Cow genome map
| Conread name: | Lng1-LNG010009D01 |
| Conread position: | 23-180 |
| Cow position: | chr11:13029421-13029577 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 25-173 |
| Cow position: | chr11:10116015-10116163 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 36, 97 |
| Conread position: | 26-502 |
| Cow position: | chr11:53783281-53782796 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 201 |
| Conread position: | 30-340 |
| Cow position: | chr11:33288825-33289126 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 31-495 |
| Cow position: | chr11:86591041-86591518 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 34, 86 |
| Conread position: | 34-495 |
| Cow position: | chr11:36164581-36165053 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 102 |
| Conread position: | 34-518 |
| Cow position: | chr11:70665229-70664751 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 29 |
| Conread position: | 35-266 |
| Cow position: | chr11:4219826-4220059 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 35-289 |
| Cow position: | chr11:15959522-15959282 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 208, 59 |
| Conread position: | 35-324 |
| Cow position: | chr11:1296815-1296524 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 26, 261 |
| Conread position: | 35-328 |
| Cow position: | chr11:20722106-20721811 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 35-489 |
| Cow position: | chr11:52594971-52594548 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 383, 47 |
| Conread position: | 35-494 |
| Cow position: | chr11:78019195-78019613 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 322 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 208, 28 |
| Conread position: | 35-495 |
| Cow position: | chr11:81547311-81547763 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 35-502 |
| Cow position: | chr11:72953872-72953406 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 117 |
| Conread position: | 35-520 |
| Cow position: | chr11:39076135-39075659 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 175 |
| Conread position: | 36-151 |
| Cow position: | chr11:63648147-63648031 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 38-495 |
| Cow position: | chr11:1608548-1608095 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 98 |
| Conread position: | 38-495 |
| Cow position: | chr11:1690133-1690600 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 25 |
| Conread position: | 38-495 |
| Cow position: | chr11:42240148-42240611 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 249 |
| Conread position: | 43-281 |
| Cow position: | chr11:63659172-63658926 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 132, 189 |
| Conread position: | 47-192 |
| Cow position: | chr11:63990113-63990256 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 47-442 |
| Cow position: | chr11:68450606-68450197 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 47-495 |
| Cow position: | chr11:25541095-25540642 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 179, 91 |
| Conread position: | 47-496 |
| Cow position: | chr11:82114739-82115218 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 49-461 |
| Cow position: | chr11:2079252-2078845 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 53-495 |
| Cow position: | chr11:2856383-2856832 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 54-495 |
| Cow position: | chr11:42120124-42120554 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 9 |
| Conread position: | 65-465 |
| Cow position: | chr11:5197972-5197600 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 162, 78 |
| Conread position: | 101-491 |
| Cow position: | chr11:35647628-35647233 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 72, 97 |
| Conread position: | 124-450 |
| Cow position: | chr11:47312970-47313286 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-495 |
| Cow position: | chr11:65404285-65404552 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 275-495 |
| Cow position: | chr11:13029789-13030006 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 74, 124 |
| Conread position: | 304-495 |
| Cow position: | chr11:63990423-63990617 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 308-489 |
| Cow position: | chr11:63986915-63987101 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 308-493 |
| Cow position: | chr11:25651270-25651078 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 21 |
| Conread position: | 308-495 |
| Cow position: | chr11:60138684-60138494 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 308-497 |
| Cow position: | chr11:1296520-1296324 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 309-502 |
| Cow position: | chr11:63658778-63658573 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.