Cow genome map


           Conread name:
           Lng1-LNG010013G12
        

               Conread position:
               1-635
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 175
               

               Conread position:
               1-787
               

               Cow position:
               
               

               Alignm length:
               837
               

               Alignm identity:
               618
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 171
               

               Conread position:
               1-831
               

               Cow position:
               
               

               Alignm length:
               861
               

               Alignm identity:
               635
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               1-833
               

               Cow position:
               
               

               Alignm length:
               871
               

               Alignm identity:
               664
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               1-833
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               654
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               1-833
               

               Cow position:
               
               

               Alignm length:
               869
               

               Alignm identity:
               669
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               1-833
               

               Cow position:
               
               

               Alignm length:
               871
               

               Alignm identity:
               660
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 97
               

               Conread position:
               5-590
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 54
               

               Conread position:
               5-831
               

               Cow position:
               
               

               Alignm length:
               855
               

               Alignm identity:
               639
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 168
               

               Conread position:
               5-831
               

               Cow position:
               
               

               Alignm length:
               868
               

               Alignm identity:
               636
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               6-665
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 57
               

               Conread position:
               6-718
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 166
               

               Conread position:
               6-727
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               552
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 157
               

               Conread position:
               6-816
               

               Cow position:
               
               

               Alignm length:
               854
               

               Alignm identity:
               620
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 170
               

               Conread position:
               6-823
               

               Cow position:
               
               

               Alignm length:
               851
               

               Alignm identity:
               645
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 82
               

               Conread position:
               6-825
               

               Cow position:
               
               

               Alignm length:
               854
               

               Alignm identity:
               602
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 52
               

               Conread position:
               6-831
               

               Cow position:
               
               

               Alignm length:
               866
               

               Alignm identity:
               624
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 168
               

               Conread position:
               6-831
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               626
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 174
               

               Conread position:
               6-831
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               660
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 170
               

               Conread position:
               6-831
               

               Cow position:
               
               

               Alignm length:
               865
               

               Alignm identity:
               640
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 170
               

               Conread position:
               6-831
               

               Cow position:
               
               

               Alignm length:
               859
               

               Alignm identity:
               612
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 114
               

               Conread position:
               6-833
               

               Cow position:
               
               

               Alignm length:
               862
               

               Alignm identity:
               626
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 105
               

               Conread position:
               7-833
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               633
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 121
               

               Conread position:
               9-677
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 49
               

               Conread position:
               11-821
               

               Cow position:
               
               

               Alignm length:
               838
               

               Alignm identity:
               612
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 202
               

               Conread position:
               14-519
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 159
               

               Conread position:
               17-755
               

               Cow position:
               
               

               Alignm length:
               770
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 161
               

               Conread position:
               17-795
               

               Cow position:
               
               

               Alignm length:
               803
               

               Alignm identity:
               592
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               37-758
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               56-526
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 117
               

               Conread position:
               56-833
               

               Cow position:
               
               

               Alignm length:
               821
               

               Alignm identity:
               601
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 53
               

               Conread position:
               62-833
               

               Cow position:
               
               

               Alignm length:
               793
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               74-458
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               74-590
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 52
               

               Conread position:
               77-833
               

               Cow position:
               
               

               Alignm length:
               793
               

               Alignm identity:
               598
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 96
               

               Conread position:
               79-441
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 94
               

               Conread position:
               81-715
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 76
               

               Conread position:
               101-555
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 61
               

               Conread position:
               108-817
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 57
               

               Conread position:
               120-528
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 53
               

               Conread position:
               121-825
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 22
               

               Conread position:
               135-560
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               143-833
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               552
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               219-833
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 19
               

               Conread position:
               220-833
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 397
               

               Conread position:
               226-822
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 66
               

               Conread position:
               228-816
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 165
               

               Conread position:
               231-833
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 66
               

               Conread position:
               238-825
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               243-617
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 19
               

               Conread position:
               243-831
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               243-833
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 284
               

               Conread position:
               272-833
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               376
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 168
               

               Conread position:
               319-783
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 13
               

               Conread position:
               335-821
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 141
               

               Conread position:
               336-822
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               314
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               108, 16
               

               Conread position:
               337-755
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               284
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               292, 106
               

               Conread position:
               341-833
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 358
               

               Conread position:
               342-551
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               85, 7
               

               Conread position:
               342-831
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 396
               

               Conread position:
               342-831
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 127
               

               Conread position:
               343-810
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 137
               

               Conread position:
               349-718
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               103, 119
               

               Conread position:
               357-827
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               74, 99
               

               Conread position:
               432-833
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 58
               

               Conread position:
               433-825
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 100
               

               Conread position:
               434-826
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               108, 95
               

               Conread position:
               434-833
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 8
               

               Conread position:
               445-833
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               445-833
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 110
               

               Conread position:
               482-833
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 102
               

               Conread position:
               491-831
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 238
               

               Conread position:
               491-832
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               502-831
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 224
               

               Conread position:
               515-833
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 128
               

               Conread position:
               524-825
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               35, 77
               

               Conread position:
               549-825
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 6
               

               Conread position:
               558-831
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               150, 116
               

               Conread position:
               560-823
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               561-833
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 98
               

               Conread position:
               567-833
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 126
               

               Conread position:
               583-831
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               113, 143
               

               Conread position:
               610-830
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               86, 116
               

               Conread position:
               650-833
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 36
               
Show alignments to all cow chromosomes.