Cow genome map
| Conread name: | Lng1-LNG010013G12 |
| Conread position: | 1-419 |
| Cow position: | chr12:36427801-36428222 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 1-419 |
| Cow position: | chr12:36479739-36480157 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 107 |
| Conread position: | 1-481 |
| Cow position: | chr12:35314089-35313611 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 1-529 |
| Cow position: | chr12:21198527-21199075 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 164 |
| Conread position: | 1-634 |
| Cow position: | chr12:36449144-36449787 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 1-787 |
| Cow position: | chr12:25262905-25262092 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 175 |
| Conread position: | 1-821 |
| Cow position: | chr12:25100493-25099663 (view UCSC Genome Browser custom track) |
| Alignm length: | 844 |
| Alignm identity: | 655 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 1-831 |
| Cow position: | chr12:20997533-20996664 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 620 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 174 |
| Conread position: | 1-833 |
| Cow position: | chr12:600794-599947 (view UCSC Genome Browser custom track) |
| Alignm length: | 865 |
| Alignm identity: | 628 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 177 |
| Conread position: | 1-833 |
| Cow position: | chr12:1403056-1403926 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 648 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 175 |
| Conread position: | 1-833 |
| Cow position: | chr12:6406082-6405212 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 663 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 174 |
| Conread position: | 1-833 |
| Cow position: | chr12:8677538-8676675 (view UCSC Genome Browser custom track) |
| Alignm length: | 873 |
| Alignm identity: | 635 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 175 |
| Conread position: | 1-833 |
| Cow position: | chr12:11098799-11099650 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 653 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 1-833 |
| Cow position: | chr12:22205179-22204288 (view UCSC Genome Browser custom track) |
| Alignm length: | 899 |
| Alignm identity: | 647 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 127 |
| Conread position: | 1-833 |
| Cow position: | chr12:27855398-27854539 (view UCSC Genome Browser custom track) |
| Alignm length: | 864 |
| Alignm identity: | 643 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 124 |
| Conread position: | 2-634 |
| Cow position: | chr12:36367399-36368052 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 166 |
| Conread position: | 5-575 |
| Cow position: | chr12:14662064-14661464 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 455 |
| Conread position: | 6-831 |
| Cow position: | chr12:3361493-3362363 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 632 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 170 |
| Conread position: | 6-831 |
| Cow position: | chr12:21209228-21210086 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 611 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 12 |
| Conread position: | 6-831 |
| Cow position: | chr12:32654110-32654978 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 639 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 170 |
| Conread position: | 6-832 |
| Cow position: | chr12:17979303-17980131 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 591 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 173 |
| Conread position: | 8-833 |
| Cow position: | chr12:8139545-8138716 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 8-833 |
| Cow position: | chr12:21942306-21943160 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 635 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 22-830 |
| Cow position: | chr12:7864281-7863454 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 76-749 |
| Cow position: | chr12:32063760-32064432 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 88-526 |
| Cow position: | chr12:41380332-41380791 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 85 |
| Conread position: | 108-833 |
| Cow position: | chr12:42858864-42858112 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 65 |
| Conread position: | 119-833 |
| Cow position: | chr12:27932222-27931485 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 54 |
| Conread position: | 175-474 |
| Cow position: | chr12:11580488-11580801 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 182-753 |
| Cow position: | chr12:21127905-21128470 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 197-813 |
| Cow position: | chr12:21387483-21386838 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 306 |
| Conread position: | 199-634 |
| Cow position: | chr12:36337552-36337998 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 220 |
| Conread position: | 243-635 |
| Cow position: | chr12:12292784-12293180 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 276 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 35, 195 |
| Conread position: | 257-542 |
| Cow position: | chr12:349191-349488 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 25 |
| Conread position: | 279-764 |
| Cow position: | chr12:28004786-28005258 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 308-599 |
| Cow position: | chr12:32678046-32677761 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 11, 160 |
| Conread position: | 335-649 |
| Cow position: | chr12:48211602-48211305 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 92, 112 |
| Conread position: | 335-833 |
| Cow position: | chr12:35345475-35345961 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 156 |
| Conread position: | 342-831 |
| Cow position: | chr12:23141271-23140764 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 422 |
| Conread position: | 343-816 |
| Cow position: | chr12:18464894-18465332 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 38 |
| Conread position: | 345-753 |
| Cow position: | chr12:485809-486213 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 82, 5 |
| Conread position: | 366-822 |
| Cow position: | chr12:37559956-37560425 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 369 |
| Conread position: | 427-833 |
| Cow position: | chr12:22500214-22499823 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 241, 43 |
| Conread position: | 433-811 |
| Cow position: | chr12:24977803-24977415 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 271 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 31, 214 |
| Conread position: | 433-833 |
| Cow position: | chr12:48471859-48471460 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 32 |
| Conread position: | 445-809 |
| Cow position: | chr12:33119182-33119573 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 279 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 77, 164 |
| Conread position: | 456-820 |
| Cow position: | chr12:1776925-1776546 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 104 |
| Conread position: | 490-831 |
| Cow position: | chr12:31202414-31202066 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 236 |
| Conread position: | 514-825 |
| Cow position: | chr12:1888461-1888143 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 267 |
| Conread position: | 517-833 |
| Cow position: | chr12:20604241-20604560 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 117 |
| Conread position: | 523-826 |
| Cow position: | chr12:20843725-20844021 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 133 |
| Conread position: | 562-833 |
| Cow position: | chr12:349552-349824 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 143, 84 |
| Conread position: | 578-831 |
| Cow position: | chr12:14661184-14660928 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 125, 171 |
| Conread position: | 587-816 |
| Cow position: | chr12:19870090-19870313 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 608-831 |
| Cow position: | chr12:21429203-21429430 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 49 |
| Conread position: | 630-833 |
| Cow position: | chr12:20430536-20430744 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 68, 99 |
| Conread position: | 631-833 |
| Cow position: | chr12:32677755-32677559 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 147, 53 |
| Conread position: | 634-825 |
| Cow position: | chr12:6861270-6861454 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 115 |
| Conread position: | 649-831 |
| Cow position: | chr12:24433848-24433662 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 34, 105 |
Show alignments to all cow chromosomes.