               

               
Conread position:
               
10-153
               

               
Cow position:
               
chr18:43555539-43555680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr18:34621375-34621663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
184, 86
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr18:19849771-19850035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
237, 142
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr18:37023568-37023845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr18:54658294-54658012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr18:56150661-56150945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr18:26998865-26998574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr18:29058513-29058794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
236, 7
               

               
Conread position:
               
13-313
               

               
Cow position:
               
chr18:4368794-4369097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
14-117
               

               
Cow position:
               
chr18:728016-727912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
14-284
               

               
Cow position:
               
chr18:55505388-55505115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr18:4796954-4796680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr18:38344790-38344515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 142
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr18:39434808-39434551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr18:16417722-16417993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
183, 47
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr18:7965213-7964932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
14-307
               

               
Cow position:
               
chr18:42479605-42479889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
180, 48
               

               
Conread position:
               
14-308
               

               
Cow position:
               
chr18:25647267-25647558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
42, 132
               

               
Conread position:
               
14-493
               

               
Cow position:
               
chr18:9365900-9365432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
15-184
               

               
Cow position:
               
chr18:45185736-45185563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
15-237
               

               
Cow position:
               
chr18:14871890-14872097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr18:35582117-35582344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
48, 134
               

               
Conread position:
               
15-250
               

               
Cow position:
               
chr18:29649706-29649936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
179, 51
               

               
Conread position:
               
15-285
               

               
Cow position:
               
chr18:19831290-19831010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr18:33407597-33407322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
233, 59
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr18:49161456-49161745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 45
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr18:18562556-18562837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
233, 43
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr18:19143529-19143815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr18:35827432-35827714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
181, 43
               

               
Conread position:
               
15-299
               

               
Cow position:
               
chr18:3158617-3158901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
15-305
               

               
Cow position:
               
chr18:52658392-52658113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
235, 49
               

               
Conread position:
               
15-313
               

               
Cow position:
               
chr18:11166961-11166663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
235, 44
               

               
Conread position:
               
16-267
               

               
Cow position:
               
chr18:1582291-1582543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
16-285
               

               
Cow position:
               
chr18:51443450-51443716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr18:12809833-12809617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr18:19761677-19761456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr18:47314302-47314589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
39, 138
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr18:55552945-55552666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
164, 45
               

               
Conread position:
               
17-498
               

               
Cow position:
               
chr18:11680702-11680227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr18:50382230-50381963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
232, 43
               

               
Conread position:
               
18-313
               

               
Cow position:
               
chr18:47868442-47868139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 52
               

               
Conread position:
               
19-266
               

               
Cow position:
               
chr18:28822993-28823229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
19-285
               

               
Cow position:
               
chr18:31586394-31586651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
231, 41
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chr18:47517240-47517503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
219, 42
               

               
Conread position:
               
20-218
               

               
Cow position:
               
chr18:18868730-18868530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
37, 133
               

               
Conread position:
               
20-287
               

               
Cow position:
               
chr18:16847670-16847409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
183, 129
               

               
Conread position:
               
20-298
               

               
Cow position:
               
chr18:41271061-41270788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
174, 41
               

               
Conread position:
               
20-498
               

               
Cow position:
               
chr18:39115154-39115628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
21-287
               

               
Cow position:
               
chr18:4666235-4666500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
21-498
               

               
Cow position:
               
chr18:42966840-42966375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 33
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr18:35076366-35076088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
22-492
               

               
Cow position:
               
chr18:51212157-51211710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
49, 101
               

               
Conread position:
               
25-227
               

               
Cow position:
               
chr18:53962662-53962461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr18:37382118-37382340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 126
               

               
Conread position:
               
25-287
               

               
Cow position:
               
chr18:21195371-21195628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
25-288
               

               
Cow position:
               
chr18:43564196-43563938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
29-298
               

               
Cow position:
               
chr18:30673675-30673939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
221, 30
               

               
Conread position:
               
30-287
               

               
Cow position:
               
chr18:31724911-31725173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
34-287
               

               
Cow position:
               
chr18:16227524-16227272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
165, 27
               

               
Conread position:
               
35-298
               

               
Cow position:
               
chr18:19159012-19159263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
209, 26
               

               
Conread position:
               
37-285
               

               
Cow position:
               
chr18:18957838-18958078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
39-248
               

               
Cow position:
               
chr18:33793660-33793466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
39-298
               

               
Cow position:
               
chr18:26286868-26286614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
157, 24
               

               
Conread position:
               
40-226
               

               
Cow position:
               
chr18:18815712-18815894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
40-290
               

               
Cow position:
               
chr18:48036734-48036489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
44-224
               

               
Cow position:
               
chr18:29188968-29188790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
46-288
               

               
Cow position:
               
chr18:36445388-36445142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
176, 14
               

               
Conread position:
               
49-287
               

               
Cow position:
               
chr18:3115409-3115171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
201, 15
               

               
Conread position:
               
49-298
               

               
Cow position:
               
chr18:6881403-6881637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
49-298
               

               
Cow position:
               
chr18:11233384-11233132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
51-318
               

               
Cow position:
               
chr18:23807925-23808192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
8, 99
               

               
Conread position:
               
53-248
               

               
Cow position:
               
chr18:21768576-21768385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
141, 96
               

               
Conread position:
               
54-285
               

               
Cow position:
               
chr18:13293455-13293223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
51, 96
               

               
Conread position:
               
62-298
               

               
Cow position:
               
chr18:5189752-5189978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
64-300
               

               
Cow position:
               
chr18:30341240-30341464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
131, 85
               

               
Conread position:
               
64-394
               

               
Cow position:
               
chr18:47930931-47931259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
186, 90
               

               
Conread position:
               
65-287
               

               
Cow position:
               
chr18:238410-238633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
185, 86
               

               
Conread position:
               
66-287
               

               
Cow position:
               
chr18:19619884-19619658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
66-300
               

               
Cow position:
               
chr18:35058271-35058040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
128, 83
               

               
Conread position:
               
66-497
               

               
Cow position:
               
chr18:39875327-39875753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
184, 82
               

               
Conread position:
               
71-287
               

               
Cow position:
               
chr18:9818765-9818548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
179, 72
               

               
Conread position:
               
73-294
               

               
Cow position:
               
chr18:20864915-20864688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
75-287
               

               
Cow position:
               
chr18:23447158-23447371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
175, 78
               

               
Conread position:
               
75-356
               

               
Cow position:
               
chr18:5647171-5646894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
175, 65
               

               
Conread position:
               
77-285
               

               
Cow position:
               
chr18:4624510-4624716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
173, 26
               

               
Conread position:
               
77-293
               

               
Cow position:
               
chr18:27388474-27388254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 73
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr18:24977443-24977665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
104-292
               

               
Cow position:
               
chr18:13172622-13172816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
106-288
               

               
Cow position:
               
chr18:22790181-22790364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
107-501
               

               
Cow position:
               
chr18:45576710-45577098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
108-292
               

               
Cow position:
               
chr18:45395896-45395708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
120-296
               

               
Cow position:
               
chr18:11832025-11831839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
135-501
               

               
Cow position:
               
chr18:727537-727167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
152-306
               

               
Cow position:
               
chr18:29065523-29065679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
169-498
               

               
Cow position:
               
chr18:4765439-4765764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
274, 28
               

               
Conread position:
               
194-498
               

               
Cow position:
               
chr18:23137383-23137679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
195-493
               

               
Cow position:
               
chr18:51271929-51272247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 99
               
Show alignments to all cow chromosomes.