Cow genome map
| Conread name: | Lng1-LNG010009D01 |
| Conread position: | 6-449 |
| Cow position: | chr16:15224180-15224599 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 11 |
| Conread position: | 24-260 |
| Cow position: | chr16:17883338-17883572 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 94, 76 |
| Conread position: | 24-322 |
| Cow position: | chr16:33715501-33715209 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 166 |
| Conread position: | 28-496 |
| Cow position: | chr16:46164931-46165397 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 311 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 29-455 |
| Cow position: | chr16:52039999-52039548 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 300 |
| Conread position: | 30-174 |
| Cow position: | chr16:30617321-30617464 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 31-518 |
| Cow position: | chr16:35204003-35204486 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 105 |
| Conread position: | 33-460 |
| Cow position: | chr16:8507533-8507954 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 35-494 |
| Cow position: | chr16:10672177-10672646 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 35-496 |
| Cow position: | chr16:53590996-53591471 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 322 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 210, 101 |
| Conread position: | 35-502 |
| Cow position: | chr16:15925228-15924772 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 129 |
| Conread position: | 35-505 |
| Cow position: | chr16:37373434-37373906 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 310 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 26, 104 |
| Conread position: | 42-446 |
| Cow position: | chr16:45444612-45445006 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 138 |
| Conread position: | 47-193 |
| Cow position: | chr16:21441141-21440995 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 48-416 |
| Cow position: | chr16:53441787-53442126 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 49-371 |
| Cow position: | chr16:52106931-52106606 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 82, 183 |
| Conread position: | 49-371 |
| Cow position: | chr16:52110202-52109877 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 82, 183 |
| Conread position: | 50-328 |
| Cow position: | chr16:45239381-45239104 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 11, 150 |
| Conread position: | 51-216 |
| Cow position: | chr16:8852519-8852350 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 51-227 |
| Cow position: | chr16:52640069-52640241 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 64-495 |
| Cow position: | chr16:54483260-54482821 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 134 |
| Conread position: | 71-423 |
| Cow position: | chr16:11190338-11190684 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 147, 11 |
| Conread position: | 101-319 |
| Cow position: | chr16:42612162-42611938 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 165-495 |
| Cow position: | chr16:16126432-16126757 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 81, 23 |
| Conread position: | 186-502 |
| Cow position: | chr16:16719688-16720004 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 193-495 |
| Cow position: | chr16:33472468-33472774 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 222-438 |
| Cow position: | chr16:52640453-52640671 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 229-494 |
| Cow position: | chr16:21662712-21662448 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 232-502 |
| Cow position: | chr16:326730-326461 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 117, 8 |
| Conread position: | 277-518 |
| Cow position: | chr16:8852314-8852073 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 47 |
| Conread position: | 288-495 |
| Cow position: | chr16:33471971-33471761 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 308-495 |
| Cow position: | chr16:21439911-21439714 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 308-503 |
| Cow position: | chr16:31532554-31532758 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 312-495 |
| Cow position: | chr16:4898273-4898468 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 344-494 |
| Cow position: | chr16:33279523-33279369 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 366-504 |
| Cow position: | chr16:11600907-11601049 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 381-502 |
| Cow position: | chr16:52642958-52642834 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 79 |
Show alignments to all cow chromosomes.