Cow genome map

Conread name: Liv1-LVRM1G090189

Conread position: 248-645
Cow position: chr5:17646154-17645759 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 72

Conread position: 248-652
Cow position: chr5:45704944-45705346 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 93

Conread position: 251-633
Cow position: chr5:6576664-6576281 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 64

Conread position: 256-652
Cow position: chr5:41952145-41951729 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 73

Conread position: 259-649
Cow position: chr5:57336428-57336032 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 262-629
Cow position: chr5:75755521-75755879 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 136

Conread position: 263-634
Cow position: chr5:31916565-31916923 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 108, 63

Conread position: 267-564
Cow position: chr5:41356889-41356601 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 45

Conread position: 267-610
Cow position: chr5:24643916-24643586 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 106, 21

Conread position: 267-632
Cow position: chr5:32965125-32964750 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 134

Conread position: 267-644
Cow position: chr5:6031928-6032301 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 83

Conread position: 267-644
Cow position: chr5:73485955-73485560 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 245

Conread position: 267-646
Cow position: chr5:18558460-18558090 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 129

Conread position: 267-646
Cow position: chr5:19978970-19978587 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 132

Conread position: 267-646
Cow position: chr5:29762869-29763231 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 267-646
Cow position: chr5:41411494-41411114 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 132

Conread position: 267-646
Cow position: chr5:64779063-64778673 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 137

Conread position: 267-652
Cow position: chr5:22857692-22857298 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 278
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 37, 136

Conread position: 267-652
Cow position: chr5:34285532-34285153 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 244
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 104, 77

Conread position: 267-652
Cow position: chr5:68593377-68593755 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 32

Conread position: 268-455
Cow position: chr5:31098301-31098116 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 105, 131

Conread position: 268-618
Cow position: chr5:26135322-26134972 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 97

Conread position: 268-628
Cow position: chr5:10262330-10261970 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 114

Conread position: 268-648
Cow position: chr5:68337546-68337192 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 71

Conread position: 268-652
Cow position: chr5:28947458-28947071 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 268-652
Cow position: chr5:43991228-43991611 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 258
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 100, 34

Conread position: 271-455
Cow position: chr5:10479755-10479572 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 100, 129

Conread position: 271-628
Cow position: chr5:18883662-18883304 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 143

Conread position: 271-628
Cow position: chr5:31560193-31560558 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 100, 44

Conread position: 271-633
Cow position: chr5:51501832-51502195 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 128

Conread position: 271-635
Cow position: chr5:33775819-33775474 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 62, 22

Conread position: 271-646
Cow position: chr5:10542722-10542348 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 68

Conread position: 271-646
Cow position: chr5:26100675-26101063 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 16

Conread position: 271-646
Cow position: chr5:27490923-27491302 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 257
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 128

Conread position: 271-649
Cow position: chr5:3544256-3544628 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 128

Conread position: 271-652
Cow position: chr5:62377322-62377699 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 253
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 101, 67

Conread position: 272-454
Cow position: chr5:50604400-50604224 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 102, 44

Conread position: 272-455
Cow position: chr5:6615344-6615162 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 127

Conread position: 272-455
Cow position: chr5:14942867-14942685 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 99, 127

Conread position: 272-455
Cow position: chr5:23957377-23957195 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 99, 127

Conread position: 272-455
Cow position: chr5:39216288-39216106 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 99, 127

Conread position: 272-455
Cow position: chr5:50675638-50675456 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 99, 127

Conread position: 272-455
Cow position: chr5:66910053-66910235 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 99, 127

Conread position: 272-467
Cow position: chr5:54867978-54868177 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 99, 127

Conread position: 272-489
Cow position: chr5:30157309-30157537 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 99, 127

Conread position: 272-497
Cow position: chr5:2695853-2695617 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 127

Conread position: 272-499
Cow position: chr5:2203442-2203204 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 99, 127

Conread position: 272-499
Cow position: chr5:10299417-10299655 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 99, 127

Conread position: 272-499
Cow position: chr5:13630545-13630307 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 99, 127

Conread position: 272-506
Cow position: chr5:59072095-59071849 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 99, 128

Conread position: 272-508
Cow position: chr5:27655693-27655919 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 99, 125

Conread position: 272-529
Cow position: chr5:37609993-37609736 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 159
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 95, 128

Conread position: 272-554
Cow position: chr5:48534806-48535088 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 183, 99

Conread position: 272-562
Cow position: chr5:38848636-38848345 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 99, 127

Conread position: 272-566
Cow position: chr5:2704613-2704307 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 133

Conread position: 272-572
Cow position: chr5:29769008-29769310 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 128

Conread position: 272-590
Cow position: chr5:9091473-9091158 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 119

Conread position: 272-592
Cow position: chr5:5682562-5682239 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-601
Cow position: chr5:24633090-24632760 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-605
Cow position: chr5:24158884-24159218 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 127

Conread position: 272-612
Cow position: chr5:59146326-59146667 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-622
Cow position: chr5:36907113-36906763 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-629
Cow position: chr5:73444350-73444706 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 263
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 99, 71

Conread position: 272-630
Cow position: chr5:4388128-4388489 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 123

Conread position: 272-633
Cow position: chr5:4434555-4434192 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 128

Conread position: 272-634
Cow position: chr5:8178088-8178446 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 99

Conread position: 272-634
Cow position: chr5:15723378-15723003 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 16

Conread position: 272-634
Cow position: chr5:15761420-15761056 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 43

Conread position: 272-634
Cow position: chr5:25920825-25920475 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 175, 97

Conread position: 272-634
Cow position: chr5:29223310-29222953 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 48

Conread position: 272-634
Cow position: chr5:37735325-37735687 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-634
Cow position: chr5:47471342-47471708 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 89

Conread position: 272-635
Cow position: chr5:41603212-41603592 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 51, 32

Conread position: 272-636
Cow position: chr5:3789177-3789537 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-636
Cow position: chr5:53834603-53834966 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 171, 89

Conread position: 272-639
Cow position: chr5:25912682-25913035 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 99, 68

Conread position: 272-643
Cow position: chr5:12921348-12921718 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 7

Conread position: 272-643
Cow position: chr5:23353690-23354061 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 96

Conread position: 272-643
Cow position: chr5:27178598-27178956 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 99, 142

Conread position: 272-643
Cow position: chr5:52829829-52829466 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 48

Conread position: 272-643
Cow position: chr5:62159975-62159606 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 87

Conread position: 272-644
Cow position: chr5:49521659-49522029 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 42

Conread position: 272-645
Cow position: chr5:10853881-10853507 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 42

Conread position: 272-645
Cow position: chr5:18250002-18250374 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-645
Cow position: chr5:51684673-51684293 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 128

Conread position: 272-646
Cow position: chr5:1338972-1338593 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 28

Conread position: 272-646
Cow position: chr5:2917413-2917785 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 53

Conread position: 272-646
Cow position: chr5:2976735-2977113 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 127

Conread position: 272-646
Cow position: chr5:3501179-3500800 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:6151883-6151504 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 123

Conread position: 272-646
Cow position: chr5:6455714-6455335 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 123

Conread position: 272-646
Cow position: chr5:6585504-6585126 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:6772517-6772893 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 107

Conread position: 272-646
Cow position: chr5:7396198-7396571 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 14

Conread position: 272-646
Cow position: chr5:10066601-10066222 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 128

Conread position: 272-646
Cow position: chr5:12133543-12133921 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 126

Conread position: 272-646
Cow position: chr5:14636629-14636251 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:14905102-14904754 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 67

Conread position: 272-646
Cow position: chr5:18119026-18118647 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:18491355-18491732 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:18667256-18667635 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 123

Conread position: 272-646
Cow position: chr5:21827775-21828143 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 185, 71

Conread position: 272-646
Cow position: chr5:24101599-24101978 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:24298962-24299341 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:29742608-29742233 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 113

Conread position: 272-646
Cow position: chr5:32755495-32755123 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:41548058-41547691 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 126

Conread position: 272-646
Cow position: chr5:42283119-42283491 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 270
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:44709433-44709044 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 122

Conread position: 272-646
Cow position: chr5:45179897-45179519 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:46707595-46707964 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 20

Conread position: 272-646
Cow position: chr5:46735327-46734949 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:46779465-46779842 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 127

Conread position: 272-646
Cow position: chr5:47560612-47560232 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:47872157-47871784 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 110

Conread position: 272-646
Cow position: chr5:49221544-49221171 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:54136689-54136310 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:54927970-54927593 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:54930298-54929921 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:58770921-58770544 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 114

Conread position: 272-646
Cow position: chr5:62436072-62436444 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:64061277-64061655 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-646
Cow position: chr5:71457097-71456720 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 99, 116

Conread position: 272-647
Cow position: chr5:46667023-46667403 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-648
Cow position: chr5:6572288-6571923 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 99, 71

Conread position: 272-648
Cow position: chr5:10921794-10922176 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-648
Cow position: chr5:19970083-19969715 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 88, 73

Conread position: 272-648
Cow position: chr5:42676210-42676572 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 95

Conread position: 272-649
Cow position: chr5:295214-295593 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 127

Conread position: 272-649
Cow position: chr5:443360-442977 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:1059618-1059235 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:1382930-1383305 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:4015923-4015540 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 127

Conread position: 272-649
Cow position: chr5:4963431-4963054 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 78

Conread position: 272-649
Cow position: chr5:5106174-5106555 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 43

Conread position: 272-649
Cow position: chr5:6125213-6124831 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:9003161-9002779 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 54

Conread position: 272-649
Cow position: chr5:10772876-10772498 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 27

Conread position: 272-649
Cow position: chr5:10840520-10840136 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 96, 127

Conread position: 272-649
Cow position: chr5:11632036-11631653 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:14543352-14542969 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:20108078-20107698 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:24577385-24577768 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 127

Conread position: 272-649
Cow position: chr5:29256262-29255882 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 23

Conread position: 272-649
Cow position: chr5:29634378-29634761 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:31709249-31709632 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:34191873-34192251 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 49

Conread position: 272-649
Cow position: chr5:34683411-34683030 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 128

Conread position: 272-649
Cow position: chr5:36370043-36369660 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 116

Conread position: 272-649
Cow position: chr5:41066974-41067342 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 99

Conread position: 272-649
Cow position: chr5:41488619-41489001 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:44617094-44617477 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:46817153-46816771 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:51166360-51165978 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:53075922-53075538 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 128

Conread position: 272-649
Cow position: chr5:54786159-54785776 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 123

Conread position: 272-649
Cow position: chr5:54952173-54951790 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 127

Conread position: 272-649
Cow position: chr5:58191866-58192247 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 128

Conread position: 272-649
Cow position: chr5:58198959-58199341 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-649
Cow position: chr5:72856823-72857207 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-650
Cow position: chr5:49117402-49117018 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-651
Cow position: chr5:710202-709818 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-651
Cow position: chr5:37380036-37380420 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-651
Cow position: chr5:51746173-51746552 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 272-652
Cow position: chr5:5937256-5937641 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 64

Conread position: 272-652
Cow position: chr5:18405102-18404723 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 13

Conread position: 272-652
Cow position: chr5:18901283-18901649 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 111

Conread position: 272-652
Cow position: chr5:26096234-26096606 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 96

Conread position: 272-652
Cow position: chr5:32811078-32810695 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 114

Conread position: 272-652
Cow position: chr5:35446666-35446300 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 100, 32

Conread position: 272-652
Cow position: chr5:46626326-46625940 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 37

Conread position: 272-652
Cow position: chr5:49565526-49565899 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 353, 25

Conread position: 272-652
Cow position: chr5:54721604-54721983 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 124

Conread position: 272-652
Cow position: chr5:64845315-64844933 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 60

Conread position: 273-445
Cow position: chr5:39750071-39749900 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 98, 126

Conread position: 273-496
Cow position: chr5:72346162-72345914 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 61, 141

Conread position: 273-505
Cow position: chr5:65597381-65597618 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 98, 109

Conread position: 273-523
Cow position: chr5:46685665-46685413 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 98, 125

Conread position: 273-635
Cow position: chr5:31120256-31119876 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 126

Conread position: 273-635
Cow position: chr5:59770997-59771360 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 242
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 95, 115

Conread position: 273-646
Cow position: chr5:21189171-21189546 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 122

Conread position: 273-646
Cow position: chr5:46676563-46676941 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 126

Conread position: 273-646
Cow position: chr5:47342824-47343201 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 107

Conread position: 273-646
Cow position: chr5:59064394-59064771 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 115

Conread position: 273-649
Cow position: chr5:52823257-52822876 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 126

Conread position: 273-651
Cow position: chr5:23754399-23754024 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 245
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 99, 122

Conread position: 273-651
Cow position: chr5:48026219-48026602 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 115

Conread position: 273-652
Cow position: chr5:7552732-7553096 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 98, 48

Conread position: 273-652
Cow position: chr5:21187884-21188269 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 126

Conread position: 273-652
Cow position: chr5:34670139-34669760 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 274
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 12, 87

Conread position: 273-652
Cow position: chr5:41391679-41392063 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 82

Conread position: 273-652
Cow position: chr5:47854785-47855161 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 274-635
Cow position: chr5:46671561-46671917 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 78

Conread position: 274-642
Cow position: chr5:4629719-4630078 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 97, 108

Conread position: 274-643
Cow position: chr5:55631015-55631385 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 125

Conread position: 274-652
Cow position: chr5:23845591-23845219 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 123

Conread position: 275-646
Cow position: chr5:23829223-23828869 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 77

Conread position: 276-646
Cow position: chr5:34708722-34709097 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 119

Conread position: 277-646
Cow position: chr5:34299846-34300206 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 151, 94

Conread position: 277-652
Cow position: chr5:48574864-48574496 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 7

Conread position: 279-630
Cow position: chr5:26466596-26466932 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 92, 31

Conread position: 279-652
Cow position: chr5:40270883-40270515 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 235
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 178, 92

Conread position: 281-605
Cow position: chr5:17387459-17387134 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 114

Conread position: 281-628
Cow position: chr5:54088688-54089019 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 159, 69

Conread position: 281-652
Cow position: chr5:58461739-58461361 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 172, 87

Conread position: 284-593
Cow position: chr5:71738075-71738382 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 66, 79

Conread position: 284-611
Cow position: chr5:30294270-30294592 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 67, 73

Conread position: 285-646
Cow position: chr5:54336867-54337230 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 43

Conread position: 286-644
Cow position: chr5:15677024-15677380 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 113

Conread position: 286-649
Cow position: chr5:4754170-4753801 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 113

Conread position: 287-646
Cow position: chr5:12212497-12212861 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 112

Conread position: 291-612
Cow position: chr5:18703457-18703142 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 80, 108

Conread position: 291-652
Cow position: chr5:21524013-21524383 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 116

Conread position: 291-652
Cow position: chr5:25927470-25927094 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 80, 108

Conread position: 294-646
Cow position: chr5:41524029-41523671 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 204

Conread position: 298-530
Cow position: chr5:29458891-29459123 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 73, 101

Conread position: 299-652
Cow position: chr5:5716099-5715754 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 128, 72

Conread position: 299-652
Cow position: chr5:50899610-50899958 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 59, 97

Conread position: 300-652
Cow position: chr5:57936145-57935783 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 72, 99

Conread position: 301-630
Cow position: chr5:76099052-76098722 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 70, 94

Conread position: 301-634
Cow position: chr5:30582304-30582638 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 98

Conread position: 301-649
Cow position: chr5:445457-445811 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 98

Conread position: 301-649
Cow position: chr5:5924991-5924645 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 156, 70

Conread position: 301-649
Cow position: chr5:26052709-26053063 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 98

Conread position: 302-649
Cow position: chr5:12337253-12337605 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 97

Conread position: 303-646
Cow position: chr5:26073806-26073460 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 68, 97

Conread position: 304-648
Cow position: chr5:8997025-8996683 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 95

Conread position: 307-649
Cow position: chr5:55722513-55722861 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 92

Conread position: 307-652
Cow position: chr5:32088788-32088445 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 64, 206

Conread position: 308-648
Cow position: chr5:18126609-18126942 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 64

Conread position: 308-649
Cow position: chr5:41586259-41586606 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 91

Conread position: 309-652
Cow position: chr5:16085820-16085475 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 18

Conread position: 310-455
Cow position: chr5:742756-742616 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 310-631
Cow position: chr5:27196073-27195753 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 61, 87

Conread position: 310-645
Cow position: chr5:24088065-24087723 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 86

Conread position: 311-630
Cow position: chr5:40929031-40928718 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 19

Conread position: 312-590
Cow position: chr5:46650081-46650365 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 92

Conread position: 313-649
Cow position: chr5:4683509-4683169 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 13

Conread position: 314-634
Cow position: chr5:42743784-42744102 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 37

Conread position: 315-645
Cow position: chr5:1395466-1395135 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 44

Conread position: 315-652
Cow position: chr5:14551609-14551266 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 84

Conread position: 319-643
Cow position: chr5:7141104-7140779 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 80

Conread position: 320-649
Cow position: chr5:6694531-6694866 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 51, 80

Conread position: 321-611
Cow position: chr5:26595851-26596146 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 50, 76

Conread position: 322-634
Cow position: chr5:58245331-58245644 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 49, 73

Conread position: 322-649
Cow position: chr5:13807752-13807429 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 49, 77

Conread position: 322-649
Cow position: chr5:35207241-35207568 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 78

Conread position: 323-632
Cow position: chr5:28223440-28223749 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 76

Conread position: 325-648
Cow position: chr5:4165633-4165956 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 20

Conread position: 328-652
Cow position: chr5:41980421-41980720 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 57

Conread position: 329-646
Cow position: chr5:44275607-44275923 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 52

Conread position: 336-649
Cow position: chr5:29558610-29558921 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 63

Conread position: 337-646
Cow position: chr5:6840184-6839865 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 13

Conread position: 338-649
Cow position: chr5:39362887-39363204 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 30, 61

Conread position: 357-649
Cow position: chr5:59782728-59782434 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 42

Conread position: 358-649
Cow position: chr5:75755082-75754792 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 39

Conread position: 358-652
Cow position: chr5:1105837-1105542 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 42

Conread position: 359-643
Cow position: chr5:7175334-7175619 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 12, 40

Conread position: 361-631
Cow position: chr5:34527615-34527875 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 21

Conread position: 370-611
Cow position: chr5:60446481-60446721 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 84, 29

Conread position: 370-646
Cow position: chr5:43437894-43437614 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 84, 28

Conread position: 374-634
Cow position: chr5:46796960-46797212 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 24

Conread position: 376-649
Cow position: chr5:28012911-28013189 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 22

Conread position: 379-646
Cow position: chr5:7498928-7498657 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 67, 19

Conread position: 379-646
Cow position: chr5:58353275-58353533 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 19

Conread position: 384-643
Cow position: chr5:35180191-35180450 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 14

Conread position: 393-634
Cow position: chr5:45941922-45941686 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 112

Conread position: 398-634
Cow position: chr5:280105-279868 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 59, 116

Conread position: 400-648
Cow position: chr5:50923768-50923515 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 119

Conread position: 403-649
Cow position: chr5:2395229-2394976 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 96

Conread position: 405-646
Cow position: chr5:43984165-43984412 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 73

Conread position: 406-649
Cow position: chr5:7042324-7042573 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 11

Conread position: 420-635
Cow position: chr5:6219040-6219257 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 116

Conread position: 422-652
Cow position: chr5:50728397-50728638 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 124

Conread position: 429-634
Cow position: chr5:59268522-59268722 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 73

Conread position: 433-652
Cow position: chr5:28016176-28016391 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 55, 76

Conread position: 439-652
Cow position: chr5:36724598-36724393 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 36

Conread position: 440-645
Cow position: chr5:66256760-66256952 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 442-646
Cow position: chr5:12872575-12872772 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 60

Conread position: 442-649
Cow position: chr5:59146737-59146940 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 62

Conread position: 443-646
Cow position: chr5:14630800-14630607 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 68

Conread position: 443-648
Cow position: chr5:39448417-39448219 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 11, 67

Conread position: 443-652
Cow position: chr5:15362175-15362372 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 13

Conread position: 445-652
Cow position: chr5:72007760-72007555 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 11

Conread position: 447-631
Cow position: chr5:37384400-37384226 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 9

Conread position: 447-632
Cow position: chr5:40828245-40828070 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 38, 61

Conread position: 447-632
Cow position: chr5:69519735-69519910 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 447-634
Cow position: chr5:5787195-5787018 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 13

Conread position: 447-634
Cow position: chr5:29968742-29968920 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 447-649
Cow position: chr5:6060496-6060300 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 13

Conread position: 447-649
Cow position: chr5:58900909-58900712 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 9

Conread position: 447-649
Cow position: chr5:67813997-67814194 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 172, 9

Conread position: 447-652
Cow position: chr5:12558446-12558242 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 176, 13

Conread position: 447-652
Cow position: chr5:14558323-14558122 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 172, 13

Conread position: 447-652
Cow position: chr5:39749307-39749113 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 9

Conread position: 447-652
Cow position: chr5:39936234-39936433 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 41, 62

Conread position: 447-652
Cow position: chr5:66337986-66338180 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 10

Conread position: 453-630
Cow position: chr5:27063099-27062931 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 56

Conread position: 453-634
Cow position: chr5:411579-411407 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 35, 47

Conread position: 453-646
Cow position: chr5:53185363-53185175 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 51

Conread position: 453-649
Cow position: chr5:14313410-14313598 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 47

Conread position: 453-652
Cow position: chr5:54125204-54125405 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 65

Conread position: 456-652
Cow position: chr5:54454639-54454822 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 48

Conread position: 460-652
Cow position: chr5:25496262-25496075 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 49

Conread position: 460-652
Cow position: chr5:47600915-47601098 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 49

Conread position: 465-651
Cow position: chr5:31217244-31217422 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 23, 36

Conread position: 468-649
Cow position: chr5:54868371-54868548 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 41

Conread position: 481-652
Cow position: chr5:40891325-40891157 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 58

Conread position: 487-652
Cow position: chr5:72345676-72345507 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 51

Conread position: 501-634
Cow position: chr5:32081369-32081236 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 25

Conread position: 501-649
Cow position: chr5:19780856-19780704 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 39

Conread position: 502-649
Cow position: chr5:34886492-34886345 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 38

Conread position: 504-652
Cow position: chr5:15477892-15478043 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 121, 19

Conread position: 508-646
Cow position: chr5:742272-742132 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 15

Show alignments to all cow chromosomes.