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Cow genome map

           
Conread name:
           
Liv1-LVRM1G090189
        

               
Conread position:
               
220-646
               

               
Cow position:
               
chr1:39480373-39479950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
248-566
               

               
Cow position:
               
chr1:25178881-25178564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
248-647
               

               
Cow position:
               
chr1:17113312-17112911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
250-652
               

               
Cow position:
               
chr1:22481515-22481110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
252-474
               

               
Cow position:
               
chr1:22629696-22629461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
14, 156
               

               
Conread position:
               
255-645
               

               
Cow position:
               
chr1:21114275-21113884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 122
               

               
Conread position:
               
255-646
               

               
Cow position:
               
chr1:5505085-5505483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 147
               

               
Conread position:
               
255-652
               

               
Cow position:
               
chr1:99117164-99117566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
113, 144
               

               
Conread position:
               
257-646
               

               
Cow position:
               
chr1:89186305-89185923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
257-652
               

               
Cow position:
               
chr1:16973961-16973571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 142
               

               
Conread position:
               
261-646
               

               
Cow position:
               
chr1:57120677-57120298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
261-652
               

               
Cow position:
               
chr1:51980142-51980523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
262-652
               

               
Cow position:
               
chr1:73762389-73761994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
267-452
               

               
Cow position:
               
chr1:57526437-57526621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 132
               

               
Conread position:
               
267-455
               

               
Cow position:
               
chr1:100509912-100510096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
267-588
               

               
Cow position:
               
chr1:31191263-31190948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 132
               

               
Conread position:
               
267-631
               

               
Cow position:
               
chr1:90393594-90393231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 130
               

               
Conread position:
               
267-634
               

               
Cow position:
               
chr1:102552178-102552532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 132
               

               
Conread position:
               
267-643
               

               
Cow position:
               
chr1:55145206-55145584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
104, 118
               

               
Conread position:
               
267-646
               

               
Cow position:
               
chr1:33548234-33547856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
268-506
               

               
Cow position:
               
chr1:60342218-60342466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
103, 131
               

               
Conread position:
               
268-573
               

               
Cow position:
               
chr1:97285493-97285193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 131
               

               
Conread position:
               
268-634
               

               
Cow position:
               
chr1:52434184-52434551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
270-649
               

               
Cow position:
               
chr1:31646457-31646080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
271-497
               

               
Cow position:
               
chr1:31362948-31362715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
101, 128
               

               
Conread position:
               
271-634
               

               
Cow position:
               
chr1:16838482-16838845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
271-646
               

               
Cow position:
               
chr1:11324673-11325033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
97, 124
               

               
Conread position:
               
271-646
               

               
Cow position:
               
chr1:17938587-17938208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 111
               

               
Conread position:
               
271-646
               

               
Cow position:
               
chr1:86705317-86705681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
271-646
               

               
Cow position:
               
chr1:90605711-90605315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 129
               

               
Conread position:
               
271-652
               

               
Cow position:
               
chr1:20543391-20543774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
272-452
               

               
Cow position:
               
chr1:58356567-58356388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-454
               

               
Cow position:
               
chr1:7196053-7195872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-455
               

               
Cow position:
               
chr1:21785649-21785828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
272-455
               

               
Cow position:
               
chr1:38478471-38478653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
272-455
               

               
Cow position:
               
chr1:40920305-40920486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 63
               

               
Conread position:
               
272-455
               

               
Cow position:
               
chr1:58171903-58172086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 128
               

               
Conread position:
               
272-467
               

               
Cow position:
               
chr1:17436509-17436316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-486
               

               
Cow position:
               
chr1:9377313-9377090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-486
               

               
Cow position:
               
chr1:29365572-29365796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-486
               

               
Cow position:
               
chr1:30103411-30103187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-489
               

               
Cow position:
               
chr1:9308852-9308626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
185, 95
               

               
Conread position:
               
272-491
               

               
Cow position:
               
chr1:33656019-33655789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-498
               

               
Cow position:
               
chr1:27494128-27494358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
272-499
               

               
Cow position:
               
chr1:9262939-9262701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
99, 128
               

               
Conread position:
               
272-499
               

               
Cow position:
               
chr1:18487011-18486773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-499
               

               
Cow position:
               
chr1:19162135-19162372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
272-499
               

               
Cow position:
               
chr1:55493898-55493660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-499
               

               
Cow position:
               
chr1:85807448-85807211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
99, 116
               

               
Conread position:
               
272-506
               

               
Cow position:
               
chr1:31106227-31105982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-506
               

               
Cow position:
               
chr1:91890225-91889978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-516
               

               
Cow position:
               
chr1:24594776-24595025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
272-525
               

               
Cow position:
               
chr1:54295977-54295719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
272-555
               

               
Cow position:
               
chr1:84284248-84283964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-575
               

               
Cow position:
               
chr1:47119123-47119427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-577
               

               
Cow position:
               
chr1:31707648-31707974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-577
               

               
Cow position:
               
chr1:92008440-92008735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
272-578
               

               
Cow position:
               
chr1:8556852-8557158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
272-578
               

               
Cow position:
               
chr1:52067793-52068114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
100, 127
               

               
Conread position:
               
272-586
               

               
Cow position:
               
chr1:49133007-49132692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-591
               

               
Cow position:
               
chr1:81302282-81302600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-602
               

               
Cow position:
               
chr1:53311396-53311727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 119
               

               
Conread position:
               
272-609
               

               
Cow position:
               
chr1:21090631-21090969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-611
               

               
Cow position:
               
chr1:70051407-70051733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
272-615
               

               
Cow position:
               
chr1:22529642-22529301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 96
               

               
Conread position:
               
272-617
               

               
Cow position:
               
chr1:70038075-70037734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-618
               

               
Cow position:
               
chr1:79590025-79590364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
272-623
               

               
Cow position:
               
chr1:31415057-31414711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 124
               

               
Conread position:
               
272-623
               

               
Cow position:
               
chr1:101524220-101523885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
272-627
               

               
Cow position:
               
chr1:40510092-40509736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
272-631
               

               
Cow position:
               
chr1:57759081-57759435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 125
               

               
Conread position:
               
272-631
               

               
Cow position:
               
chr1:88027992-88028347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
272-632
               

               
Cow position:
               
chr1:11874473-11874125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
180, 112
               

               
Conread position:
               
272-633
               

               
Cow position:
               
chr1:56439245-56438903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
153, 32
               

               
Conread position:
               
272-633
               

               
Cow position:
               
chr1:57946110-57946458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
272-633
               

               
Cow position:
               
chr1:61747000-61746654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:4336929-4337294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 168
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:7837586-7837234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 67
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:8828187-8828549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:13405219-13404862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
99, 116
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:21576712-21577071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:21677966-21678320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 94
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:22012794-22012434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 121
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:30079109-30079470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 89
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:45006140-45006486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:55044096-55043735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:55328061-55327708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:56170126-56170488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:56726331-56726686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 126
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:66971991-66971632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:67913240-67913606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:72086765-72087128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:73967678-73968041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr1:77104196-77103840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
80, 139
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr1:3339833-3340198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr1:7324237-7324601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr1:38279574-38279207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 127
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr1:58440131-58439773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
76, 85
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr1:85630502-85630867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-637
               

               
Cow position:
               
chr1:71559578-71559219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-639
               

               
Cow position:
               
chr1:42888312-42887960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 29
               

               
Conread position:
               
272-640
               

               
Cow position:
               
chr1:72864115-72864480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
272-642
               

               
Cow position:
               
chr1:37324102-37323749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
168, 98
               

               
Conread position:
               
272-643
               

               
Cow position:
               
chr1:21133941-21133594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-643
               

               
Cow position:
               
chr1:56631554-56631915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 54
               

               
Conread position:
               
272-643
               

               
Cow position:
               
chr1:89493064-89492699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-644
               

               
Cow position:
               
chr1:67078658-67078284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 98
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr1:29428763-29429148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:3383151-3382774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 98
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:6197110-6196735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 96
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:7162642-7162263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:8602804-8602431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:11199464-11199086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:14240901-14240522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:17009557-17009187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
99, 78
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:17033426-17033050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 124
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:19236331-19235952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:19441360-19440999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:21377392-21377013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:24654998-24655373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 95
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:25053421-25053042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:26811906-26811529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 110
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:28876264-28876642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:29037708-29038085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:30033450-30033811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:30372071-30372439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:30531854-30531479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:33716126-33716505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:35598644-35598267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:38711878-38712257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:48345351-48345715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
185, 82
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:49268049-49268425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:51444410-51444785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:52355506-52355128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:52755367-52754989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 128
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:53309490-53309119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:55780038-55780413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:57570997-57571377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 128
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:58340088-58340459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:61331796-61331418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:63341306-63340927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 128
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:63602623-63602243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 128
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:65389725-65390102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 110
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:67831970-67831591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:68602464-68602085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:70535297-70534923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:71794699-71795078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:73565312-73564933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:75403060-75403439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:76873048-76873423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:83169608-83169987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:85777293-85776917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:86544971-86544594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 126
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:86593138-86592763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:86599849-86599466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:88179024-88179404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:90912995-90913374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 128
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:94662819-94663198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr1:99916606-99916984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr1:12468624-12468250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 125
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr1:31535018-31535400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr1:61203551-61203932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr1:82479150-82479531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:3970098-3969737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:7405837-7406220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:7711949-7712323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
182, 27
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:8470996-8470614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:8517904-8517521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:10725790-10726172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:15149477-15149095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:18087595-18087978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:19775925-19775543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:20527326-20527708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:20832048-20832431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 128
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:20846847-20846464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:23861543-23861160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:26537020-26536637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:26588117-26588499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:26722496-26722115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:28520817-28521200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:28714205-28714588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:28812076-28811693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:31351600-31351220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 126
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:33854433-33854815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:40058271-40058642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:46820781-46821162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
92, 79
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:47454811-47454432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:48811028-48810645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:51883781-51884150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 113
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:54472248-54471865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:55273876-55273495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:56205644-56205265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 128
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:56666266-56666649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:57505957-57506340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:57574420-57574038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:59483697-59483314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:60251260-60250877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:61096664-61097049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:61340154-61339771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:61342536-61342161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:62927635-62928018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:63048745-63049127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 87
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:66490747-66491126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:67006045-67006427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:68145805-68145422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:68610606-68610229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:69504208-69503825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:69671455-69671072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:69769985-69770367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:72766870-72766489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:73440132-73440515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:76749226-76748848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 131
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:77554832-77554454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:77747910-77748292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:78587292-78586909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 128
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:78921847-78921464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:79553662-79554044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:79633386-79633007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 128
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:80564911-80564528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:84446845-84447231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 243
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:89111998-89112365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:89234866-89234484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 128
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:89431569-89431952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:89793119-89793502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:91673398-91673780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:91902185-91902568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:98354229-98353846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:99118650-99119033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:99675170-99674787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-649
               

               
Cow position:
               
chr1:102814639-102815022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-650
               

               
Cow position:
               
chr1:56425081-56425460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
272-650
               

               
Cow position:
               
chr1:72986624-72987006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-650
               

               
Cow position:
               
chr1:82920972-82920592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
272-650
               

               
Cow position:
               
chr1:93857688-93858071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-651
               

               
Cow position:
               
chr1:11289223-11288836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-651
               

               
Cow position:
               
chr1:73463132-73463516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 121
               

               
Conread position:
               
272-651
               

               
Cow position:
               
chr1:101833563-101833944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:13579606-13579226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
185, 19
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:16797930-16797553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:18024649-18024269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 114
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:21132698-21132304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:30494734-30495105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 110
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:31342230-31341857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:47079014-47078628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:53519831-53520206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 43
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:56746041-56746436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:56857002-56857380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:58192638-58192254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:58418842-58419222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 110
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:58528438-58528823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:63044983-63044606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 78
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:71792096-71792481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 129
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:73443684-73443321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 110
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:82091062-82091447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:89090371-89089985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:98534763-98535169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 126
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:99572398-99572023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
272-652
               

               
Cow position:
               
chr1:100420766-100421139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
273-455
               

               
Cow position:
               
chr1:53368375-53368556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
273-458
               

               
Cow position:
               
chr1:88984282-88984100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
273-506
               

               
Cow position:
               
chr1:8745665-8745908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
273-577
               

               
Cow position:
               
chr1:52171641-52171325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
83, 136
               

               
Conread position:
               
273-599
               

               
Cow position:
               
chr1:2764284-2764610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
99, 78
               

               
Conread position:
               
273-608
               

               
Cow position:
               
chr1:24562581-24562253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 126
               

               
Conread position:
               
273-634
               

               
Cow position:
               
chr1:57363165-57362804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
273-634
               

               
Cow position:
               
chr1:95474733-95474373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
273-639
               

               
Cow position:
               
chr1:24571968-24571618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 126
               

               
Conread position:
               
273-642
               

               
Cow position:
               
chr1:20797993-20798357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
273-646
               

               
Cow position:
               
chr1:9595777-9595401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
273-646
               

               
Cow position:
               
chr1:18962563-18962204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
273-646
               

               
Cow position:
               
chr1:57659786-57660145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
273-646
               

               
Cow position:
               
chr1:69406325-69406703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
273-646
               

               
Cow position:
               
chr1:82909663-82909290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
273-646
               

               
Cow position:
               
chr1:100888340-100887963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 92
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr1:73064168-73063792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 123
               

               
Conread position:
               
273-648
               

               
Cow position:
               
chr1:57958390-57958016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
273-648
               

               
Cow position:
               
chr1:82369587-82369959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
273-649
               

               
Cow position:
               
chr1:40681564-40681182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
273-649
               

               
Cow position:
               
chr1:63046052-63046434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 127
               

               
Conread position:
               
273-652
               

               
Cow position:
               
chr1:22789568-22789949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 126
               

               
Conread position:
               
273-652
               

               
Cow position:
               
chr1:27309909-27309541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
98, 109
               

               
Conread position:
               
273-652
               

               
Cow position:
               
chr1:53649818-53650201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 127
               

               
Conread position:
               
273-652
               

               
Cow position:
               
chr1:54933095-54933479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
273-652
               

               
Cow position:
               
chr1:98617839-98618215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 122
               

               
Conread position:
               
273-652
               

               
Cow position:
               
chr1:100451500-100451127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 97
               

               
Conread position:
               
274-485
               

               
Cow position:
               
chr1:48036467-48036687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 125
               

               
Conread position:
               
274-603
               

               
Cow position:
               
chr1:14562045-14561718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
274-634
               

               
Cow position:
               
chr1:13438289-13438648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
274-646
               

               
Cow position:
               
chr1:76618306-76617930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 126
               

               
Conread position:
               
274-646
               

               
Cow position:
               
chr1:102431571-102431198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 125
               

               
Conread position:
               
274-649
               

               
Cow position:
               
chr1:25552975-25553352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
274-649
               

               
Cow position:
               
chr1:91105210-91105587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 125
               

               
Conread position:
               
274-652
               

               
Cow position:
               
chr1:30440331-30440730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
102, 36
               

               
Conread position:
               
276-455
               

               
Cow position:
               
chr1:31239060-31238887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
276-638
               

               
Cow position:
               
chr1:9261679-9262029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
178, 95
               

               
Conread position:
               
276-642
               

               
Cow position:
               
chr1:38545547-38545184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
277-530
               

               
Cow position:
               
chr1:53396876-53397136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
277-629
               

               
Cow position:
               
chr1:30034798-30035138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 93
               

               
Conread position:
               
277-642
               

               
Cow position:
               
chr1:42875485-42875127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
277-648
               

               
Cow position:
               
chr1:85143053-85142668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
277-652
               

               
Cow position:
               
chr1:19145995-19145609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
277-652
               

               
Cow position:
               
chr1:51967425-51967793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 94
               

               
Conread position:
               
277-652
               

               
Cow position:
               
chr1:52053992-52054372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
277-652
               

               
Cow position:
               
chr1:61748279-61747901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
278-652
               

               
Cow position:
               
chr1:38417995-38418364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
151, 101
               

               
Conread position:
               
279-652
               

               
Cow position:
               
chr1:34684655-34685047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 124
               

               
Conread position:
               
280-652
               

               
Cow position:
               
chr1:42056780-42057136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
281-634
               

               
Cow position:
               
chr1:46613121-46612768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
281-634
               

               
Cow position:
               
chr1:65031637-65031292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
283-634
               

               
Cow position:
               
chr1:89484285-89484620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 37
               

               
Conread position:
               
284-652
               

               
Cow position:
               
chr1:26446334-26446699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
286-520
               

               
Cow position:
               
chr1:21458867-21459102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 110
               

               
Conread position:
               
286-649
               

               
Cow position:
               
chr1:33899721-33900088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
286-652
               

               
Cow position:
               
chr1:88328299-88327933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
292-652
               

               
Cow position:
               
chr1:37542106-37541758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
299-639
               

               
Cow position:
               
chr1:86506147-86505820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 44
               

               
Conread position:
               
300-646
               

               
Cow position:
               
chr1:70864453-70864787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
301-455
               

               
Cow position:
               
chr1:59590946-59590794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 97
               

               
Conread position:
               
301-518
               

               
Cow position:
               
chr1:81860315-81860087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
301-634
               

               
Cow position:
               
chr1:100591577-100591244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
301-636
               

               
Cow position:
               
chr1:38400843-38401149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
187, 43
               

               
Conread position:
               
301-643
               

               
Cow position:
               
chr1:99582262-99581914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 96
               

               
Conread position:
               
301-646
               

               
Cow position:
               
chr1:11854749-11854413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 98
               

               
Conread position:
               
301-646
               

               
Cow position:
               
chr1:36646256-36645911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
301-649
               

               
Cow position:
               
chr1:16819807-16820155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 98
               

               
Conread position:
               
301-649
               

               
Cow position:
               
chr1:21258404-21258053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 70
               

               
Conread position:
               
301-649
               

               
Cow position:
               
chr1:34533436-34533790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
301-649
               

               
Cow position:
               
chr1:46694711-46694362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
302-643
               

               
Cow position:
               
chr1:19484045-19483708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
303-652
               

               
Cow position:
               
chr1:85773405-85773757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
154, 68
               

               
Conread position:
               
304-646
               

               
Cow position:
               
chr1:55159185-55158838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 95
               

               
Conread position:
               
307-633
               

               
Cow position:
               
chr1:50764359-50764675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 64
               

               
Conread position:
               
307-634
               

               
Cow position:
               
chr1:52371173-52371501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
307-634
               

               
Cow position:
               
chr1:52379494-52379822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
307-636
               

               
Cow position:
               
chr1:40088576-40088908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
307-646
               

               
Cow position:
               
chr1:62508048-62507700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 92
               

               
Conread position:
               
307-649
               

               
Cow position:
               
chr1:39235302-39234958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 92
               

               
Conread position:
               
307-652
               

               
Cow position:
               
chr1:34858472-34858144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
307-652
               

               
Cow position:
               
chr1:40532669-40532338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
307-652
               

               
Cow position:
               
chr1:72139395-72139746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
309-652
               

               
Cow position:
               
chr1:72103320-72103644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
310-564
               

               
Cow position:
               
chr1:40964942-40964687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
310-634
               

               
Cow position:
               
chr1:73010188-73010514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
310-635
               

               
Cow position:
               
chr1:57397109-57396795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
310-642
               

               
Cow position:
               
chr1:58197234-58196917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
310-648
               

               
Cow position:
               
chr1:42054353-42054032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
310-649
               

               
Cow position:
               
chr1:93850505-93850850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
311-624
               

               
Cow position:
               
chr1:29656391-29656708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
311-648
               

               
Cow position:
               
chr1:92921031-92920689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
312-652
               

               
Cow position:
               
chr1:3931134-3930788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
313-498
               

               
Cow position:
               
chr1:72806596-72806792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
313-648
               

               
Cow position:
               
chr1:24580615-24580948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
313-649
               

               
Cow position:
               
chr1:79334780-79334438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
313-652
               

               
Cow position:
               
chr1:24440852-24440510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
314-508
               

               
Cow position:
               
chr1:64942328-64942123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 85
               

               
Conread position:
               
316-442
               

               
Cow position:
               
chr1:23658926-23658802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
316-640
               

               
Cow position:
               
chr1:61727867-61727551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 6
               

               
Conread position:
               
317-649
               

               
Cow position:
               
chr1:77924692-77925030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
318-561
               

               
Cow position:
               
chr1:64595098-64594854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
319-649
               

               
Cow position:
               
chr1:12375091-12374755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
319-649
               

               
Cow position:
               
chr1:95456565-95456900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
322-634
               

               
Cow position:
               
chr1:102321898-102321590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
322-646
               

               
Cow position:
               
chr1:17188024-17187695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
322-652
               

               
Cow position:
               
chr1:43449296-43448959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
323-649
               

               
Cow position:
               
chr1:2989700-2990032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
323-649
               

               
Cow position:
               
chr1:18698646-18698979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
323-652
               

               
Cow position:
               
chr1:63239911-63240243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
324-649
               

               
Cow position:
               
chr1:86496507-86496838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
325-634
               

               
Cow position:
               
chr1:79453541-79453231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
329-646
               

               
Cow position:
               
chr1:72590141-72589819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr1:10033761-10034077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
330-649
               

               
Cow position:
               
chr1:11666316-11665992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
331-650
               

               
Cow position:
               
chr1:16117174-16116849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
331-652
               

               
Cow position:
               
chr1:64717667-64717340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
333-634
               

               
Cow position:
               
chr1:17248436-17248134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
333-652
               

               
Cow position:
               
chr1:71690783-71691105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
338-634
               

               
Cow position:
               
chr1:81308593-81308890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
338-649
               

               
Cow position:
               
chr1:46930710-46930405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
339-643
               

               
Cow position:
               
chr1:2744343-2744634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
340-646
               

               
Cow position:
               
chr1:18195829-18196140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
346-532
               

               
Cow position:
               
chr1:22730329-22730137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
346-652
               

               
Cow position:
               
chr1:4375544-4375251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
347-649
               

               
Cow position:
               
chr1:74938978-74939272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
353-652
               

               
Cow position:
               
chr1:82879681-82879979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
357-634
               

               
Cow position:
               
chr1:3263240-3263518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
357-649
               

               
Cow position:
               
chr1:21535011-21534712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
359-634
               

               
Cow position:
               
chr1:71044763-71045029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr1:5163088-5162797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
360-636
               

               
Cow position:
               
chr1:42739950-42740228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
360-643
               

               
Cow position:
               
chr1:67289877-67290155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
361-630
               

               
Cow position:
               
chr1:5013543-5013273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
361-646
               

               
Cow position:
               
chr1:13251289-13251000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
361-652
               

               
Cow position:
               
chr1:22253330-22253621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
362-649
               

               
Cow position:
               
chr1:26838211-26838496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
363-652
               

               
Cow position:
               
chr1:92196235-92196525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
364-610
               

               
Cow position:
               
chr1:83136200-83136449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
366-646
               

               
Cow position:
               
chr1:32563273-32562994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
88, 5
               

               
Conread position:
               
367-648
               

               
Cow position:
               
chr1:82567679-82567960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
367-649
               

               
Cow position:
               
chr1:66144962-66145249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
367-652
               

               
Cow position:
               
chr1:31352364-31352081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
369-652
               

               
Cow position:
               
chr1:68281813-68282096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
370-634
               

               
Cow position:
               
chr1:52510849-52510589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
370-646
               

               
Cow position:
               
chr1:56191153-56190874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
371-609
               

               
Cow position:
               
chr1:21165035-21165273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
371-649
               

               
Cow position:
               
chr1:83060375-83060093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
371-652
               

               
Cow position:
               
chr1:19884636-19884349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
371-652
               

               
Cow position:
               
chr1:21507820-21507540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
373-652
               

               
Cow position:
               
chr1:57679110-57678831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
375-649
               

               
Cow position:
               
chr1:7415756-7416034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
375-649
               

               
Cow position:
               
chr1:59202957-59202677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
376-612
               

               
Cow position:
               
chr1:61662266-61662031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
379-649
               

               
Cow position:
               
chr1:74513869-74513594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
379-649
               

               
Cow position:
               
chr1:84448899-84449174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
393-649
               

               
Cow position:
               
chr1:19056159-19056417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 118
               

               
Conread position:
               
393-649
               

               
Cow position:
               
chr1:28176042-28176297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
397-643
               

               
Cow position:
               
chr1:101008563-101008319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
397-646
               

               
Cow position:
               
chr1:61282712-61282965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
398-628
               

               
Cow position:
               
chr1:42554296-42554527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
398-634
               

               
Cow position:
               
chr1:20146706-20146941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
398-646
               

               
Cow position:
               
chr1:78290849-78291102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 143
               

               
Conread position:
               
398-646
               

               
Cow position:
               
chr1:99838060-99837806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
402-652
               

               
Cow position:
               
chr1:95766085-95765832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
405-634
               

               
Cow position:
               
chr1:15463151-15463380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
407-634
               

               
Cow position:
               
chr1:6765797-6765574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
413-646
               

               
Cow position:
               
chr1:70069094-70068866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
419-652
               

               
Cow position:
               
chr1:57635930-57636164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
421-651
               

               
Cow position:
               
chr1:7196679-7196905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
440-652
               

               
Cow position:
               
chr1:56619602-56619394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
442-645
               

               
Cow position:
               
chr1:71667134-71666928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
443-617
               

               
Cow position:
               
chr1:23658722-23658558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
443-645
               

               
Cow position:
               
chr1:44079073-44078877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
443-646
               

               
Cow position:
               
chr1:22727648-22727842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
443-649
               

               
Cow position:
               
chr1:20849184-20848982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
443-652
               

               
Cow position:
               
chr1:52508273-52508071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
443-652
               

               
Cow position:
               
chr1:53371714-53371920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
443-652
               

               
Cow position:
               
chr1:72114487-72114688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
444-652
               

               
Cow position:
               
chr1:76851925-76851730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
445-649
               

               
Cow position:
               
chr1:78796723-78796526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
446-646
               

               
Cow position:
               
chr1:66242711-66242520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
447-592
               

               
Cow position:
               
chr1:51982798-51982935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
447-610
               

               
Cow position:
               
chr1:31515762-31515609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
447-634
               

               
Cow position:
               
chr1:73434152-73433975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
447-645
               

               
Cow position:
               
chr1:23117856-23117664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
447-646
               

               
Cow position:
               
chr1:12057898-12057707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
447-646
               

               
Cow position:
               
chr1:53424280-53424462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 13
               

               
Conread position:
               
447-646
               

               
Cow position:
               
chr1:70381059-70380869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
172, 9
               

               
Conread position:
               
447-646
               

               
Cow position:
               
chr1:101974056-101973862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
447-649
               

               
Cow position:
               
chr1:3440315-3440511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
176, 13
               

               
Conread position:
               
447-649
               

               
Cow position:
               
chr1:3932288-3932091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
175, 9
               

               
Conread position:
               
447-649
               

               
Cow position:
               
chr1:4208147-4207950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
447-649
               

               
Cow position:
               
chr1:9438939-9438747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
447-649
               

               
Cow position:
               
chr1:10364918-10365115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
447-649
               

               
Cow position:
               
chr1:21080088-21079891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
447-649
               

               
Cow position:
               
chr1:32795553-32795750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
447-649
               

               
Cow position:
               
chr1:52380796-52380993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
447-652
               

               
Cow position:
               
chr1:56475352-56475547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
447-652
               

               
Cow position:
               
chr1:68950759-68950954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
176, 13
               

               
Conread position:
               
447-652
               

               
Cow position:
               
chr1:71081491-71081296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
447-652
               

               
Cow position:
               
chr1:98559265-98559465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
448-647
               

               
Cow position:
               
chr1:94464466-94464656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
176, 13
               

               
Conread position:
               
448-652
               

               
Cow position:
               
chr1:82163444-82163245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
449-642
               

               
Cow position:
               
chr1:31238835-31238651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
452-631
               

               
Cow position:
               
chr1:90391525-90391354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
452-649
               

               
Cow position:
               
chr1:72807935-72808128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
453-652
               

               
Cow position:
               
chr1:15743177-15743372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
457-649
               

               
Cow position:
               
chr1:19793064-19793247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
167, 30
               

               
Conread position:
               
483-652
               

               
Cow position:
               
chr1:27494619-27494792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
501-634
               

               
Cow position:
               
chr1:44837122-44836989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
501-643
               

               
Cow position:
               
chr1:35785171-35785317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
501-652
               

               
Cow position:
               
chr1:15049205-15049354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
501-652
               

               
Cow position:
               
chr1:74302716-74302565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
504-652
               

               
Cow position:
               
chr1:44229615-44229767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
505-634
               

               
Cow position:
               
chr1:23634779-23634652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
506-646
               

               
Cow position:
               
chr1:102290451-102290308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
507-652
               

               
Cow position:
               
chr1:81362683-81362829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
508-652
               

               
Cow position:
               
chr1:81356890-81356742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
511-652
               

               
Cow position:
               
chr1:86574235-86574379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
518-652
               

               
Cow position:
               
chr1:23371146-23371012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 21
               
Show alignments to all cow chromosomes.