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Cow genome map

           
Conread name:
           
Liv1-LVRM1G030208
        

               
Conread position:
               
1-145
               

               
Cow position:
               
chr28:12363125-12363270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr28:19564196-19564338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr28:3011237-3011384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr28:18369975-18370124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 28
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr28:3484612-3484461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr28:5166800-5166646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr28:9928259-9928452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr28:28903631-28903847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr28:2752462-2752684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
193, 51
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr28:22339026-22338820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 103
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr28:26982706-26982931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr28:11866633-11866857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
173, 59
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr28:751259-751032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
193, 60
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr28:4881208-4881439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr28:9099968-9099732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
195, 54
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr28:5437053-5437296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
194, 148
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr28:18625266-18625018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 152
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr28:25283232-25283000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
180, 59
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr28:26685149-26684882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr28:18354296-18354556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
250, 51
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr28:16109971-16109700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr28:616418-616156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr28:22279168-22279430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr28:3256830-3256552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
178, 57
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr28:22485285-22484999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 150
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr28:23007698-23007977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 148
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr28:34230260-34229980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
200, 49
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr28:7751268-7751551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr28:12758468-12758757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
190, 73
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr28:25249386-25249105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr28:1838025-1837745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr28:3078649-3078929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
248, 69
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr28:4058014-4057735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr28:5826982-5826697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
117, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr28:14933990-14933711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
196, 59
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr28:17637836-17638118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr28:21502424-21502144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
248, 54
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr28:16252824-16253107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 149
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr28:31109972-31110257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
252, 59
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr28:5128697-5128982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
193, 90
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr28:13267825-13267525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 152
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr28:23410293-23410579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
249, 53
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr28:33052068-33051765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
35, 159
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr28:17288248-17287967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
212, 53
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr28:27218355-27218062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr28:10615914-10616210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr28:10745246-10744948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
249, 76
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr28:21868489-21868192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
198, 68
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:3143843-3144151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 162
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:7697946-7698242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 63
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:12946981-12946683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
190, 90
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:14998099-14997803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:18791048-18790750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:19222119-19222406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
191, 27
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:21363779-21363497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
263, 60
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:21598220-21598514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
228, 63
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:26743658-26743361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:31649118-31648813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 161
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr28:5792740-5792440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
151, 63
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr28:18591303-18591008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 91
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr28:4841361-4841673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr28:13176649-13176962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
193, 95
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr28:26719375-26718964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
249, 57
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr28:19079813-19080255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 56
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr28:11380008-11380449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr28:13865878-13865382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 156
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr28:30746699-30746879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr28:18760017-18760228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 51
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr28:3714832-3714597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr28:34430392-34430631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
192, 58
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr28:5144490-5144742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
235, 53
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr28:10529459-10529731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
248, 51
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr28:21355262-21354974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr28:26103737-26103465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr28:6059439-6059724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
192, 57
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr28:11786687-11786959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
248, 61
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr28:20313308-20313024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
247, 62
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr28:4307866-4308153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
41, 180
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr28:21103794-21104107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr28:3914748-3914449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr28:4282459-4282753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
194, 56
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr28:5817871-5817586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr28:15601308-15601003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
141, 56
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr28:14657728-14657432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 56
               

               
Conread position:
               
2-429
               

               
Cow position:
               
chr28:8347762-8347366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr28:20409423-20408958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
33, 44
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr28:27161296-27161465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr28:4138641-4138868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr28:25459564-25459325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr28:8408764-8408535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr28:20963499-20963780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr28:2899019-2898746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
244, 51
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr28:16085355-16085070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
247, 55
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr28:25806603-25806334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
247, 61
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr28:21380911-21380620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 150
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr28:5931386-5931084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
3-459
               

               
Cow position:
               
chr28:23793281-23793705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 58
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:26922339-26922615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
238, 54
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:28765874-28766161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
147, 53
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr28:26269360-26269069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr28:25700834-25701119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr28:5366119-5366406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
190, 10
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr28:19025976-19026281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
4-498
               

               
Cow position:
               
chr28:28076390-28076894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 50
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr28:2737778-2738016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
188, 69
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr28:13474328-13474048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
245, 54
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr28:2862896-2862588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr28:8681812-8682098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
128, 212
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr28:5552911-5553187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 151
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr28:13607914-13607634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr28:23724438-23724641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
177, 49
               

               
Conread position:
               
9-248
               

               
Cow position:
               
chr28:16204310-16204537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
185, 52
               

               
Conread position:
               
9-280
               

               
Cow position:
               
chr28:30293565-30293834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
241, 24
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr28:31987638-31987354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr28:34877943-34878224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr28:3023889-3024167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
241, 106
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr28:11426517-11426806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr28:10053306-10053564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 173
               

               
Conread position:
               
10-296
               

               
Cow position:
               
chr28:17316888-17316599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
13-272
               

               
Cow position:
               
chr28:10606607-10606854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
238, 16
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr28:23616427-23616151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
181, 47
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr28:33163439-33163715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
6, 144
               

               
Conread position:
               
13-309
               

               
Cow position:
               
chr28:12048689-12048973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
232, 20
               

               
Conread position:
               
14-264
               

               
Cow position:
               
chr28:22739811-22739581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
14-273
               

               
Cow position:
               
chr28:9285351-9285615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
14-285
               

               
Cow position:
               
chr28:24646558-24646291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
49, 83
               

               
Conread position:
               
14-286
               

               
Cow position:
               
chr28:19222583-19222847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 45
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr28:7144811-7144529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
235, 139
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr28:16401919-16401636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr28:7549039-7549323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
182, 46
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr28:25727396-25727120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr28:19024163-19023946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
15-230
               

               
Cow position:
               
chr28:118032-118242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
179, 49
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr28:7980399-7980622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr28:19394637-19394427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr28:7503863-7503587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
134, 89
               

               
Conread position:
               
15-288
               

               
Cow position:
               
chr28:22371663-22371928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 64
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr28:24343389-24343108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
172, 34
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr28:4022406-4022121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
234, 134
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr28:4880246-4880525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr28:7512565-7512853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
15-305
               

               
Cow position:
               
chr28:5773654-5773374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
235, 45
               

               
Conread position:
               
15-359
               

               
Cow position:
               
chr28:8084722-8084375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
16-248
               

               
Cow position:
               
chr28:10478326-10478547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
182, 41
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr28:10669593-10669313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr28:15263698-15263977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
145, 134
               

               
Conread position:
               
18-287
               

               
Cow position:
               
chr28:9390348-9390616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
19-285
               

               
Cow position:
               
chr28:22170695-22170967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
20-287
               

               
Cow position:
               
chr28:7590168-7590434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
225, 40
               

               
Conread position:
               
21-147
               

               
Cow position:
               
chr28:7644466-7644338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
22-287
               

               
Cow position:
               
chr28:26784452-26784718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
228, 42
               

               
Conread position:
               
22-296
               

               
Cow position:
               
chr28:12619586-12619301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr28:7865338-7865067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
226, 133
               

               
Conread position:
               
25-285
               

               
Cow position:
               
chr28:23840212-23839960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
25-286
               

               
Cow position:
               
chr28:21672804-21672549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
152, 33
               

               
Conread position:
               
27-285
               

               
Cow position:
               
chr28:34082005-34082267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 125
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr28:17029712-17029986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
221, 62
               

               
Conread position:
               
34-305
               

               
Cow position:
               
chr28:22321426-22321152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
38-305
               

               
Cow position:
               
chr28:11827488-11827228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
43-228
               

               
Cow position:
               
chr28:3105240-3105053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
43-287
               

               
Cow position:
               
chr28:15008151-15007910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
45-298
               

               
Cow position:
               
chr28:2124418-2124178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
45-313
               

               
Cow position:
               
chr28:28414662-28414394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
126, 9
               

               
Conread position:
               
51-285
               

               
Cow position:
               
chr28:16243774-16244008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
141, 73
               

               
Conread position:
               
64-298
               

               
Cow position:
               
chr28:13356604-13356846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
68, 141
               

               
Conread position:
               
64-493
               

               
Cow position:
               
chr28:24996617-24997054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
145, 72
               

               
Conread position:
               
65-287
               

               
Cow position:
               
chr28:8348682-8348904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 6
               

               
Conread position:
               
65-307
               

               
Cow position:
               
chr28:11451493-11451737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
134, 21
               

               
Conread position:
               
66-287
               

               
Cow position:
               
chr28:7684713-7684928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
182, 54
               

               
Conread position:
               
68-270
               

               
Cow position:
               
chr28:3077957-3077759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
181, 87
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr28:17738105-17738340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
70-287
               

               
Cow position:
               
chr28:2819724-2819507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
180, 26
               

               
Conread position:
               
73-286
               

               
Cow position:
               
chr28:10888627-10888413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
74-287
               

               
Cow position:
               
chr28:15272300-15272512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
174, 50
               

               
Conread position:
               
74-459
               

               
Cow position:
               
chr28:14218513-14218916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
81-298
               

               
Cow position:
               
chr28:13371218-13371429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
168, 68
               

               
Conread position:
               
104-292
               

               
Cow position:
               
chr28:20759988-20760179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
112-297
               

               
Cow position:
               
chr28:16450779-16450955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
115-287
               

               
Cow position:
               
chr28:3480193-3480017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
124-296
               

               
Cow position:
               
chr28:10296111-10295930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
151-287
               

               
Cow position:
               
chr28:8103498-8103640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
152-292
               

               
Cow position:
               
chr28:7372362-7372506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
184-302
               

               
Cow position:
               
chr28:11665834-11665958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
189-496
               

               
Cow position:
               
chr28:19961763-19961460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
336-497
               

               
Cow position:
               
chr28:11426799-11426960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.