Cow genome map


           Conread name:
           Lng1-LNG010010A06
        

               Conread position:
               1-105
               

               Cow position:
               chr12:5905864-5905760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-275
               

               Cow position:
               chr12:19420129-19420408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 43
               

               Conread position:
               2-170
               

               Cow position:
               chr12:18577655-18577486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               105, 76
               

               Conread position:
               2-176
               

               Cow position:
               chr12:6698586-6698410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 33
               

               Conread position:
               2-233
               

               Cow position:
               chr12:4371039-4370808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               208, 119
               

               Conread position:
               2-260
               

               Cow position:
               chr12:40428516-40428772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               215, 131
               

               Conread position:
               2-269
               

               Cow position:
               chr12:8172977-8172706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               151, 250
               

               Conread position:
               2-270
               

               Cow position:
               chr12:379540-379267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               2-273
               

               Cow position:
               chr12:18545676-18545404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 64
               

               Conread position:
               2-276
               

               Cow position:
               chr12:31835707-31835432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 35
               
Show alignments to all cow chromosomes.