Cow genome map
| Conread name: | Lng1-LNG010010A06 |
| Conread position: | 1-141 |
| Cow position: | chr1:25383514-25383374 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 90, 123 |
| Conread position: | 1-169 |
| Cow position: | chr1:82993411-82993243 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-201 |
| Cow position: | chr1:5623697-5623897 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 119, 126 |
| Conread position: | 1-237 |
| Cow position: | chr1:55135685-55135458 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 195, 65 |
| Conread position: | 1-244 |
| Cow position: | chr1:12222753-12222996 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-245 |
| Cow position: | chr1:3035141-3035383 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 115, 101 |
| Conread position: | 1-264 |
| Cow position: | chr1:100707842-100708105 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 217, 77 |
| Conread position: | 1-273 |
| Cow position: | chr1:51983439-51983178 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 64 |
| Conread position: | 1-273 |
| Cow position: | chr1:53520758-53520481 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 103 |
| Conread position: | 1-273 |
| Cow position: | chr1:54206967-54207241 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 64 |
| Conread position: | 1-273 |
| Cow position: | chr1:67821358-67821638 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 239 |
| Conread position: | 1-275 |
| Cow position: | chr1:31414107-31414401 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 102, 86 |
| Conread position: | 2-169 |
| Cow position: | chr1:5990765-5990604 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 2-195 |
| Cow position: | chr1:26186616-26186809 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 2-201 |
| Cow position: | chr1:15050209-15050014 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-202 |
| Cow position: | chr1:47543522-47543323 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 2-270 |
| Cow position: | chr1:68087721-68087448 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-270 |
| Cow position: | chr1:71946521-71946782 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 18 |
| Conread position: | 2-273 |
| Cow position: | chr1:17937641-17937913 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 2-273 |
| Cow position: | chr1:71822068-71822341 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-273 |
| Cow position: | chr1:89344760-89344490 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 211 |
| Conread position: | 2-273 |
| Cow position: | chr1:102553083-102552812 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 156, 76 |
| Conread position: | 2-275 |
| Cow position: | chr1:17876139-17876412 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 2-276 |
| Cow position: | chr1:74822306-74822026 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-294 |
| Cow position: | chr1:23634051-23634338 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-294 |
| Cow position: | chr1:60032748-60033045 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 65 |
| Conread position: | 4-235 |
| Cow position: | chr1:68855023-68854799 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 214, 74 |
| Conread position: | 16-273 |
| Cow position: | chr1:93412760-93413020 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 195, 93 |
| Conread position: | 144-273 |
| Cow position: | chr1:77100186-77100319 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.