Cow genome map
| Conread name: | Lng1-LNG010009D01 |
| Conread position: | 9-501 |
| Cow position: | chr17:906136-905634 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 159 |
| Conread position: | 27-193 |
| Cow position: | chr17:20743182-20743346 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 29-495 |
| Cow position: | chr17:26774739-26775221 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 121 |
| Conread position: | 34-300 |
| Cow position: | chr17:21332145-21332402 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 187, 88 |
| Conread position: | 34-328 |
| Cow position: | chr17:27722391-27722100 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 34-495 |
| Cow position: | chr17:23512503-23512971 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 8 |
| Conread position: | 35-194 |
| Cow position: | chr17:23520700-23520542 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 136, 29 |
| Conread position: | 35-337 |
| Cow position: | chr17:27762236-27762538 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 101, 197 |
| Conread position: | 35-358 |
| Cow position: | chr17:2028486-2028794 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 35-416 |
| Cow position: | chr17:5904447-5904074 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 265 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 35-459 |
| Cow position: | chr17:40227664-40228078 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 28 |
| Conread position: | 35-495 |
| Cow position: | chr17:3496226-3495784 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 234 |
| Conread position: | 35-495 |
| Cow position: | chr17:24846473-24846040 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 314 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 26, 163 |
| Conread position: | 37-495 |
| Cow position: | chr17:1368809-1368351 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 244 |
| Conread position: | 37-495 |
| Cow position: | chr17:20827813-20828297 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 38-491 |
| Cow position: | chr17:30472287-30472736 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 290 |
| Conread position: | 39-502 |
| Cow position: | chr17:9316604-9317061 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 36 |
| Conread position: | 44-495 |
| Cow position: | chr17:27176595-27176124 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 47-325 |
| Cow position: | chr17:25103209-25102929 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 47-502 |
| Cow position: | chr17:8244078-8244537 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 105 |
| Conread position: | 48-169 |
| Cow position: | chr17:4526588-4526709 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-505 |
| Cow position: | chr17:13455992-13455585 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 178-495 |
| Cow position: | chr17:1239651-1239972 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 277-495 |
| Cow position: | chr17:851872-852092 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 48 |
| Conread position: | 308-503 |
| Cow position: | chr17:27722100-27721896 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 309-494 |
| Cow position: | chr17:25102925-25102734 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 376-502 |
| Cow position: | chr17:21332537-21332667 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.