Cow genome map

Conread name: Lng1-LNG010013G12

Conread position: 1-512
Cow position: chr17:3642380-3641850 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 1-640
Cow position: chr17:1880551-1881216 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 100

Conread position: 1-654
Cow position: chr17:14894609-14895300 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 167

Conread position: 1-764
Cow position: chr17:16857070-16856268 (view UCSC Genome Browser custom track)
Alignm length: 806
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-816
Cow position: chr17:19268382-19267535 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 176

Conread position: 1-825
Cow position: chr17:2580071-2580923 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 161

Conread position: 1-825
Cow position: chr17:40805265-40806110 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 117

Conread position: 1-831
Cow position: chr17:250616-251444 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 81

Conread position: 1-831
Cow position: chr17:5227071-5227930 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 112

Conread position: 1-833
Cow position: chr17:6069005-6069859 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 164

Conread position: 1-833
Cow position: chr17:6260298-6261170 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 673

Conread position: 1-833
Cow position: chr17:20081408-20080572 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 644
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 64

Conread position: 1-833
Cow position: chr17:24029554-24028691 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 173

Conread position: 2-708
Cow position: chr17:22132686-22133380 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 42

Conread position: 2-833
Cow position: chr17:20087292-20086460 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 121

Conread position: 4-833
Cow position: chr17:11087270-11086414 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 13

Conread position: 5-831
Cow position: chr17:2247615-2246774 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 14

Conread position: 5-833
Cow position: chr17:6000991-6000182 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 101

Conread position: 6-604
Cow position: chr17:20488401-20489020 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 6-764
Cow position: chr17:15324282-15325084 (view UCSC Genome Browser custom track)
Alignm length: 806
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 170

Conread position: 6-816
Cow position: chr17:31767585-31766744 (view UCSC Genome Browser custom track)
Alignm length: 845
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 167

Conread position: 6-820
Cow position: chr17:2262557-2263404 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-820
Cow position: chr17:43988954-43989800 (view UCSC Genome Browser custom track)
Alignm length: 851
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-824
Cow position: chr17:20811435-20810618 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 536
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 40, 174

Conread position: 6-825
Cow position: chr17:15436245-15437085 (view UCSC Genome Browser custom track)
Alignm length: 853
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-830
Cow position: chr17:6120165-6121016 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position: chr17:4060559-4061411 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 58

Conread position: 6-831
Cow position: chr17:11783301-11784165 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 167

Conread position: 6-831
Cow position: chr17:14216579-14215719 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 71

Conread position: 6-831
Cow position: chr17:15142913-15142048 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 31

Conread position: 6-831
Cow position: chr17:23324000-23323141 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 166

Conread position: 6-831
Cow position: chr17:34156582-34157429 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 43

Conread position: 6-833
Cow position: chr17:151417-150582 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 167

Conread position: 6-833
Cow position: chr17:20100020-20099162 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 56

Conread position: 6-833
Cow position: chr17:20402880-20403728 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 68

Conread position: 7-833
Cow position: chr17:4082509-4083328 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 36

Conread position: 9-833
Cow position: chr17:18194282-18195099 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 8

Conread position: 16-833
Cow position: chr17:14040567-14039736 (view UCSC Genome Browser custom track)
Alignm length: 844
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 157

Conread position: 22-833
Cow position: chr17:4942260-4941421 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 154

Conread position: 24-558
Cow position: chr17:13705030-13705575 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 152

Conread position: 25-735
Cow position: chr17:16899821-16899107 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 143

Conread position: 26-831
Cow position: chr17:24782633-24783469 (view UCSC Genome Browser custom track)
Alignm length: 847
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 27-831
Cow position: chr17:3655820-3654982 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 149

Conread position: 63-833
Cow position: chr17:1787410-1786652 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 62

Conread position: 77-833
Cow position: chr17:15851219-15852002 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 96

Conread position: 88-825
Cow position: chr17:2174379-2175098 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 113-483
Cow position: chr17:42265531-42265915 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 57

Conread position: 113-821
Cow position: chr17:2030684-2031414 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 52

Conread position: 130-825
Cow position: chr17:3325872-3326536 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 455
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 101, 39

Conread position: 143-812
Cow position: chr17:22558581-22559257 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 12

Conread position: 154-623
Cow position: chr17:13990741-13990255 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 46

Conread position: 176-831
Cow position: chr17:9080772-9080113 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 30

Conread position: 190-635
Cow position: chr17:31532867-31533318 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 309
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 20

Conread position: 209-833
Cow position: chr17:16121853-16121271 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 22

Conread position: 218-775
Cow position: chr17:36575-37150 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 34

Conread position: 228-665
Cow position: chr17:1704007-1703557 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 78

Conread position: 228-833
Cow position: chr17:14240183-14240814 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 551

Conread position: 243-833
Cow position: chr17:8202671-8203248 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 96

Conread position: 257-833
Cow position: chr17:239057-239620 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 249

Conread position: 264-823
Cow position: chr17:11748480-11749031 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 350
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 40

Conread position: 268-805
Cow position: chr17:6611764-6611205 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 476

Conread position: 270-826
Cow position: chr17:2149197-2149729 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 9

Conread position: 278-816
Cow position: chr17:15371960-15372516 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 198

Conread position: 318-463
Cow position: chr17:12669606-12669461 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 19

Conread position: 355-824
Cow position: chr17:21418404-21418863 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 168

Conread position: 362-814
Cow position: chr17:13878745-13878293 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 290
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 138

Conread position: 369-762
Cow position: chr17:4784016-4783619 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 274
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 55

Conread position: 390-833
Cow position: chr17:2078141-2077685 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 56

Conread position: 431-831
Cow position: chr17:20390185-20389778 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 298

Conread position: 455-833
Cow position: chr17:4604794-4605169 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 231, 161

Conread position: 471-831
Cow position: chr17:182517-182883 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 50

Conread position: 481-833
Cow position: chr17:13675336-13674983 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 12

Conread position: 496-833
Cow position: chr17:33284867-33284536 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 249

Conread position: 506-816
Cow position: chr17:27793801-27793485 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 5

Conread position: 519-831
Cow position: chr17:39049202-39049522 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 549-831
Cow position: chr17:21769987-21769699 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 176

Conread position: 557-825
Cow position: chr17:19609154-19608902 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 561-825
Cow position: chr17:13705824-13706079 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 174, 94

Conread position: 564-833
Cow position: chr17:23038618-23038877 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 122, 22

Conread position: 644-833
Cow position: chr17:3640783-3640595 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 101

Show alignments to all cow chromosomes.