Cow genome map
Conread name: | Lng1-LNG010013G12 |
Conread position: | 1-512 |
Cow position: | chr17:3642380-3641850 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 58 |
Conread position: | 1-640 |
Cow position: | chr17:1880551-1881216 (view UCSC Genome Browser custom track) |
Alignm length: | 672 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 100 |
Conread position: | 1-654 |
Cow position: | chr17:14894609-14895300 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 167 |
Conread position: | 1-764 |
Cow position: | chr17:16857070-16856268 (view UCSC Genome Browser custom track) |
Alignm length: | 806 |
Alignm identity: | 602 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 175 |
Conread position: | 1-816 |
Cow position: | chr17:19268382-19267535 (view UCSC Genome Browser custom track) |
Alignm length: | 854 |
Alignm identity: | 651 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 176 |
Conread position: | 1-825 |
Cow position: | chr17:2580071-2580923 (view UCSC Genome Browser custom track) |
Alignm length: | 866 |
Alignm identity: | 639 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 161 |
Conread position: | 1-825 |
Cow position: | chr17:40805265-40806110 (view UCSC Genome Browser custom track) |
Alignm length: | 861 |
Alignm identity: | 652 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 117 |
Conread position: | 1-831 |
Cow position: | chr17:250616-251444 (view UCSC Genome Browser custom track) |
Alignm length: | 861 |
Alignm identity: | 618 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 81 |
Conread position: | 1-831 |
Cow position: | chr17:5227071-5227930 (view UCSC Genome Browser custom track) |
Alignm length: | 872 |
Alignm identity: | 619 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 112 |
Conread position: | 1-833 |
Cow position: | chr17:6069005-6069859 (view UCSC Genome Browser custom track) |
Alignm length: | 870 |
Alignm identity: | 657 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 164 |
Conread position: | 1-833 |
Cow position: | chr17:6260298-6261170 (view UCSC Genome Browser custom track) |
Alignm length: | 879 |
Alignm identity: | 668 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 673 |
Conread position: | 1-833 |
Cow position: | chr17:20081408-20080572 (view UCSC Genome Browser custom track) |
Alignm length: | 857 |
Alignm identity: | 644 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 64 |
Conread position: | 1-833 |
Cow position: | chr17:24029554-24028691 (view UCSC Genome Browser custom track) |
Alignm length: | 872 |
Alignm identity: | 674 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 173 |
Conread position: | 2-708 |
Cow position: | chr17:22132686-22133380 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 553 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 42 |
Conread position: | 2-833 |
Cow position: | chr17:20087292-20086460 (view UCSC Genome Browser custom track) |
Alignm length: | 867 |
Alignm identity: | 626 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 121 |
Conread position: | 4-833 |
Cow position: | chr17:11087270-11086414 (view UCSC Genome Browser custom track) |
Alignm length: | 869 |
Alignm identity: | 665 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 13 |
Conread position: | 5-831 |
Cow position: | chr17:2247615-2246774 (view UCSC Genome Browser custom track) |
Alignm length: | 867 |
Alignm identity: | 608 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 14 |
Conread position: | 5-833 |
Cow position: | chr17:6000991-6000182 (view UCSC Genome Browser custom track) |
Alignm length: | 856 |
Alignm identity: | 591 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 101 |
Conread position: | 6-604 |
Cow position: | chr17:20488401-20489020 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 76 |
Conread position: | 6-764 |
Cow position: | chr17:15324282-15325084 (view UCSC Genome Browser custom track) |
Alignm length: | 806 |
Alignm identity: | 610 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 170 |
Conread position: | 6-816 |
Cow position: | chr17:31767585-31766744 (view UCSC Genome Browser custom track) |
Alignm length: | 845 |
Alignm identity: | 618 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 167 |
Conread position: | 6-820 |
Cow position: | chr17:2262557-2263404 (view UCSC Genome Browser custom track) |
Alignm length: | 856 |
Alignm identity: | 586 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-820 |
Cow position: | chr17:43988954-43989800 (view UCSC Genome Browser custom track) |
Alignm length: | 851 |
Alignm identity: | 614 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-824 |
Cow position: | chr17:20811435-20810618 (view UCSC Genome Browser custom track) |
Alignm length: | 852 |
Alignm identity: | 536 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 40, 174 |
Conread position: | 6-825 |
Cow position: | chr17:15436245-15437085 (view UCSC Genome Browser custom track) |
Alignm length: | 853 |
Alignm identity: | 629 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-830 |
Cow position: | chr17:6120165-6121016 (view UCSC Genome Browser custom track) |
Alignm length: | 857 |
Alignm identity: | 630 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-831 |
Cow position: | chr17:4060559-4061411 (view UCSC Genome Browser custom track) |
Alignm length: | 871 |
Alignm identity: | 640 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 58 |
Conread position: | 6-831 |
Cow position: | chr17:11783301-11784165 (view UCSC Genome Browser custom track) |
Alignm length: | 873 |
Alignm identity: | 630 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 167 |
Conread position: | 6-831 |
Cow position: | chr17:14216579-14215719 (view UCSC Genome Browser custom track) |
Alignm length: | 867 |
Alignm identity: | 630 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 71 |
Conread position: | 6-831 |
Cow position: | chr17:15142913-15142048 (view UCSC Genome Browser custom track) |
Alignm length: | 881 |
Alignm identity: | 628 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 31 |
Conread position: | 6-831 |
Cow position: | chr17:23324000-23323141 (view UCSC Genome Browser custom track) |
Alignm length: | 865 |
Alignm identity: | 618 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 166 |
Conread position: | 6-831 |
Cow position: | chr17:34156582-34157429 (view UCSC Genome Browser custom track) |
Alignm length: | 858 |
Alignm identity: | 618 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 43 |
Conread position: | 6-833 |
Cow position: | chr17:151417-150582 (view UCSC Genome Browser custom track) |
Alignm length: | 861 |
Alignm identity: | 614 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 343, 167 |
Conread position: | 6-833 |
Cow position: | chr17:20100020-20099162 (view UCSC Genome Browser custom track) |
Alignm length: | 868 |
Alignm identity: | 646 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 56 |
Conread position: | 6-833 |
Cow position: | chr17:20402880-20403728 (view UCSC Genome Browser custom track) |
Alignm length: | 869 |
Alignm identity: | 643 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 68 |
Conread position: | 7-833 |
Cow position: | chr17:4082509-4083328 (view UCSC Genome Browser custom track) |
Alignm length: | 858 |
Alignm identity: | 617 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 36 |
Conread position: | 9-833 |
Cow position: | chr17:18194282-18195099 (view UCSC Genome Browser custom track) |
Alignm length: | 855 |
Alignm identity: | 596 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 8 |
Conread position: | 16-833 |
Cow position: | chr17:14040567-14039736 (view UCSC Genome Browser custom track) |
Alignm length: | 844 |
Alignm identity: | 612 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 157 |
Conread position: | 22-833 |
Cow position: | chr17:4942260-4941421 (view UCSC Genome Browser custom track) |
Alignm length: | 856 |
Alignm identity: | 592 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 154 |
Conread position: | 24-558 |
Cow position: | chr17:13705030-13705575 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 152 |
Conread position: | 25-735 |
Cow position: | chr17:16899821-16899107 (view UCSC Genome Browser custom track) |
Alignm length: | 735 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 143 |
Conread position: | 26-831 |
Cow position: | chr17:24782633-24783469 (view UCSC Genome Browser custom track) |
Alignm length: | 847 |
Alignm identity: | 621 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 150 |
Conread position: | 27-831 |
Cow position: | chr17:3655820-3654982 (view UCSC Genome Browser custom track) |
Alignm length: | 842 |
Alignm identity: | 601 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 149 |
Conread position: | 63-833 |
Cow position: | chr17:1787410-1786652 (view UCSC Genome Browser custom track) |
Alignm length: | 788 |
Alignm identity: | 572 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 62 |
Conread position: | 77-833 |
Cow position: | chr17:15851219-15852002 (view UCSC Genome Browser custom track) |
Alignm length: | 791 |
Alignm identity: | 588 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 96 |
Conread position: | 88-825 |
Cow position: | chr17:2174379-2175098 (view UCSC Genome Browser custom track) |
Alignm length: | 755 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 87 |
Conread position: | 113-483 |
Cow position: | chr17:42265531-42265915 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 57 |
Conread position: | 113-821 |
Cow position: | chr17:2030684-2031414 (view UCSC Genome Browser custom track) |
Alignm length: | 745 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 52 |
Conread position: | 130-825 |
Cow position: | chr17:3325872-3326536 (view UCSC Genome Browser custom track) |
Alignm length: | 709 |
Alignm identity: | 455 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 101, 39 |
Conread position: | 143-812 |
Cow position: | chr17:22558581-22559257 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 12 |
Conread position: | 154-623 |
Cow position: | chr17:13990741-13990255 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 46 |
Conread position: | 176-831 |
Cow position: | chr17:9080772-9080113 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 30 |
Conread position: | 190-635 |
Cow position: | chr17:31532867-31533318 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 309 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 31, 20 |
Conread position: | 209-833 |
Cow position: | chr17:16121853-16121271 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 22 |
Conread position: | 218-775 |
Cow position: | chr17:36575-37150 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 34 |
Conread position: | 228-665 |
Cow position: | chr17:1704007-1703557 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 78 |
Conread position: | 228-833 |
Cow position: | chr17:14240183-14240814 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 551 |
Conread position: | 243-833 |
Cow position: | chr17:8202671-8203248 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 96 |
Conread position: | 257-833 |
Cow position: | chr17:239057-239620 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 249 |
Conread position: | 264-823 |
Cow position: | chr17:11748480-11749031 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 350 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 27, 40 |
Conread position: | 268-805 |
Cow position: | chr17:6611764-6611205 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 476 |
Conread position: | 270-826 |
Cow position: | chr17:2149197-2149729 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 9 |
Conread position: | 278-816 |
Cow position: | chr17:15371960-15372516 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 198 |
Conread position: | 318-463 |
Cow position: | chr17:12669606-12669461 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 42, 19 |
Conread position: | 355-824 |
Cow position: | chr17:21418404-21418863 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 168 |
Conread position: | 362-814 |
Cow position: | chr17:13878745-13878293 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 290 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 84, 138 |
Conread position: | 369-762 |
Cow position: | chr17:4784016-4783619 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 274 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 9, 55 |
Conread position: | 390-833 |
Cow position: | chr17:2078141-2077685 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 56 |
Conread position: | 431-831 |
Cow position: | chr17:20390185-20389778 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 298 |
Conread position: | 455-833 |
Cow position: | chr17:4604794-4605169 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 248 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 231, 161 |
Conread position: | 471-831 |
Cow position: | chr17:182517-182883 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 50 |
Conread position: | 481-833 |
Cow position: | chr17:13675336-13674983 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 255 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 50, 12 |
Conread position: | 496-833 |
Cow position: | chr17:33284867-33284536 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 249 |
Conread position: | 506-816 |
Cow position: | chr17:27793801-27793485 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 5 |
Conread position: | 519-831 |
Cow position: | chr17:39049202-39049522 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 208 |
Conread position: | 549-831 |
Cow position: | chr17:21769987-21769699 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 211 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 8, 176 |
Conread position: | 557-825 |
Cow position: | chr17:19609154-19608902 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 193 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 561-825 |
Cow position: | chr17:13705824-13706079 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 183 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 174, 94 |
Conread position: | 564-833 |
Cow position: | chr17:23038618-23038877 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 202 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 122, 22 |
Conread position: | 644-833 |
Cow position: | chr17:3640783-3640595 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 142 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 65, 101 |
Show alignments to all cow chromosomes.