Cow genome map
| Conread name: | Lng1-LNG010009D01 |
| Conread position: | 26-326 |
| Cow position: | chr13:11228568-11228863 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 219, 101 |
| Conread position: | 28-502 |
| Cow position: | chr13:60174007-60174507 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 213 |
| Conread position: | 29-322 |
| Cow position: | chr13:3936936-3936640 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 30-307 |
| Cow position: | chr13:19469234-19468970 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 108, 5 |
| Conread position: | 33-489 |
| Cow position: | chr13:19449426-19448972 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 102 |
| Conread position: | 34-322 |
| Cow position: | chr13:43733455-43733170 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 34-496 |
| Cow position: | chr13:42715919-42715449 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 54 |
| Conread position: | 34-503 |
| Cow position: | chr13:17168399-17167954 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 24 |
| Conread position: | 35-143 |
| Cow position: | chr13:56340676-56340784 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-321 |
| Cow position: | chr13:24603468-24603756 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 166 |
| Conread position: | 35-328 |
| Cow position: | chr13:20911436-20911728 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 32, 110 |
| Conread position: | 35-495 |
| Cow position: | chr13:5445-5927 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 35-502 |
| Cow position: | chr13:21432856-21433331 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 63 |
| Conread position: | 38-343 |
| Cow position: | chr13:8933276-8933580 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 43-505 |
| Cow position: | chr13:55562547-55563005 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 47-318 |
| Cow position: | chr13:20774610-20774340 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 124 |
| Conread position: | 47-320 |
| Cow position: | chr13:20352342-20352077 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 47-322 |
| Cow position: | chr13:52050042-52050301 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 138 |
| Conread position: | 47-328 |
| Cow position: | chr13:17761948-17762232 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 109, 137 |
| Conread position: | 47-495 |
| Cow position: | chr13:18645117-18645550 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 33 |
| Conread position: | 47-495 |
| Cow position: | chr13:32313876-32314328 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 88 |
| Conread position: | 47-498 |
| Cow position: | chr13:47166223-47166686 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 143 |
| Conread position: | 50-175 |
| Cow position: | chr13:35997934-35998059 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-505 |
| Cow position: | chr13:34055484-34055950 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 44 |
| Conread position: | 58-280 |
| Cow position: | chr13:40113364-40113599 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 118, 181 |
| Conread position: | 71-502 |
| Cow position: | chr13:18323207-18323635 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 77-518 |
| Cow position: | chr13:52753206-52752764 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 22 |
| Conread position: | 79-495 |
| Cow position: | chr13:23439530-23439964 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 290 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 81-495 |
| Cow position: | chr13:36906302-36905870 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 95, 183 |
| Conread position: | 103-379 |
| Cow position: | chr13:20360695-20360968 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 90 |
| Conread position: | 297-498 |
| Cow position: | chr13:20911718-20911925 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 304-502 |
| Cow position: | chr13:17762228-17762424 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 139 |
| Conread position: | 309-478 |
| Cow position: | chr13:43733156-43732981 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 315-495 |
| Cow position: | chr13:56694484-56694670 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 34, 174 |
| Conread position: | 315-496 |
| Cow position: | chr13:52050317-52050495 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 137 |
| Conread position: | 333-503 |
| Cow position: | chr13:19468967-19468794 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 30 |
Show alignments to all cow chromosomes.