Cow genome map
| Conread name: | Lng1-LNG010009D01 |
| Conread position: | 23-322 |
| Cow position: | chr2:54452735-54452449 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 262, 9 |
| Conread position: | 23-388 |
| Cow position: | chr2:10573306-10572970 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 186, 59 |
| Conread position: | 27-509 |
| Cow position: | chr2:41273919-41273435 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 162 |
| Conread position: | 28-518 |
| Cow position: | chr2:51204238-51203738 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 346 |
| Conread position: | 29-178 |
| Cow position: | chr2:1154468-1154322 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 29-279 |
| Cow position: | chr2:78077431-78077683 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 30-487 |
| Cow position: | chr2:42212750-42213212 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 337 |
| Conread position: | 31-246 |
| Cow position: | chr2:7880378-7880163 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 143, 192 |
| Conread position: | 31-382 |
| Cow position: | chr2:84150661-84151012 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 148 |
| Conread position: | 31-437 |
| Cow position: | chr2:32643785-32643380 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 106 |
| Conread position: | 33-446 |
| Cow position: | chr2:56035629-56035215 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 145 |
| Conread position: | 33-495 |
| Cow position: | chr2:12921847-12922305 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 25 |
| Conread position: | 34-494 |
| Cow position: | chr2:1631073-1630596 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 92 |
| Conread position: | 35-265 |
| Cow position: | chr2:50881384-50881618 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 35-323 |
| Cow position: | chr2:46011248-46011544 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 35-325 |
| Cow position: | chr2:46336549-46336253 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 101, 202 |
| Conread position: | 35-420 |
| Cow position: | chr2:39552087-39551703 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 35-494 |
| Cow position: | chr2:32424692-32425131 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 90 |
| Conread position: | 38-503 |
| Cow position: | chr2:75547687-75547223 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 39-397 |
| Cow position: | chr2:39339413-39339070 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 100, 184 |
| Conread position: | 46-448 |
| Cow position: | chr2:15560371-15559969 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 131 |
| Conread position: | 46-465 |
| Cow position: | chr2:15271654-15272074 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 133 |
| Conread position: | 47-328 |
| Cow position: | chr2:66127581-66127298 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 98, 64 |
| Conread position: | 47-502 |
| Cow position: | chr2:82122957-82123413 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 97 |
| Conread position: | 48-279 |
| Cow position: | chr2:74696829-74697056 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 54 |
| Conread position: | 48-322 |
| Cow position: | chr2:63795388-63795653 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 194, 96 |
| Conread position: | 49-348 |
| Cow position: | chr2:45907733-45908027 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 136 |
| Conread position: | 58-518 |
| Cow position: | chr2:76112131-76111703 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 62 |
| Conread position: | 99-331 |
| Cow position: | chr2:41041199-41041432 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 132-495 |
| Cow position: | chr2:35658994-35658638 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 114, 65 |
| Conread position: | 208-459 |
| Cow position: | chr2:37415153-37414899 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 226-496 |
| Cow position: | chr2:80430780-80431060 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 250-495 |
| Cow position: | chr2:78719381-78719631 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 302-495 |
| Cow position: | chr2:41041423-41041636 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 304-493 |
| Cow position: | chr2:78076372-78076562 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 309-495 |
| Cow position: | chr2:46011551-46011741 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 309-502 |
| Cow position: | chr2:46336249-46336047 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 148 |
| Conread position: | 309-502 |
| Cow position: | chr2:63795660-63795857 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 310-502 |
| Cow position: | chr2:36479186-36479385 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 343-495 |
| Cow position: | chr2:7880132-7879978 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 348-502 |
| Cow position: | chr2:45779240-45779080 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 403-502 |
| Cow position: | chr2:50882923-50883026 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.