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Cow genome map

           
Conread name:
           
Lng1-LNG010013G12
        

               
Conread position:
               
1-443
               

               
Cow position:
               
chr1:57568550-57569011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 170
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr1:76544922-76544355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr1:25179411-25178841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr1:3385403-3384813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr1:48246446-48247050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr1:76621068-76620446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 534
               

               
Conread position:
               
1-640
               

               
Cow position:
               
chr1:6194848-6195521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 175
               

               
Conread position:
               
1-661
               

               
Cow position:
               
chr1:21999340-21998672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-696
               

               
Cow position:
               
chr1:69921821-69921099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-810
               

               
Cow position:
               
chr1:43985464-43984655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
841
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
1-825
               

               
Cow position:
               
chr1:5502585-5503435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
636
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
1-830
               

               
Cow position:
               
chr1:52358658-52357786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-831
               

               
Cow position:
               
chr1:72984117-72984947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
649
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-832
               

               
Cow position:
               
chr1:65386946-65387790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:8825669-8826530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
643
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:12061601-12060731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
880
               

               
Alignm identity:
               
656
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:25550575-25551439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:26518272-26517414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
656
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:28873694-28874542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:30534404-30533545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:33551540-33552404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
678
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:42737072-42737908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:49973574-49972694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
887
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:55777198-55778063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
655
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 169
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:56143718-56142869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
652
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:62244026-62243178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 171
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:62805563-62804700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:63605162-63604296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:68606927-68606073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
656
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:72186265-72185405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
653
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 164
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:93855133-93855989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:94660289-94661147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr1:102434424-102433565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
2-833
               

               
Cow position:
               
chr1:33712709-33713546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
649
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 174
               

               
Conread position:
               
3-754
               

               
Cow position:
               
chr1:22843257-22844035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 176
               

               
Conread position:
               
4-623
               

               
Cow position:
               
chr1:32662364-32662972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
49, 112
               

               
Conread position:
               
4-833
               

               
Cow position:
               
chr1:31417897-31417032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
880
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 169
               

               
Conread position:
               
5-558
               

               
Cow position:
               
chr1:18241894-18241322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 168
               

               
Conread position:
               
5-787
               

               
Cow position:
               
chr1:29034912-29035707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
815
               

               
Alignm identity:
               
589
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 69
               

               
Conread position:
               
5-816
               

               
Cow position:
               
chr1:72038933-72038108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
841
               

               
Alignm identity:
               
624
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 14
               

               
Conread position:
               
5-831
               

               
Cow position:
               
chr1:31365469-31364625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
638
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 164
               

               
Conread position:
               
5-833
               

               
Cow position:
               
chr1:91446093-91446918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
6-514
               

               
Cow position:
               
chr1:82923566-82923029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 168
               

               
Conread position:
               
6-527
               

               
Cow position:
               
chr1:67287446-67287987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
6-668
               

               
Cow position:
               
chr1:59209532-59208839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 171
               

               
Conread position:
               
6-680
               

               
Cow position:
               
chr1:60339921-60340616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
6-718
               

               
Cow position:
               
chr1:63502454-63503169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
6-732
               

               
Cow position:
               
chr1:89770096-89769334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 178
               

               
Conread position:
               
6-746
               

               
Cow position:
               
chr1:15026980-15027740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 171
               

               
Conread position:
               
6-791
               

               
Cow position:
               
chr1:18139831-18139043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 28
               

               
Conread position:
               
6-810
               

               
Cow position:
               
chr1:11860620-11859798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
602
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
6-810
               

               
Cow position:
               
chr1:23052395-23053197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
590
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
6-816
               

               
Cow position:
               
chr1:43570786-43569956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 31
               

               
Conread position:
               
6-816
               

               
Cow position:
               
chr1:79636345-79635530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
632
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 156
               

               
Conread position:
               
6-816
               

               
Cow position:
               
chr1:82653284-82654119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
843
               

               
Alignm identity:
               
606
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
6-816
               

               
Cow position:
               
chr1:91899623-91900484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
615
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 767
               

               
Conread position:
               
6-825
               

               
Cow position:
               
chr1:55156381-55155539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
614
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 168
               

               
Conread position:
               
6-825
               

               
Cow position:
               
chr1:86547520-86546670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
626
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 167
               

               
Conread position:
               
6-830
               

               
Cow position:
               
chr1:56164168-56165008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
624
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 152
               

               
Conread position:
               
6-830
               

               
Cow position:
               
chr1:99914042-99914901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
668
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 170
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr1:5355745-5356601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
626
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 170
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr1:9259115-9259958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
619
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 52
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr1:17012120-17011262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
581
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 138
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr1:29362916-29363768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
628
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 170
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr1:33851904-33852742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
632
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 170
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr1:40574832-40575673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
618
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 170
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr1:53199169-53200018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
626
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr1:57424222-57423359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
627
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 160
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr1:80358562-80357701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
636
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 170
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr1:82912524-82911681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
606
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
6-833
               

               
Cow position:
               
chr1:57662643-57663496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
604
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
6-833
               

               
Cow position:
               
chr1:88131395-88132251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
650
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 170
               

               
Conread position:
               
6-833
               

               
Cow position:
               
chr1:91598063-91597236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 314
               

               
Conread position:
               
6-833
               

               
Cow position:
               
chr1:91892497-91891644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
639
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 170
               

               
Conread position:
               
7-608
               

               
Cow position:
               
chr1:16217038-16216428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
7-620
               

               
Cow position:
               
chr1:58200881-58200250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
7-648
               

               
Cow position:
               
chr1:31397312-31397974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 169
               

               
Conread position:
               
7-831
               

               
Cow position:
               
chr1:21088033-21088905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
628
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
7-833
               

               
Cow position:
               
chr1:73070430-73069587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
649
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 51
               

               
Conread position:
               
8-646
               

               
Cow position:
               
chr1:22344708-22345347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 39
               

               
Conread position:
               
8-831
               

               
Cow position:
               
chr1:67834520-67833661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
624
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 142
               

               
Conread position:
               
8-831
               

               
Cow position:
               
chr1:85792302-85793154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
626
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 165
               

               
Conread position:
               
13-825
               

               
Cow position:
               
chr1:98659278-98658442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
616
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 24
               

               
Conread position:
               
16-833
               

               
Cow position:
               
chr1:22905395-22906225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
17-833
               

               
Cow position:
               
chr1:40512381-40511545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
611
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 6
               

               
Conread position:
               
18-833
               

               
Cow position:
               
chr1:79111121-79111950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 164
               

               
Conread position:
               
20-833
               

               
Cow position:
               
chr1:72081399-72082239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
630
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 156
               

               
Conread position:
               
23-825
               

               
Cow position:
               
chr1:31359072-31359870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
831
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
25-833
               

               
Cow position:
               
chr1:85779800-85778975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
630
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 151
               

               
Conread position:
               
27-655
               

               
Cow position:
               
chr1:59647948-59648600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
27-832
               

               
Cow position:
               
chr1:52938778-52939572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
30-833
               

               
Cow position:
               
chr1:86610789-86611606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 151
               

               
Conread position:
               
32-755
               

               
Cow position:
               
chr1:61309867-61310628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 141
               

               
Conread position:
               
40-831
               

               
Cow position:
               
chr1:20829563-20830368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
50-833
               

               
Cow position:
               
chr1:72944464-72945220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 13
               

               
Conread position:
               
56-495
               

               
Cow position:
               
chr1:38416561-38417005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 117
               

               
Conread position:
               
60-728
               

               
Cow position:
               
chr1:88269561-88268869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 116
               

               
Conread position:
               
71-569
               

               
Cow position:
               
chr1:30283013-30282490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 94
               

               
Conread position:
               
77-832
               

               
Cow position:
               
chr1:39540244-39539484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 92
               

               
Conread position:
               
78-833
               

               
Cow position:
               
chr1:32908517-32909301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 95
               

               
Conread position:
               
79-833
               

               
Cow position:
               
chr1:102781597-102780857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
80-732
               

               
Cow position:
               
chr1:67079632-67078962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 205
               

               
Conread position:
               
85-833
               

               
Cow position:
               
chr1:30063090-30063831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
85-833
               

               
Cow position:
               
chr1:67327205-67326458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 80
               

               
Conread position:
               
88-832
               

               
Cow position:
               
chr1:99019308-99018543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 85
               

               
Conread position:
               
89-831
               

               
Cow position:
               
chr1:57657593-57658369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 58
               

               
Conread position:
               
95-816
               

               
Cow position:
               
chr1:20081203-20080513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
126-821
               

               
Cow position:
               
chr1:57697414-57696701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
128-647
               

               
Cow position:
               
chr1:18273932-18274480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
128-727
               

               
Cow position:
               
chr1:31402714-31402101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
132-756
               

               
Cow position:
               
chr1:18027050-18026401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
147-833
               

               
Cow position:
               
chr1:69403774-69404479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
153-831
               

               
Cow position:
               
chr1:86595727-86595020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
168-670
               

               
Cow position:
               
chr1:74286006-74285477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
170-571
               

               
Cow position:
               
chr1:9381817-9381393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
179-833
               

               
Cow position:
               
chr1:56193374-56192688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 132
               

               
Conread position:
               
180-682
               

               
Cow position:
               
chr1:28278976-28279512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
5, 155
               

               
Conread position:
               
183-833
               

               
Cow position:
               
chr1:24652090-24652741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
186-826
               

               
Cow position:
               
chr1:42078448-42079093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
191-823
               

               
Cow position:
               
chr1:53364363-53365023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
211-831
               

               
Cow position:
               
chr1:55276200-55275557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 315
               

               
Conread position:
               
214-762
               

               
Cow position:
               
chr1:2543587-2543020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 318
               

               
Conread position:
               
230-831
               

               
Cow position:
               
chr1:20525328-20525952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
244-696
               

               
Cow position:
               
chr1:77115836-77115390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 210
               

               
Conread position:
               
248-831
               

               
Cow position:
               
chr1:55321202-55320599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 157
               

               
Conread position:
               
250-832
               

               
Cow position:
               
chr1:73198152-73197556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 420
               

               
Conread position:
               
258-832
               

               
Cow position:
               
chr1:30519471-30520070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 385
               

               
Conread position:
               
264-574
               

               
Cow position:
               
chr1:97496079-97495753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
268-822
               

               
Cow position:
               
chr1:57972815-57972250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 190
               

               
Conread position:
               
272-488
               

               
Cow position:
               
chr1:67315788-67315998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
273-815
               

               
Cow position:
               
chr1:101861166-101860625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
273-833
               

               
Cow position:
               
chr1:38419571-38420137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
291-833
               

               
Cow position:
               
chr1:3934347-3933782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 482
               

               
Conread position:
               
332-816
               

               
Cow position:
               
chr1:60933473-60932975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
95, 179
               

               
Conread position:
               
332-823
               

               
Cow position:
               
chr1:54394662-54394176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
332-833
               

               
Cow position:
               
chr1:34693656-34694158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 73
               

               
Conread position:
               
335-543
               

               
Cow position:
               
chr1:43636647-43636854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
97, 163
               

               
Conread position:
               
335-557
               

               
Cow position:
               
chr1:2413087-2412862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
335-833
               

               
Cow position:
               
chr1:34619728-34620212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
336-727
               

               
Cow position:
               
chr1:27541714-27542083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
384, 96
               

               
Conread position:
               
336-833
               

               
Cow position:
               
chr1:76703315-76702828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 166
               

               
Conread position:
               
337-743
               

               
Cow position:
               
chr1:84226778-84227183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 285
               

               
Conread position:
               
337-831
               

               
Cow position:
               
chr1:32566950-32566451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 415
               

               
Conread position:
               
338-832
               

               
Cow position:
               
chr1:70419407-70418909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
339-490
               

               
Cow position:
               
chr1:22455189-22455344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 69
               

               
Conread position:
               
341-775
               

               
Cow position:
               
chr1:22619663-22619228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 183
               

               
Conread position:
               
341-831
               

               
Cow position:
               
chr1:81777401-81777900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 216
               

               
Conread position:
               
341-833
               

               
Cow position:
               
chr1:79455979-79455478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 358
               

               
Conread position:
               
344-825
               

               
Cow position:
               
chr1:85823184-85823631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
347-822
               

               
Cow position:
               
chr1:44972300-44972773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 142
               

               
Conread position:
               
347-833
               

               
Cow position:
               
chr1:76750993-76750498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 153
               

               
Conread position:
               
348-831
               

               
Cow position:
               
chr1:39544774-39545260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 208
               

               
Conread position:
               
354-649
               

               
Cow position:
               
chr1:13877494-13877198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
359-822
               

               
Cow position:
               
chr1:68336985-68336515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
364-833
               

               
Cow position:
               
chr1:29039038-29039510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
393-833
               

               
Cow position:
               
chr1:58178075-58177652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
410-833
               

               
Cow position:
               
chr1:47162583-47162166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
415-831
               

               
Cow position:
               
chr1:40056157-40056577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 6
               

               
Conread position:
               
427-833
               

               
Cow position:
               
chr1:89481915-89482299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 13
               

               
Conread position:
               
430-831
               

               
Cow position:
               
chr1:33897325-33897733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
431-831
               

               
Cow position:
               
chr1:69767646-69768053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 353
               

               
Conread position:
               
432-831
               

               
Cow position:
               
chr1:89495149-89494747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
436-831
               

               
Cow position:
               
chr1:17940699-17940297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 6
               

               
Conread position:
               
455-831
               

               
Cow position:
               
chr1:81288245-81288608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
463-831
               

               
Cow position:
               
chr1:24443259-24442888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
472-825
               

               
Cow position:
               
chr1:4209315-4209675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 254
               

               
Conread position:
               
485-833
               

               
Cow position:
               
chr1:45031427-45031778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
495-833
               

               
Cow position:
               
chr1:81927499-81927181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
498-833
               

               
Cow position:
               
chr1:82923019-82922683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 197
               

               
Conread position:
               
518-833
               

               
Cow position:
               
chr1:29413010-29412706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 181
               

               
Conread position:
               
538-826
               

               
Cow position:
               
chr1:59934561-59934863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
539-826
               

               
Cow position:
               
chr1:46836796-46837095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
540-832
               

               
Cow position:
               
chr1:51671837-51672129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
543-831
               

               
Cow position:
               
chr1:82477156-82477449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 184
               

               
Conread position:
               
561-833
               

               
Cow position:
               
chr1:3384743-3384482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 39
               

               
Conread position:
               
561-833
               

               
Cow position:
               
chr1:38417338-38417609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 147
               

               
Conread position:
               
567-833
               

               
Cow position:
               
chr1:18241011-18240750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 137
               

               
Conread position:
               
572-825
               

               
Cow position:
               
chr1:18193106-18193364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
573-833
               

               
Cow position:
               
chr1:78923441-78923702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
113, 84
               

               
Conread position:
               
581-831
               

               
Cow position:
               
chr1:77922926-77923181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 146
               

               
Conread position:
               
593-833
               

               
Cow position:
               
chr1:76620230-76620000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
597-827
               

               
Cow position:
               
chr1:7141403-7141176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 96
               

               
Conread position:
               
600-832
               

               
Cow position:
               
chr1:93235939-93236171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
174, 93
               

               
Conread position:
               
606-833
               

               
Cow position:
               
chr1:77462902-77463132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 147
               

               
Conread position:
               
623-831
               

               
Cow position:
               
chr1:80445412-80445624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 103
               

               
Conread position:
               
627-816
               

               
Cow position:
               
chr1:81862716-81862524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
627-825
               

               
Cow position:
               
chr1:26584367-26584567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
634-833
               

               
Cow position:
               
chr1:87969598-87969793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
141, 22
               

               
Conread position:
               
646-831
               

               
Cow position:
               
chr1:67002442-67002631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
657-831
               

               
Cow position:
               
chr1:30074170-30074344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
659-833
               

               
Cow position:
               
chr1:74285376-74285202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
82, 105
               
Show alignments to all cow chromosomes.