Cow genome map
Conread name: | Lng1-LNG010013G12 |
Conread position: | 1-635 |
Cow position: | chr13:32737481-32736821 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 175 |
Conread position: | 1-787 |
Cow position: | chr13:30303626-30304460 (view UCSC Genome Browser custom track) |
Alignm length: | 837 |
Alignm identity: | 618 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 171 |
Conread position: | 1-831 |
Cow position: | chr13:15520164-15519323 (view UCSC Genome Browser custom track) |
Alignm length: | 861 |
Alignm identity: | 635 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 175 |
Conread position: | 1-833 |
Cow position: | chr13:3653977-3653109 (view UCSC Genome Browser custom track) |
Alignm length: | 871 |
Alignm identity: | 664 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 175 |
Conread position: | 1-833 |
Cow position: | chr13:13900212-13901072 (view UCSC Genome Browser custom track) |
Alignm length: | 870 |
Alignm identity: | 654 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 175 |
Conread position: | 1-833 |
Cow position: | chr13:15924036-15923175 (view UCSC Genome Browser custom track) |
Alignm length: | 869 |
Alignm identity: | 669 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 144 |
Conread position: | 1-833 |
Cow position: | chr13:31611960-31611104 (view UCSC Genome Browser custom track) |
Alignm length: | 871 |
Alignm identity: | 660 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 97 |
Conread position: | 5-590 |
Cow position: | chr13:60700310-60699707 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 54 |
Conread position: | 5-831 |
Cow position: | chr13:6667768-6666931 (view UCSC Genome Browser custom track) |
Alignm length: | 855 |
Alignm identity: | 639 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 317, 168 |
Conread position: | 5-831 |
Cow position: | chr13:32985001-32984142 (view UCSC Genome Browser custom track) |
Alignm length: | 868 |
Alignm identity: | 636 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 13 |
Conread position: | 6-665 |
Cow position: | chr13:16255026-16254351 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 527 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 57 |
Conread position: | 6-718 |
Cow position: | chr13:1592804-1592071 (view UCSC Genome Browser custom track) |
Alignm length: | 743 |
Alignm identity: | 555 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 166 |
Conread position: | 6-727 |
Cow position: | chr13:60466679-60467427 (view UCSC Genome Browser custom track) |
Alignm length: | 754 |
Alignm identity: | 552 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 157 |
Conread position: | 6-816 |
Cow position: | chr13:21839852-21839006 (view UCSC Genome Browser custom track) |
Alignm length: | 854 |
Alignm identity: | 620 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-823 |
Cow position: | chr13:34325209-34324385 (view UCSC Genome Browser custom track) |
Alignm length: | 851 |
Alignm identity: | 645 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 82 |
Conread position: | 6-825 |
Cow position: | chr13:50109806-50110649 (view UCSC Genome Browser custom track) |
Alignm length: | 854 |
Alignm identity: | 602 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 52 |
Conread position: | 6-831 |
Cow position: | chr13:2388465-2387603 (view UCSC Genome Browser custom track) |
Alignm length: | 866 |
Alignm identity: | 624 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 168 |
Conread position: | 6-831 |
Cow position: | chr13:17308816-17309666 (view UCSC Genome Browser custom track) |
Alignm length: | 867 |
Alignm identity: | 626 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 174 |
Conread position: | 6-831 |
Cow position: | chr13:32545729-32546594 (view UCSC Genome Browser custom track) |
Alignm length: | 875 |
Alignm identity: | 660 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 170 |
Conread position: | 6-831 |
Cow position: | chr13:47229655-47228795 (view UCSC Genome Browser custom track) |
Alignm length: | 865 |
Alignm identity: | 640 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-831 |
Cow position: | chr13:49974030-49974868 (view UCSC Genome Browser custom track) |
Alignm length: | 859 |
Alignm identity: | 612 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 114 |
Conread position: | 6-833 |
Cow position: | chr13:15450763-15449936 (view UCSC Genome Browser custom track) |
Alignm length: | 862 |
Alignm identity: | 626 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 105 |
Conread position: | 7-833 |
Cow position: | chr13:4484148-4484997 (view UCSC Genome Browser custom track) |
Alignm length: | 867 |
Alignm identity: | 633 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 121 |
Conread position: | 9-677 |
Cow position: | chr13:42218564-42217866 (view UCSC Genome Browser custom track) |
Alignm length: | 707 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 49 |
Conread position: | 11-821 |
Cow position: | chr13:34937834-34938636 (view UCSC Genome Browser custom track) |
Alignm length: | 838 |
Alignm identity: | 612 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 202 |
Conread position: | 14-519 |
Cow position: | chr13:20541679-20541167 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 159 |
Conread position: | 17-755 |
Cow position: | chr13:30277980-30278738 (view UCSC Genome Browser custom track) |
Alignm length: | 770 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 161 |
Conread position: | 17-795 |
Cow position: | chr13:43982724-43981943 (view UCSC Genome Browser custom track) |
Alignm length: | 803 |
Alignm identity: | 592 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 15 |
Conread position: | 37-758 |
Cow position: | chr13:31556347-31555608 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 67 |
Conread position: | 56-526 |
Cow position: | chr13:3056735-3056244 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 117 |
Conread position: | 56-833 |
Cow position: | chr13:5625592-5624790 (view UCSC Genome Browser custom track) |
Alignm length: | 821 |
Alignm identity: | 601 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 53 |
Conread position: | 62-833 |
Cow position: | chr13:5628399-5627642 (view UCSC Genome Browser custom track) |
Alignm length: | 793 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 44 |
Conread position: | 74-458 |
Cow position: | chr13:19440988-19441390 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 283 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 143, 44 |
Conread position: | 74-590 |
Cow position: | chr13:26844466-26844968 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 52 |
Conread position: | 77-833 |
Cow position: | chr13:4941811-4942589 (view UCSC Genome Browser custom track) |
Alignm length: | 793 |
Alignm identity: | 598 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 96 |
Conread position: | 79-441 |
Cow position: | chr13:33335886-33335508 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 94 |
Conread position: | 81-715 |
Cow position: | chr13:6758408-6759075 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 76 |
Conread position: | 101-555 |
Cow position: | chr13:34766000-34765538 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 61 |
Conread position: | 108-817 |
Cow position: | chr13:9045238-9045953 (view UCSC Genome Browser custom track) |
Alignm length: | 743 |
Alignm identity: | 545 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 57 |
Conread position: | 120-528 |
Cow position: | chr13:28670795-28670371 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 53 |
Conread position: | 121-825 |
Cow position: | chr13:31730407-31729697 (view UCSC Genome Browser custom track) |
Alignm length: | 728 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 22 |
Conread position: | 135-560 |
Cow position: | chr13:52646396-52645950 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 38 |
Conread position: | 143-833 |
Cow position: | chr13:34041846-34041130 (view UCSC Genome Browser custom track) |
Alignm length: | 728 |
Alignm identity: | 552 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 30 |
Conread position: | 219-833 |
Cow position: | chr13:17331191-17330580 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 19 |
Conread position: | 220-833 |
Cow position: | chr13:35757844-35758489 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 397 |
Conread position: | 226-822 |
Cow position: | chr13:34049316-34049930 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 66 |
Conread position: | 228-816 |
Cow position: | chr13:11798131-11797527 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 165 |
Conread position: | 231-833 |
Cow position: | chr13:15543124-15543744 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 66 |
Conread position: | 238-825 |
Cow position: | chr13:8797197-8796610 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 27 |
Conread position: | 243-617 |
Cow position: | chr13:34154162-34153772 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 19 |
Conread position: | 243-831 |
Cow position: | chr13:21696846-21697466 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 243-833 |
Cow position: | chr13:30654786-30654190 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 284 |
Conread position: | 272-833 |
Cow position: | chr13:28347628-28347053 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 376 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 15, 168 |
Conread position: | 319-783 |
Cow position: | chr13:42202554-42202086 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 13 |
Conread position: | 335-821 |
Cow position: | chr13:43590030-43590516 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 141 |
Conread position: | 336-822 |
Cow position: | chr13:34020006-34019543 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 314 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 108, 16 |
Conread position: | 337-755 |
Cow position: | chr13:57823969-57823551 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 284 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 292, 106 |
Conread position: | 341-833 |
Cow position: | chr13:14402393-14401902 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 358 |
Conread position: | 342-551 |
Cow position: | chr13:47861533-47861744 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 85, 7 |
Conread position: | 342-831 |
Cow position: | chr13:13325626-13326131 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 396 |
Conread position: | 342-831 |
Cow position: | chr13:31733184-31732691 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 127 |
Conread position: | 343-810 |
Cow position: | chr13:44653109-44652647 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 137 |
Conread position: | 349-718 |
Cow position: | chr13:6526431-6526807 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 242 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 103, 119 |
Conread position: | 357-827 |
Cow position: | chr13:30276589-30276121 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 315 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 74, 99 |
Conread position: | 432-833 |
Cow position: | chr13:23002208-23001808 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 58 |
Conread position: | 433-825 |
Cow position: | chr13:678549-678947 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 100 |
Conread position: | 434-826 |
Cow position: | chr13:37554513-37554889 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 254 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 108, 95 |
Conread position: | 434-833 |
Cow position: | chr13:30239125-30239519 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 254, 8 |
Conread position: | 445-833 |
Cow position: | chr13:11794232-11793876 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 66 |
Conread position: | 445-833 |
Cow position: | chr13:48358455-48358838 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 110 |
Conread position: | 482-833 |
Cow position: | chr13:34030469-34030811 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 102 |
Conread position: | 491-831 |
Cow position: | chr13:17998414-17998761 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 238 |
Conread position: | 491-832 |
Cow position: | chr13:61052164-61051835 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 226 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 34, 23 |
Conread position: | 502-831 |
Cow position: | chr13:28860031-28860367 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 224 |
Conread position: | 515-833 |
Cow position: | chr13:32924245-32923928 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 128 |
Conread position: | 524-825 |
Cow position: | chr13:11738811-11739116 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 215 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 35, 77 |
Conread position: | 549-825 |
Cow position: | chr13:3482903-3482621 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 196 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 29, 6 |
Conread position: | 558-831 |
Cow position: | chr13:31507842-31508112 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 207 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 150, 116 |
Conread position: | 560-823 |
Cow position: | chr13:28670287-28670039 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 198 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 28, 77 |
Conread position: | 561-833 |
Cow position: | chr13:34342835-34343110 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 98 |
Conread position: | 567-833 |
Cow position: | chr13:34909087-34908831 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 126 |
Conread position: | 583-831 |
Cow position: | chr13:6358074-6358326 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 182 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 113, 143 |
Conread position: | 610-830 |
Cow position: | chr13:5501021-5500797 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 168 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 86, 116 |
Conread position: | 650-833 |
Cow position: | chr13:42090670-42090486 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 141 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 58, 36 |
Show alignments to all cow chromosomes.