Cow genome map


           Conread name:
           Lng1-LNG010009D01
        

               Conread position:
               35-176
               

               Cow position:
               chr20:31174148-31174005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               35-277
               

               Cow position:
               chr20:35869196-35868952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 158
               

               Conread position:
               35-491
               

               Cow position:
               chr20:39270564-39271023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 31
               

               Conread position:
               35-495
               

               Cow position:
               chr20:35169515-35169047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 190
               

               Conread position:
               35-497
               

               Cow position:
               chr20:19002505-19002059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               244, 99
               

               Conread position:
               47-332
               

               Cow position:
               chr20:14393534-14393813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               199, 128
               

               Conread position:
               49-267
               

               Cow position:
               chr20:31830114-31829907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               194, 33
               

               Conread position:
               51-489
               

               Cow position:
               chr20:3865757-3865328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               293
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 190
               

               Conread position:
               59-503
               

               Cow position:
               chr20:23291868-23292317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 62
               

               Conread position:
               244-495
               

               Cow position:
               chr20:31829896-31829630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 55
               

               Conread position:
               297-489
               

               Cow position:
               chr20:1411232-1411430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               298-502
               

               Cow position:
               chr20:11000080-11000282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 7
               
Show alignments to all cow chromosomes.