Cow genome map
| Conread name: | Lng1-LNG010010A06 |
| Conread position: | 1-113 |
| Cow position: | chr5:53835585-53835474 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-168 |
| Cow position: | chr5:33080918-33081086 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 1-241 |
| Cow position: | chr5:66064999-66064758 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 1-273 |
| Cow position: | chr5:64823442-64823706 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 101 |
| Conread position: | 1-276 |
| Cow position: | chr5:4710274-4710545 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 109, 41 |
| Conread position: | 1-276 |
| Cow position: | chr5:7193302-7193027 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 74 |
| Conread position: | 1-276 |
| Cow position: | chr5:26377796-26378072 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 120 |
| Conread position: | 2-201 |
| Cow position: | chr5:6219974-6219774 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 2-230 |
| Cow position: | chr5:75259698-75259469 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 2-273 |
| Cow position: | chr5:18557523-18557795 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 3-108 |
| Cow position: | chr5:72605918-72605813 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-228 |
| Cow position: | chr5:38683224-38683008 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 215, 75 |
| Conread position: | 3-273 |
| Cow position: | chr5:7397415-7397144 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 3-273 |
| Cow position: | chr5:13908742-13909008 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 218, 108 |
| Conread position: | 3-273 |
| Cow position: | chr5:76097596-76097866 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-276 |
| Cow position: | chr5:62826901-62827159 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 58 |
| Conread position: | 19-294 |
| Cow position: | chr5:34115515-34115218 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 68-273 |
| Cow position: | chr5:44735212-44735431 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 103-291 |
| Cow position: | chr5:6670387-6670577 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 116-270 |
| Cow position: | chr5:53776228-53776083 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 106, 15 |
| Conread position: | 118-275 |
| Cow position: | chr5:57584777-57584613 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 123-273 |
| Cow position: | chr5:32088011-32088162 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 125-273 |
| Cow position: | chr5:6286596-6286745 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 155-273 |
| Cow position: | chr5:63987753-63987870 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 49 |
Show alignments to all cow chromosomes.