Cow genome map


           Conread name:
           Lng1-LNG010009D01
        

               Conread position:
               8-144
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               27-495
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 150
               

               Conread position:
               30-495
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 202
               

               Conread position:
               31-321
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               128, 225
               

               Conread position:
               31-323
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               181, 45
               

               Conread position:
               31-503
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 119
               

               Conread position:
               32-502
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               33-155
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-260
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               215, 74
               

               Conread position:
               35-321
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 78
               

               Conread position:
               35-322
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               26, 157
               

               Conread position:
               35-328
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 117
               

               Conread position:
               35-366
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               35-368
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 187
               

               Conread position:
               35-413
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               264
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               25, 88
               

               Conread position:
               35-493
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               301
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               383, 186
               

               Conread position:
               35-495
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 102
               

               Conread position:
               35-495
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 153
               

               Conread position:
               35-502
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               308
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               125, 196
               

               Conread position:
               35-502
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 157
               

               Conread position:
               36-279
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               27, 154
               

               Conread position:
               38-185
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-173
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-495
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 20
               

               Conread position:
               44-503
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 147
               

               Conread position:
               47-495
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               319
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               192, 16
               

               Conread position:
               47-520
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               335
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 108
               

               Conread position:
               48-494
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 58
               

               Conread position:
               54-344
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               192, 127
               

               Conread position:
               61-495
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 76
               

               Conread position:
               83-495
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 86
               

               Conread position:
               94-326
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               82, 235
               

               Conread position:
               190-502
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               229-495
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               264-495
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               296-495
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               307-463
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               308-494
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               308-496
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               315-503
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               34, 51
               
Show alignments to all cow chromosomes.