Cow genome map

Conread name: Lng1-LNG010013G12

Conread position: 1-509
Cow position:
Alignm length: 535
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-570
Cow position:
Alignm length: 598
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 36

Conread position: 1-575
Cow position:
Alignm length: 606
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-718
Cow position:
Alignm length: 747
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 171

Conread position: 1-764
Cow position:
Alignm length: 803
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-816
Cow position:
Alignm length: 841
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 161

Conread position: 1-831
Cow position:
Alignm length: 861
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 70

Conread position: 1-833
Cow position:
Alignm length: 865
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 869
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 87

Conread position: 1-833
Cow position:
Alignm length: 883
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 895
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 113

Conread position: 1-833
Cow position:
Alignm length: 875
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 168

Conread position: 1-833
Cow position:
Alignm length: 869
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 870
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 873
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 175

Conread position: 1-833
Cow position:
Alignm length: 876
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 890
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 858
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 109

Conread position: 1-833
Cow position:
Alignm length: 867
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 168

Conread position: 2-833
Cow position:
Alignm length: 861
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 5-822
Cow position:
Alignm length: 850
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 171

Conread position: 5-833
Cow position:
Alignm length: 864
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 6-475
Cow position:
Alignm length: 497
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 133

Conread position: 6-570
Cow position:
Alignm length: 593
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 170

Conread position: 6-571
Cow position:
Alignm length: 594
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-571
Cow position:
Alignm length: 589
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 53

Conread position: 6-636
Cow position:
Alignm length: 655
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 111

Conread position: 6-720
Cow position:
Alignm length: 747
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 170

Conread position: 6-801
Cow position:
Alignm length: 834
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 44

Conread position: 6-813
Cow position:
Alignm length: 841
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 167

Conread position: 6-825
Cow position:
Alignm length: 864
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 170

Conread position: 6-827
Cow position:
Alignm length: 860
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 51

Conread position: 6-831
Cow position:
Alignm length: 878
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 178

Conread position: 6-831
Cow position:
Alignm length: 859
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position:
Alignm length: 871
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position:
Alignm length: 870
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-833
Cow position:
Alignm length: 856
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 102

Conread position: 6-833
Cow position:
Alignm length: 888
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 103

Conread position: 6-833
Cow position:
Alignm length: 855
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 115

Conread position: 6-833
Cow position:
Alignm length: 858
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 31

Conread position: 8-825
Cow position:
Alignm length: 845
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 164

Conread position: 9-791
Cow position:
Alignm length: 818
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 11-514
Cow position:
Alignm length: 521
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 109

Conread position: 11-833
Cow position:
Alignm length: 833
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 164

Conread position: 14-764
Cow position:
Alignm length: 801
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 159

Conread position: 17-816
Cow position:
Alignm length: 834
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 47

Conread position: 17-833
Cow position:
Alignm length: 849
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 272

Conread position: 28-826
Cow position:
Alignm length: 822
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 49

Conread position: 32-689
Cow position:
Alignm length: 689
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 122

Conread position: 37-833
Cow position:
Alignm length: 821
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 139

Conread position: 49-645
Cow position:
Alignm length: 626
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 68

Conread position: 50-821
Cow position:
Alignm length: 815
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 123

Conread position: 74-833
Cow position:
Alignm length: 784
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 99

Conread position: 76-833
Cow position:
Alignm length: 770
Alignm identity: 480
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 20

Conread position: 77-764
Cow position:
Alignm length: 728
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 96

Conread position: 79-833
Cow position:
Alignm length: 795
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 94

Conread position: 81-833
Cow position:
Alignm length: 777
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 26

Conread position: 86-597
Cow position:
Alignm length: 531
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 87

Conread position: 97-670
Cow position:
Alignm length: 604
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 36

Conread position: 120-831
Cow position:
Alignm length: 763
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 53

Conread position: 134-833
Cow position:
Alignm length: 739
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 40

Conread position: 142-489
Cow position:
Alignm length: 372
Alignm identity: 263
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 84, 11

Conread position: 146-641
Cow position:
Alignm length: 509
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 27

Conread position: 147-831
Cow position:
Alignm length: 721
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 27

Conread position: 152-825
Cow position:
Alignm length: 705
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 13

Conread position: 159-816
Cow position:
Alignm length: 700
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 14

Conread position: 169-833
Cow position:
Alignm length: 708
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 132

Conread position: 174-832
Cow position:
Alignm length: 703
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 56

Conread position: 181-483
Cow position:
Alignm length: 327
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 35, 0

Conread position: 201-833
Cow position:
Alignm length: 658
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 165

Conread position: 218-481
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 129, 91

Conread position: 230-832
Cow position:
Alignm length: 633
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 324

Conread position: 246-816
Cow position:
Alignm length: 608
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 43

Conread position: 270-831
Cow position:
Alignm length: 580
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 60

Conread position: 270-833
Cow position:
Alignm length: 591
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 32

Conread position: 301-833
Cow position:
Alignm length: 558
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 337-825
Cow position:
Alignm length: 495
Alignm identity: 318
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 98, 83

Conread position: 342-821
Cow position:
Alignm length: 493
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 51

Conread position: 342-831
Cow position:
Alignm length: 502
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 387

Conread position: 342-831
Cow position:
Alignm length: 512
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 77

Conread position: 343-821
Cow position:
Alignm length: 490
Alignm identity: 313
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 84, 170

Conread position: 345-817
Cow position:
Alignm length: 479
Alignm identity: 303
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 96, 24

Conread position: 345-832
Cow position:
Alignm length: 496
Alignm identity: 309
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 182

Conread position: 346-832
Cow position:
Alignm length: 503
Alignm identity: 336
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 84, 144

Conread position: 361-825
Cow position:
Alignm length: 474
Alignm identity: 306
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 66, 117

Conread position: 374-810
Cow position:
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 139

Conread position: 384-833
Cow position:
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 104

Conread position: 396-832
Cow position:
Alignm length: 446
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 359

Conread position: 427-829
Cow position:
Alignm length: 408
Alignm identity: 281
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 123, 13

Conread position: 431-831
Cow position:
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 169

Conread position: 432-833
Cow position:
Alignm length: 407
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 59

Conread position: 441-833
Cow position:
Alignm length: 407
Alignm identity: 241
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 17, 24

Conread position: 443-832
Cow position:
Alignm length: 397
Alignm identity: 252
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 128

Conread position: 445-831
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 22

Conread position: 449-825
Cow position:
Alignm length: 386
Alignm identity: 247
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 124, 90

Conread position: 481-833
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 40

Conread position: 485-833
Cow position:
Alignm length: 358
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 232

Conread position: 485-833
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 118

Conread position: 501-831
Cow position:
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 195

Conread position: 510-832
Cow position:
Alignm length: 330
Alignm identity: 210
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 45

Conread position: 525-832
Cow position:
Alignm length: 314
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 161, 37

Conread position: 538-813
Cow position:
Alignm length: 280
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 95

Conread position: 539-833
Cow position:
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 75

Conread position: 540-829
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 22, 100

Conread position: 550-831
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 143, 64

Conread position: 553-822
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 100

Conread position: 559-821
Cow position:
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 164

Conread position: 561-823
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 156, 48

Conread position: 561-832
Cow position:
Alignm length: 275
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 50

Conread position: 562-831
Cow position:
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 162

Conread position: 562-833
Cow position:
Alignm length: 273
Alignm identity: 204
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 172, 88

Conread position: 572-833
Cow position:
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 171

Conread position: 575-833
Cow position:
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 118

Conread position: 576-818
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 117

Conread position: 612-825
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 24

Conread position: 612-825
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 24

Conread position: 633-831
Cow position:
Alignm length: 207
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 84, 136

Conread position: 663-829
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 82

Show alignments to all cow chromosomes.