Cow genome map
| Conread name: | Lng1-LNG010009D01 |
| Conread position: | 25-495 |
| Cow position: | chr18:50044405-50044852 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 39 |
| Conread position: | 29-494 |
| Cow position: | chr18:1882723-1883173 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 31-430 |
| Cow position: | chr18:45116228-45115837 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 159 |
| Conread position: | 34-518 |
| Cow position: | chr18:22186081-22185598 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 35-173 |
| Cow position: | chr18:40230395-40230534 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 35-176 |
| Cow position: | chr18:36132308-36132167 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 35-193 |
| Cow position: | chr18:39193123-39193279 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 147, 98 |
| Conread position: | 35-193 |
| Cow position: | chr18:39194130-39194286 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 147, 98 |
| Conread position: | 35-328 |
| Cow position: | chr18:22615673-22615975 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 35-331 |
| Cow position: | chr18:42730506-42730800 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 35-368 |
| Cow position: | chr18:51737221-51736892 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 30 |
| Conread position: | 35-371 |
| Cow position: | chr18:48859626-48859290 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 154 |
| Conread position: | 35-418 |
| Cow position: | chr18:19420868-19421228 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 209, 47 |
| Conread position: | 35-495 |
| Cow position: | chr18:29654727-29654267 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 348 |
| Conread position: | 35-495 |
| Cow position: | chr18:34430679-34431153 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 61 |
| Conread position: | 35-495 |
| Cow position: | chr18:35513676-35513223 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 35-502 |
| Cow position: | chr18:35039532-35039045 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 35-505 |
| Cow position: | chr18:16370919-16370442 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 159 |
| Conread position: | 36-322 |
| Cow position: | chr18:40409351-40409645 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 203 |
| Conread position: | 37-260 |
| Cow position: | chr18:35863619-35863395 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 41-322 |
| Cow position: | chr18:16085638-16085922 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 47-317 |
| Cow position: | chr18:35867584-35867859 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 47-367 |
| Cow position: | chr18:56205348-56205666 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 192, 123 |
| Conread position: | 47-463 |
| Cow position: | chr18:42533892-42533463 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 47-502 |
| Cow position: | chr18:2787759-2788202 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 68 |
| Conread position: | 48-267 |
| Cow position: | chr18:24050106-24049893 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 178, 38 |
| Conread position: | 48-289 |
| Cow position: | chr18:35512849-35513087 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 107 |
| Conread position: | 48-428 |
| Cow position: | chr18:703903-704285 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 48-477 |
| Cow position: | chr18:46025604-46025162 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 48-495 |
| Cow position: | chr18:12290413-12289940 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 328 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 101, 134 |
| Conread position: | 52-279 |
| Cow position: | chr18:43623045-43622825 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 119, 29 |
| Conread position: | 58-455 |
| Cow position: | chr18:49973982-49974373 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 276 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 78-322 |
| Cow position: | chr18:56263877-56263637 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 125-518 |
| Cow position: | chr18:16096473-16096091 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 180, 21 |
| Conread position: | 179-450 |
| Cow position: | chr18:37166089-37165817 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 244-518 |
| Cow position: | chr18:36132124-36131852 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 252-495 |
| Cow position: | chr18:39193311-39193559 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 97, 72 |
| Conread position: | 252-503 |
| Cow position: | chr18:39194318-39194588 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 310-495 |
| Cow position: | chr18:39192379-39192570 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 39, 179 |
| Conread position: | 376-502 |
| Cow position: | chr18:48859061-48858934 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 21 |
Show alignments to all cow chromosomes.