Cow genome map
| Conread name: | Lng1-LNG010009D01 |
| Conread position: | 14-322 |
| Cow position: | chr5:63579779-63580081 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 16-282 |
| Cow position: | chr5:73176796-73176539 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 227, 7 |
| Conread position: | 28-416 |
| Cow position: | chr5:37567625-37567260 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 270 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 232, 161 |
| Conread position: | 32-475 |
| Cow position: | chr5:43147396-43146977 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 312 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 35-134 |
| Cow position: | chr5:20659180-20659081 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-329 |
| Cow position: | chr5:34182593-34182301 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 153 |
| Conread position: | 35-457 |
| Cow position: | chr5:49082816-49082370 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 308 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 35-467 |
| Cow position: | chr5:20013946-20014377 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 134 |
| Conread position: | 35-495 |
| Cow position: | chr5:64172817-64173303 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 167 |
| Conread position: | 35-498 |
| Cow position: | chr5:7867841-7868323 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 314 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 102, 26 |
| Conread position: | 35-502 |
| Cow position: | chr5:41513933-41514397 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 144 |
| Conread position: | 35-503 |
| Cow position: | chr5:35712549-35712057 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 323 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 83, 179 |
| Conread position: | 38-495 |
| Cow position: | chr5:4263423-4262955 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 321 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 99, 169 |
| Conread position: | 38-495 |
| Cow position: | chr5:4426747-4427187 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 56 |
| Conread position: | 39-495 |
| Cow position: | chr5:10885245-10884810 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 40 |
| Conread position: | 47-212 |
| Cow position: | chr5:47538921-47538750 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 47-392 |
| Cow position: | chr5:44843715-44843352 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 99, 35 |
| Conread position: | 47-517 |
| Cow position: | chr5:7413845-7414301 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 142 |
| Conread position: | 49-495 |
| Cow position: | chr5:49088406-49088842 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 52-495 |
| Cow position: | chr5:18268739-18268321 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 7 |
| Conread position: | 57-502 |
| Cow position: | chr5:65671007-65670562 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 100 |
| Conread position: | 70-465 |
| Cow position: | chr5:7414307-7414698 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 143 |
| Conread position: | 84-328 |
| Cow position: | chr5:63126104-63125857 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 88-495 |
| Cow position: | chr5:53959205-53958795 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 37 |
| Conread position: | 99-403 |
| Cow position: | chr5:20744300-20744603 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 147, 182 |
| Conread position: | 101-392 |
| Cow position: | chr5:55349856-55349576 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 138, 86 |
| Conread position: | 125-502 |
| Cow position: | chr5:20658812-20658438 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 165-502 |
| Cow position: | chr5:57408641-57408986 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 152 |
| Conread position: | 196-495 |
| Cow position: | chr5:27409403-27409679 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 229-502 |
| Cow position: | chr5:35545459-35545172 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 299-488 |
| Cow position: | chr5:63125866-63125674 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 308-502 |
| Cow position: | chr5:44766221-44766422 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 312-514 |
| Cow position: | chr5:74674829-74674627 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 23 |
Show alignments to all cow chromosomes.