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Cow genome map

           
Conread name:
           
Liv1-LVRM1G030208
        

               
Conread position:
               
1-196
               

               
Cow position:
               
chr24:19800850-19800661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr24:32070966-32070780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr24:39143615-39143400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr24:352603-352813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr24:28253710-28253495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr24:5695-5911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr24:5633028-5633252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
190, 57
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr24:10125877-10125645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr24:34008570-34008798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr24:7476350-7476569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr24:10012755-10012546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr24:10841204-10841442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr24:24457247-24457474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
209, 59
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr24:2095879-2096123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 154
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr24:6487922-6487686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
193, 97
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr24:25194268-25194023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr24:24755452-24755184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr24:41980656-41980934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 198
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr24:17955441-17955720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
193, 56
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr24:19769492-19769222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
249, 60
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr24:15473361-15473078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr24:7914009-7913719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
193, 148
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr24:28553551-28553823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
249, 53
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr24:35074096-35073813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
248, 32
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr24:39905453-39905737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr24:250575-250849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
191, 59
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr24:7917358-7917647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 57
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr24:29170966-29170685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
170, 50
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:27052491-27052773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 59
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:27290874-27290596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
249, 95
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:27341017-27341305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
190, 66
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:32609650-32609357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 171
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:32822768-32823063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 83
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:34533118-34532842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
198, 53
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:35985727-35986000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:43364364-43364082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
247, 90
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr24:27874598-27874320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
249, 59
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr24:33230673-33230383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
148, 27
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr24:18741569-18741856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
175, 60
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr24:30483945-30484228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
238, 148
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:6140948-6141247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 86
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:6160086-6160375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
238, 59
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:17104567-17104858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
249, 154
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:19465914-19466224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
58, 236
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:19535253-19535535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
249, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:20225743-20225446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
195, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:23556335-23556620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
196, 61
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:27844525-27844811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:27906441-27906137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:29679307-29679603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
180, 50
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:44987372-44987665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr24:36173780-36174075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
197, 58
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr24:15508537-15508827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
249, 26
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr24:34742756-34742456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr24:35794732-35795035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr24:7023420-7023099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 242
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr24:34396176-34396458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:6102833-6102442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr24:17860255-17860724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr24:30544859-30545335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 43
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr24:8886913-8886427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr24:43200267-43200772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
2-171
               

               
Cow position:
               
chr24:16645318-16645489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr24:22647341-22647545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
192, 52
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr24:34782786-34782990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr24:15373407-15373194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr24:22079465-22079241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr24:21918226-21918444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr24:29673524-29673240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr24:32054663-32054392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
248, 72
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr24:33944403-33944126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
248, 38
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr24:32369915-32370193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr24:11840189-11839895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr24:27267629-27267350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
248, 52
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr24:814259-814556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 113
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr24:3493886-3493602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
248, 56
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr24:17311215-17311500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
248, 89
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr24:44041003-44041301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 151
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr24:43432792-43432324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 15
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr24:15707441-15707650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr24:28721890-28721609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
178, 57
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr24:43635439-43635155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr24:29595808-29596096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr24:39218839-39219131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr24:30229474-30229180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 93
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr24:3430735-3430447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
247, 71
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr24:42103375-42103083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
138, 58
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr24:31159620-31159235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr24:27040048-27039804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
149, 35
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr24:27149399-27149135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 146
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr24:18390292-18390562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
246, 57
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr24:18484994-18485279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
59, 145
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr24:201637-201914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr24:30314027-30314313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr24:30235872-30235599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr24:25885159-25885439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 129
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr24:28496583-28496869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr24:31812188-31811895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr24:211985-211690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr24:34315353-34315067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
245, 142
               

               
Conread position:
               
8-207
               

               
Cow position:
               
chr24:17832819-17833008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr24:16509965-16509751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
9-284
               

               
Cow position:
               
chr24:36554838-36555106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 104
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr24:2402373-2402653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr24:35332718-35332440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr24:41985991-41985697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr24:5141937-5141660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
190, 24
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr24:18405316-18405585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
9-288
               

               
Cow position:
               
chr24:43371239-43370965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
241, 52
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr24:32204800-32205085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
240, 24
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr24:31324280-31323997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
63, 148
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr24:42007735-42007455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
230, 51
               

               
Conread position:
               
9-501
               

               
Cow position:
               
chr24:31816573-31816096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr24:11876882-11876602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr24:18970515-18970773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
253, 47
               

               
Conread position:
               
10-292
               

               
Cow position:
               
chr24:40850156-40849878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
10-448
               

               
Cow position:
               
chr24:6507772-6508194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr24:29782156-29781881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
181, 44
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr24:15861607-15861888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
237, 135
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr24:23616687-23616404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
117, 46
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr24:39159556-39159837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
232, 48
               

               
Conread position:
               
13-498
               

               
Cow position:
               
chr24:18331709-18331230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
233, 45
               

               
Conread position:
               
14-286
               

               
Cow position:
               
chr24:11005658-11005382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
180, 56
               

               
Conread position:
               
14-288
               

               
Cow position:
               
chr24:5754826-5754559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
236, 52
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr24:16625496-16625788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 186
               

               
Conread position:
               
14-300
               

               
Cow position:
               
chr24:28332284-28332565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
135, 48
               

               
Conread position:
               
14-304
               

               
Cow position:
               
chr24:40130118-40129826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 56
               

               
Conread position:
               
15-148
               

               
Cow position:
               
chr24:885699-885829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr24:31382890-31382678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 130
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr24:20249907-20250135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
176, 59
               

               
Conread position:
               
15-281
               

               
Cow position:
               
chr24:41755852-41755591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
235, 43
               

               
Conread position:
               
15-285
               

               
Cow position:
               
chr24:27719771-27720031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
214, 24
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr24:36486076-36486340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
184, 27
               

               
Conread position:
               
15-288
               

               
Cow position:
               
chr24:17294201-17294469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr24:20024602-20024316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
179, 45
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr24:35572473-35572196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
179, 45
               

               
Conread position:
               
15-328
               

               
Cow position:
               
chr24:24136872-24137171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
235, 39
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr24:30226928-30226749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
16-283
               

               
Cow position:
               
chr24:27968072-27967803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
17-501
               

               
Cow position:
               
chr24:40184611-40184115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 44
               

               
Conread position:
               
18-276
               

               
Cow position:
               
chr24:16994868-16994624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr24:29707809-29708007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
20-228
               

               
Cow position:
               
chr24:42420656-42420861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
21-302
               

               
Cow position:
               
chr24:40592698-40592427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
230, 43
               

               
Conread position:
               
22-277
               

               
Cow position:
               
chr24:39483460-39483202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
177, 47
               

               
Conread position:
               
22-292
               

               
Cow position:
               
chr24:7001084-7001354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
176, 36
               

               
Conread position:
               
22-308
               

               
Cow position:
               
chr24:27941031-27941309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
228, 25
               

               
Conread position:
               
24-313
               

               
Cow position:
               
chr24:44702953-44702672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
226, 26
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr24:27207216-27207429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr24:42825519-42825732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
170, 33
               

               
Conread position:
               
25-279
               

               
Cow position:
               
chr24:21860243-21860493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
225, 42
               

               
Conread position:
               
29-385
               

               
Cow position:
               
chr24:18975179-18974819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 122
               

               
Conread position:
               
30-298
               

               
Cow position:
               
chr24:6913789-6914055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
220, 94
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr24:5152209-5151967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr24:40908993-40908725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
162, 28
               

               
Conread position:
               
33-298
               

               
Cow position:
               
chr24:20874653-20874385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr24:39493267-39493005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
216, 117
               

               
Conread position:
               
39-298
               

               
Cow position:
               
chr24:6340979-6340726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
206, 51
               

               
Conread position:
               
41-287
               

               
Cow position:
               
chr24:33238578-33238830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
48-286
               

               
Cow position:
               
chr24:21768605-21768362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
58-298
               

               
Cow position:
               
chr24:39440606-39440849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
193, 91
               

               
Conread position:
               
59-288
               

               
Cow position:
               
chr24:29389188-29388968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
191, 89
               

               
Conread position:
               
64-287
               

               
Cow position:
               
chr24:11119226-11118999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 6
               

               
Conread position:
               
64-300
               

               
Cow position:
               
chr24:27810129-27809888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
186, 91
               

               
Conread position:
               
65-296
               

               
Cow position:
               
chr24:33098543-33098778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
67-287
               

               
Cow position:
               
chr24:27543538-27543757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
182, 10
               

               
Conread position:
               
70-290
               

               
Cow position:
               
chr24:18324558-18324331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 79
               

               
Conread position:
               
72-287
               

               
Cow position:
               
chr24:20969865-20970073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
177, 77
               

               
Conread position:
               
73-251
               

               
Cow position:
               
chr24:30776732-30776905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
73-285
               

               
Cow position:
               
chr24:591847-591631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
177, 76
               

               
Conread position:
               
73-287
               

               
Cow position:
               
chr24:38347618-38347398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
177, 76
               

               
Conread position:
               
73-298
               

               
Cow position:
               
chr24:19658490-19658256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
73-298
               

               
Cow position:
               
chr24:21264575-21264797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
177, 76
               

               
Conread position:
               
75-299
               

               
Cow position:
               
chr24:11007151-11006922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
77-286
               

               
Cow position:
               
chr24:6900756-6900544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
168, 72
               

               
Conread position:
               
77-287
               

               
Cow position:
               
chr24:37246282-37246499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 80
               

               
Conread position:
               
77-298
               

               
Cow position:
               
chr24:25320925-25320698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
99-498
               

               
Cow position:
               
chr24:25424973-25424554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
105-497
               

               
Cow position:
               
chr24:45004866-45004475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
109-298
               

               
Cow position:
               
chr24:24002876-24002687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
119-298
               

               
Cow position:
               
chr24:19804578-19804396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 36
               
Show alignments to all cow chromosomes.