Cow genome map
| Conread name: | Lng1-LNG010013G12 |
| Conread position: | 1-559 |
| Cow position: | chr18:32652874-32653458 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 1-566 |
| Cow position: | chr18:51238958-51239537 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 99 |
| Conread position: | 1-598 |
| Cow position: | chr18:36508996-36509624 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 1-832 |
| Cow position: | chr18:27837655-27836797 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 642 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 1-833 |
| Cow position: | chr18:14416642-14417486 (view UCSC Genome Browser custom track) |
| Alignm length: | 862 |
| Alignm identity: | 655 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 1-833 |
| Cow position: | chr18:16088804-16089637 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 655 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 164 |
| Conread position: | 1-833 |
| Cow position: | chr18:16175959-16175101 (view UCSC Genome Browser custom track) |
| Alignm length: | 864 |
| Alignm identity: | 657 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 177 |
| Conread position: | 1-833 |
| Cow position: | chr18:23798305-23799167 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 665 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 176 |
| Conread position: | 1-833 |
| Cow position: | chr18:28973226-28972367 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 669 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 174 |
| Conread position: | 1-833 |
| Cow position: | chr18:40479046-40479912 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 654 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 1-833 |
| Cow position: | chr18:52651574-52652430 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 673 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 155 |
| Conread position: | 2-833 |
| Cow position: | chr18:54023477-54022612 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 654 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 3-833 |
| Cow position: | chr18:29047274-29046439 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 4-505 |
| Cow position: | chr18:4946739-4947242 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 4-610 |
| Cow position: | chr18:5517513-5516921 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 371 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 6-509 |
| Cow position: | chr18:33952915-33952391 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 167 |
| Conread position: | 6-752 |
| Cow position: | chr18:25363882-25364631 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 151 |
| Conread position: | 6-820 |
| Cow position: | chr18:51342348-51343192 (view UCSC Genome Browser custom track) |
| Alignm length: | 849 |
| Alignm identity: | 612 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 166 |
| Conread position: | 6-825 |
| Cow position: | chr18:41840146-41839295 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 639 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 170 |
| Conread position: | 6-825 |
| Cow position: | chr18:51661007-51661852 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 624 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 167 |
| Conread position: | 6-831 |
| Cow position: | chr18:11274444-11273600 (view UCSC Genome Browser custom track) |
| Alignm length: | 862 |
| Alignm identity: | 634 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 166 |
| Conread position: | 6-831 |
| Cow position: | chr18:16079333-16080190 (view UCSC Genome Browser custom track) |
| Alignm length: | 864 |
| Alignm identity: | 636 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 170 |
| Conread position: | 6-831 |
| Cow position: | chr18:19353033-19353882 (view UCSC Genome Browser custom track) |
| Alignm length: | 864 |
| Alignm identity: | 638 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 170 |
| Conread position: | 6-833 |
| Cow position: | chr18:18496373-18495537 (view UCSC Genome Browser custom track) |
| Alignm length: | 864 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 124 |
| Conread position: | 6-833 |
| Cow position: | chr18:54170870-54169989 (view UCSC Genome Browser custom track) |
| Alignm length: | 890 |
| Alignm identity: | 651 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 76 |
| Conread position: | 6-833 |
| Cow position: | chr18:54271167-54271996 (view UCSC Genome Browser custom track) |
| Alignm length: | 854 |
| Alignm identity: | 606 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 7-832 |
| Cow position: | chr18:20693496-20692662 (view UCSC Genome Browser custom track) |
| Alignm length: | 854 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 165 |
| Conread position: | 7-833 |
| Cow position: | chr18:33141920-33142756 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 8-830 |
| Cow position: | chr18:29237607-29238410 (view UCSC Genome Browser custom track) |
| Alignm length: | 846 |
| Alignm identity: | 610 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 75 |
| Conread position: | 12-630 |
| Cow position: | chr18:51275364-51274734 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 17-833 |
| Cow position: | chr18:14131066-14131913 (view UCSC Genome Browser custom track) |
| Alignm length: | 854 |
| Alignm identity: | 646 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 159 |
| Conread position: | 19-382 |
| Cow position: | chr18:33336547-33336927 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 159 |
| Conread position: | 44-525 |
| Cow position: | chr18:37489251-37489722 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 6 |
| Conread position: | 77-833 |
| Cow position: | chr18:37506697-37507478 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 595 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 96 |
| Conread position: | 85-833 |
| Cow position: | chr18:51481631-51482376 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 101-833 |
| Cow position: | chr18:6062030-6061291 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 469 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 107-758 |
| Cow position: | chr18:36256131-36255477 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 108-833 |
| Cow position: | chr18:2475395-2474678 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 464 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 158-833 |
| Cow position: | chr18:27988008-27988704 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 206-833 |
| Cow position: | chr18:33300200-33300814 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 418 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 141, 27 |
| Conread position: | 215-830 |
| Cow position: | chr18:47742385-47743020 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 56 |
| Conread position: | 234-833 |
| Cow position: | chr18:15856145-15856735 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 56 |
| Conread position: | 243-822 |
| Cow position: | chr18:54005262-54004666 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 52 |
| Conread position: | 272-833 |
| Cow position: | chr18:38343339-38342775 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 220 |
| Conread position: | 278-632 |
| Cow position: | chr18:15850382-15850734 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 81, 24 |
| Conread position: | 324-553 |
| Cow position: | chr18:33337214-33337437 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 220, 16 |
| Conread position: | 324-833 |
| Cow position: | chr18:29407440-29406936 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 340 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 335-833 |
| Cow position: | chr18:56013588-56014103 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 194 |
| Conread position: | 342-832 |
| Cow position: | chr18:8101415-8100900 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 320 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 85, 108 |
| Conread position: | 353-743 |
| Cow position: | chr18:2297913-2297507 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 56, 141 |
| Conread position: | 379-822 |
| Cow position: | chr18:51461996-51461544 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 353 |
| Conread position: | 427-831 |
| Cow position: | chr18:25352364-25352779 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 330 |
| Conread position: | 432-830 |
| Cow position: | chr18:40345285-40344883 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 18 |
| Conread position: | 434-816 |
| Cow position: | chr18:88720-89084 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 117, 21 |
| Conread position: | 438-833 |
| Cow position: | chr18:29865490-29865092 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 39 |
| Conread position: | 462-833 |
| Cow position: | chr18:51625157-51624791 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 230, 24 |
| Conread position: | 477-833 |
| Cow position: | chr18:160066-159710 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 79, 149 |
| Conread position: | 485-816 |
| Cow position: | chr18:37663511-37663826 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 156 |
| Conread position: | 517-825 |
| Cow position: | chr18:34043813-34044112 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 559-833 |
| Cow position: | chr18:16137607-16137336 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 125, 91 |
| Conread position: | 567-819 |
| Cow position: | chr18:46876081-46875838 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 117, 175 |
| Conread position: | 572-823 |
| Cow position: | chr18:11927020-11927279 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 579-827 |
| Cow position: | chr18:18851640-18851884 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 72, 98 |
| Conread position: | 596-831 |
| Cow position: | chr18:25921252-25921495 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 168 |
| Conread position: | 600-833 |
| Cow position: | chr18:36509897-36510134 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 86, 139 |
| Conread position: | 609-831 |
| Cow position: | chr18:51694992-51695217 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 89, 117 |
| Conread position: | 647-833 |
| Cow position: | chr18:35054470-35054647 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 129, 73 |
Show alignments to all cow chromosomes.