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Cow genome map

           
Conread name:
           
Liv1-LVRM1G030208
        

               
Conread position:
               
1-124
               

               
Cow position:
               
chr22:18293741-18293858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr22:5837294-5837131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr22:3241675-3241859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr22:6096993-6097198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr22:32698788-32698585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
191, 57
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr22:16823127-16822928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:1849098-1848870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:15025086-15025298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr22:11458846-11458622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
196, 57
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr22:17125609-17125374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr22:5384679-5384443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr22:25629740-25629983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
195, 53
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr22:7164986-7164741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr22:13849425-13849663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
143, 69
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr22:14690947-14691189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
179, 58
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr22:16533098-16532867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr22:22223211-22222979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
198, 59
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:7851988-7851711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
193, 72
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr22:41270977-41271241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
202, 59
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr22:294909-295189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr22:40120852-40121132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr22:2627598-2627322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr22:1309706-1309983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr22:17294912-17295184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
249, 46
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr22:30269436-30269159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 124
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr22:39494173-39494461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr22:12968045-12968327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
249, 54
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr22:15490678-15490401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr22:22155629-22155343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr22:22860887-22861169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 53
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr22:37324568-37324289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
249, 50
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr22:1975638-1975353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
249, 147
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr22:8733314-8733581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
249, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:3960259-3960554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:3987540-3987252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
193, 54
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:4583585-4583310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:4988536-4988819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
196, 86
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:5337574-5337858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:6122880-6123155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
247, 52
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:8883039-8882764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
191, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:10303040-10302750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:14844592-14844314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
180, 38
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:19341225-19340942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
191, 27
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:22160750-22160461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
194, 144
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:23865494-23865202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 59
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:28665307-28665008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
143, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:29290115-29290396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:34726692-34726414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:45846167-45845867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
143, 57
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr22:31592828-31593122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr22:3950277-3949979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr22:10609382-10609067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
58, 245
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr22:25221871-25222165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr22:590363-590078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
180, 102
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr22:26184137-26184424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
249, 18
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr22:34475976-34476264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 194
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr22:29642138-29641843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
191, 57
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr22:30483939-30483646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
197, 49
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr22:36539639-36539932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr22:10631410-10631105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
139, 233
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr22:12681776-12682062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
249, 127
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr22:28071583-28071286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
169, 177
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr22:47741445-47741147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
197, 27
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:6622223-6622515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
249, 54
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:8324263-8323978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
197, 54
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:11613448-11613158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:17764406-17764105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
207, 154
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:21568021-21567733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
249, 59
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:23857070-23856778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
249, 50
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:23980184-23980489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 149
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:24734288-24734581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
237, 15
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:25205947-25206239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
189, 51
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:26134200-26134505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:27322338-27322049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
233, 58
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:27581468-27581177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:28370970-28370676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:32326823-32326531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr22:43291873-43292172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
193, 60
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr22:4075863-4076169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 231
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr22:15919616-15919906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
190, 43
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr22:16273664-16273363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
57, 149
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr22:34712750-34712443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 218
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr22:11130894-11130604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
249, 142
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr22:42612483-42612185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
193, 95
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr22:44180617-44180320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
250, 117
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:1265900-1266209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr22:10339091-10339387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr22:37029580-37029882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr22:534523-534195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 59
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr22:38980919-38980601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
248, 59
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr22:16057726-16057392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
244, 52
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:19047791-19048180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
61, 148
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr22:34750699-34750265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 64
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr22:10421056-10420617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 105
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr22:27224151-27223710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
252, 39
               

               
Conread position:
               
2-153
               

               
Cow position:
               
chr22:27681740-27681589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 68
               

               
Conread position:
               
2-153
               

               
Cow position:
               
chr22:40789589-40789443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr22:31153976-31153815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr22:27835558-27835384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr22:26969806-26969615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr22:2523985-2523768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:27274677-27274895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
190, 30
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr22:3965209-3964935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
141, 58
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr22:16621199-16620920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
240, 60
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr22:4990144-4990427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
132, 74
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr22:26786377-26786097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr22:27577766-27577475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr22:33448058-33448333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
248, 27
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr22:1279362-1279645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
211, 65
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr22:27819032-27818744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr22:28351633-28351915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
173, 70
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr22:30955050-30954780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
248, 40
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr22:14376389-14376653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
248, 59
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr22:20626860-20626581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
248, 56
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr22:25246934-25246650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr22:40374632-40374346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
248, 58
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr22:41829217-41829493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
196, 56
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr22:40349367-40349093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
248, 56
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr22:33414998-33415275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr22:21295701-21295988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
248, 116
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr22:34398433-34398719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
248, 56
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr22:23758989-23759280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
194, 67
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr22:37201872-37201589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
220, 59
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr22:22022912-22022619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
170, 58
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr22:5290873-5290574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr22:8412549-8412254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr22:8840628-8840317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr22:9372544-9372250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
146, 68
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr22:10161990-10161695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr22:14924709-14924994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
192, 55
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr22:16251547-16251833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
248, 57
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr22:25943498-25943211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr22:32661533-32661246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr22:36545902-36546202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
188, 58
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr22:1326442-1326146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr22:26339777-26339486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
248, 58
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr22:27328871-27329158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
248, 25
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr22:30049543-30049853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 154
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr22:28058027-28058321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr22:9521166-9520863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
2-497
               

               
Cow position:
               
chr22:19775409-19775888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr22:23854996-23854506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 15
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr22:30964151-30963676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr22:10677968-10678177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr22:1640278-1640522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr22:16044394-16044685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 150
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr22:2502848-2502580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
247, 57
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr22:14178805-14179091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr22:21012407-21012130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
247, 55
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr22:23804954-23805244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr22:21890334-21890629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr22:877537-877252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 61
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr22:19787655-19787956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
88, 146
               

               
Conread position:
               
3-498
               

               
Cow position:
               
chr22:26659073-26658569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 51
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr22:10632937-10632702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
193, 79
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr22:32651525-32651251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
141, 56
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr22:13866685-13866387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 203
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr22:853042-852769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
246, 57
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr22:23181021-23181294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
170, 56
               

               
Conread position:
               
4-497
               

               
Cow position:
               
chr22:23833313-23832840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 102
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr22:7913497-7913222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr22:41044893-41045174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr22:13769491-13769221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr22:2403902-2403607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
5-339
               

               
Cow position:
               
chr22:24175868-24176188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
7-164
               

               
Cow position:
               
chr22:15020380-15020534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr22:3533954-3533754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr22:7967726-7967439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 153
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr22:24066211-24066495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr22:226436-226706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
243, 84
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr22:11500797-11500512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 64
               

               
Conread position:
               
7-302
               

               
Cow position:
               
chr22:41245266-41244972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 142
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr22:22146249-22146011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
185, 61
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr22:4974407-4974648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
9-280
               

               
Cow position:
               
chr22:6754251-6754508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
9-280
               

               
Cow position:
               
chr22:30710419-30710149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 150
               

               
Conread position:
               
9-286
               

               
Cow position:
               
chr22:3301323-3301581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
193, 61
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr22:7153900-7153629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
241, 51
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr22:14091207-14091491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr22:25742933-25743213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 82
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr22:6215540-6215818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr22:9977826-9977552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
242, 31
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr22:23830946-23830662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr22:34441617-34441905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
9-299
               

               
Cow position:
               
chr22:26097603-26097884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
230, 48
               

               
Conread position:
               
9-300
               

               
Cow position:
               
chr22:18926372-18926079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
9-497
               

               
Cow position:
               
chr22:21355125-21355593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
169, 57
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr22:12389114-12388908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
134, 163
               

               
Conread position:
               
10-292
               

               
Cow position:
               
chr22:21746660-21746375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
134, 186
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr22:11697179-11697475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
10-302
               

               
Cow position:
               
chr22:28179873-28179569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 181
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr22:19308323-19308657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
235, 52
               

               
Conread position:
               
10-467
               

               
Cow position:
               
chr22:13701950-13702393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
171, 10
               

               
Conread position:
               
13-153
               

               
Cow position:
               
chr22:8090516-8090654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
13-228
               

               
Cow position:
               
chr22:12315823-12315617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
13-228
               

               
Cow position:
               
chr22:23121994-23122220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
13-248
               

               
Cow position:
               
chr22:23403634-23403854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr22:5042326-5042059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
231, 40
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr22:13286467-13286183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
51, 132
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr22:33094575-33094301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
237, 61
               

               
Conread position:
               
13-292
               

               
Cow position:
               
chr22:13841152-13840878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
13-292
               

               
Cow position:
               
chr22:45513507-45513784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
13-296
               

               
Cow position:
               
chr22:10919840-10920134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr22:32895232-32894933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
13-308
               

               
Cow position:
               
chr22:39293731-39294023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 85
               

               
Conread position:
               
13-497
               

               
Cow position:
               
chr22:35533339-35533809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
14-208
               

               
Cow position:
               
chr22:11497212-11497017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
135, 56
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr22:12829601-12829795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
14-248
               

               
Cow position:
               
chr22:4993906-4994134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
167, 43
               

               
Conread position:
               
14-248
               

               
Cow position:
               
chr22:42684920-42684687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
14-248
               

               
Cow position:
               
chr22:47555862-47555631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
14-286
               

               
Cow position:
               
chr22:864504-864777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
120, 130
               

               
Conread position:
               
14-290
               

               
Cow position:
               
chr22:59622-59344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 46
               

               
Conread position:
               
14-292
               

               
Cow position:
               
chr22:1974138-1974415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
160, 38
               

               
Conread position:
               
14-292
               

               
Cow position:
               
chr22:46567880-46568153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
225, 47
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr22:26141289-26141008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
178, 135
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr22:13670160-13670440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
236, 44
               

               
Conread position:
               
14-297
               

               
Cow position:
               
chr22:27480904-27480622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
236, 47
               

               
Conread position:
               
14-299
               

               
Cow position:
               
chr22:6202926-6202642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
167, 38
               

               
Conread position:
               
14-308
               

               
Cow position:
               
chr22:6360475-6360770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
14-316
               

               
Cow position:
               
chr22:9127419-9127117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
44, 29
               

               
Conread position:
               
14-496
               

               
Cow position:
               
chr22:15568005-15568483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
15-204
               

               
Cow position:
               
chr22:12599097-12598915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
15-267
               

               
Cow position:
               
chr22:12800679-12800435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
52, 135
               

               
Conread position:
               
15-269
               

               
Cow position:
               
chr22:27825850-27825600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
15-283
               

               
Cow position:
               
chr22:13951190-13950916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
15-283
               

               
Cow position:
               
chr22:28731687-28731430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
15-286
               

               
Cow position:
               
chr22:2702241-2701969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
184, 35
               

               
Conread position:
               
15-286
               

               
Cow position:
               
chr22:4632015-4631747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 187
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr22:10363078-10362808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr22:18654033-18654312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr22:5467350-5467632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 172
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr22:11837187-11837465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 142
               

               
Conread position:
               
15-300
               

               
Cow position:
               
chr22:30712770-30712479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
160, 39
               

               
Conread position:
               
15-309
               

               
Cow position:
               
chr22:12777581-12777864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
15-313
               

               
Cow position:
               
chr22:25342026-25341733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
235, 18
               

               
Conread position:
               
15-380
               

               
Cow position:
               
chr22:845913-845547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
235, 111
               

               
Conread position:
               
15-488
               

               
Cow position:
               
chr22:29013891-29013398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 59
               

               
Conread position:
               
16-287
               

               
Cow position:
               
chr22:30515264-30514995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr22:3325594-3325193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
178, 48
               

               
Conread position:
               
17-228
               

               
Cow position:
               
chr22:11601043-11600840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
179, 41
               

               
Conread position:
               
17-255
               

               
Cow position:
               
chr22:18218881-18219115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
192, 44
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr22:38930498-38930784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
174, 53
               

               
Conread position:
               
17-433
               

               
Cow position:
               
chr22:2216830-2216433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
18-248
               

               
Cow position:
               
chr22:2010809-2010586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
18-287
               

               
Cow position:
               
chr22:644759-645020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
18-292
               

               
Cow position:
               
chr22:31870242-31870511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 153
               

               
Conread position:
               
19-287
               

               
Cow position:
               
chr22:14143106-14143366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 8
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr22:26490473-26490200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 134
               

               
Conread position:
               
19-293
               

               
Cow position:
               
chr22:27401551-27401280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr22:21502748-21502466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
23-287
               

               
Cow position:
               
chr22:34894975-34894712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
23-292
               

               
Cow position:
               
chr22:1609760-1610020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
147, 5
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr22:20687302-20687080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
119, 33
               

               
Conread position:
               
25-296
               

               
Cow position:
               
chr22:891142-891409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 33
               

               
Conread position:
               
25-298
               

               
Cow position:
               
chr22:40048556-40048293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
26-283
               

               
Cow position:
               
chr22:1821872-1822130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
224, 123
               

               
Conread position:
               
26-288
               

               
Cow position:
               
chr22:22054424-22054156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
28-299
               

               
Cow position:
               
chr22:29955002-29955270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
164, 15
               

               
Conread position:
               
29-287
               

               
Cow position:
               
chr22:26107055-26106798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
221, 25
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr22:38939957-38940219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
217, 16
               

               
Conread position:
               
33-286
               

               
Cow position:
               
chr22:39472384-39472635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
217, 40
               

               
Conread position:
               
33-296
               

               
Cow position:
               
chr22:26316462-26316211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
33-298
               

               
Cow position:
               
chr22:13688106-13688382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
92, 169
               

               
Conread position:
               
35-290
               

               
Cow position:
               
chr22:8063331-8063588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
41-297
               

               
Cow position:
               
chr22:30689621-30689362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
44-244
               

               
Cow position:
               
chr22:22148061-22147862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 80
               

               
Conread position:
               
48-287
               

               
Cow position:
               
chr22:8446916-8446672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
49-287
               

               
Cow position:
               
chr22:19848420-19848655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
201, 15
               

               
Conread position:
               
55-287
               

               
Cow position:
               
chr22:4651153-4650921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
187, 69
               

               
Conread position:
               
64-248
               

               
Cow position:
               
chr22:3945138-3944961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
64-287
               

               
Cow position:
               
chr22:30473008-30472786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
186, 10
               

               
Conread position:
               
64-298
               

               
Cow position:
               
chr22:34666010-34665782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
186, 26
               

               
Conread position:
               
64-337
               

               
Cow position:
               
chr22:4026569-4026311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
267, 91
               

               
Conread position:
               
66-248
               

               
Cow position:
               
chr22:2141770-2141601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
66-292
               

               
Cow position:
               
chr22:43397974-43397755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
184, 82
               

               
Conread position:
               
72-287
               

               
Cow position:
               
chr22:3993567-3993350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
73-280
               

               
Cow position:
               
chr22:15959813-15960024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
74-300
               

               
Cow position:
               
chr22:7301880-7302117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
52, 152
               

               
Conread position:
               
75-298
               

               
Cow position:
               
chr22:16235697-16235920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
175, 75
               

               
Conread position:
               
77-287
               

               
Cow position:
               
chr22:44386456-44386658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
174, 78
               

               
Conread position:
               
79-288
               

               
Cow position:
               
chr22:11987266-11987478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
80-298
               

               
Cow position:
               
chr22:8302905-8303114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
170, 69
               

               
Conread position:
               
80-498
               

               
Cow position:
               
chr22:36761575-36761181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 69
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr22:28937970-28938166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 50
               

               
Conread position:
               
101-328
               

               
Cow position:
               
chr22:6494096-6493876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
149, 25
               

               
Conread position:
               
104-306
               

               
Cow position:
               
chr22:1710496-1710296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
148, 44
               

               
Conread position:
               
109-287
               

               
Cow position:
               
chr22:34930826-34931008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
109-298
               

               
Cow position:
               
chr22:13016871-13017051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
113-298
               

               
Cow position:
               
chr22:33985848-33986037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chr22:36208853-36208672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
114-306
               

               
Cow position:
               
chr22:13720610-13720803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
115-498
               

               
Cow position:
               
chr22:19139535-19139918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
116-287
               

               
Cow position:
               
chr22:22231573-22231397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
117-287
               

               
Cow position:
               
chr22:45106004-45106179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
136-296
               

               
Cow position:
               
chr22:28120687-28120523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 13
               
Show alignments to all cow chromosomes.