Cow genome map
| Conread name: | Lng1-LNG010013G12 |
| Conread position: | 1-563 |
| Cow position: | chr19:33942266-33942858 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 1-636 |
| Cow position: | chr19:2273717-2273058 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 1-816 |
| Cow position: | chr19:39391172-39392024 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 645 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 1-830 |
| Cow position: | chr19:341883-342746 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 628 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 164 |
| Conread position: | 1-831 |
| Cow position: | chr19:40851772-40850939 (view UCSC Genome Browser custom track) |
| Alignm length: | 855 |
| Alignm identity: | 632 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 1-832 |
| Cow position: | chr19:28406045-28405188 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 633 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 174 |
| Conread position: | 1-833 |
| Cow position: | chr19:438774-437917 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 648 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 1-833 |
| Cow position: | chr19:892941-892114 (view UCSC Genome Browser custom track) |
| Alignm length: | 850 |
| Alignm identity: | 646 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 120 |
| Conread position: | 1-833 |
| Cow position: | chr19:4386288-4387134 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 656 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 164 |
| Conread position: | 1-833 |
| Cow position: | chr19:12773779-12774626 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 644 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 1-833 |
| Cow position: | chr19:33874087-33874937 (view UCSC Genome Browser custom track) |
| Alignm length: | 862 |
| Alignm identity: | 653 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 2-583 |
| Cow position: | chr19:34046879-34047475 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 390 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 5-830 |
| Cow position: | chr19:27036891-27036106 (view UCSC Genome Browser custom track) |
| Alignm length: | 845 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 6-632 |
| Cow position: | chr19:75582-74942 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 7 |
| Conread position: | 6-819 |
| Cow position: | chr19:43144379-43145224 (view UCSC Genome Browser custom track) |
| Alignm length: | 850 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 167 |
| Conread position: | 6-831 |
| Cow position: | chr19:773261-774124 (view UCSC Genome Browser custom track) |
| Alignm length: | 873 |
| Alignm identity: | 644 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 173 |
| Conread position: | 6-831 |
| Cow position: | chr19:7342733-7343590 (view UCSC Genome Browser custom track) |
| Alignm length: | 860 |
| Alignm identity: | 630 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 170 |
| Conread position: | 6-831 |
| Cow position: | chr19:20105379-20106246 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 628 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 90 |
| Conread position: | 6-831 |
| Cow position: | chr19:32211407-32210555 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 606 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 6-833 |
| Cow position: | chr19:28580992-28580150 (view UCSC Genome Browser custom track) |
| Alignm length: | 861 |
| Alignm identity: | 648 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 170 |
| Conread position: | 6-833 |
| Cow position: | chr19:39184872-39184019 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 655 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 170 |
| Conread position: | 6-833 |
| Cow position: | chr19:50723211-50724076 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 629 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 120 |
| Conread position: | 7-831 |
| Cow position: | chr19:5900827-5899989 (view UCSC Genome Browser custom track) |
| Alignm length: | 860 |
| Alignm identity: | 624 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 8-757 |
| Cow position: | chr19:7069984-7070738 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 112 |
| Conread position: | 22-831 |
| Cow position: | chr19:38978-39818 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 612 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 150 |
| Conread position: | 31-689 |
| Cow position: | chr19:32193705-32194402 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 51-757 |
| Cow position: | chr19:3112979-3113693 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 483 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 171, 7 |
| Conread position: | 59-821 |
| Cow position: | chr19:29140694-29141448 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 59 |
| Conread position: | 77-831 |
| Cow position: | chr19:28594291-28595056 (view UCSC Genome Browser custom track) |
| Alignm length: | 782 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 96 |
| Conread position: | 80-808 |
| Cow position: | chr19:136046-135302 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 80-813 |
| Cow position: | chr19:9707386-9706669 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 89 |
| Conread position: | 85-713 |
| Cow position: | chr19:39095928-39096542 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 76 |
| Conread position: | 101-830 |
| Cow position: | chr19:38061208-38061954 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 472 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 129, 72 |
| Conread position: | 130-764 |
| Cow position: | chr19:5028278-5027638 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 135-825 |
| Cow position: | chr19:40795402-40794728 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 453 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 116, 38 |
| Conread position: | 190-833 |
| Cow position: | chr19:1588361-1587720 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 269 |
| Conread position: | 228-833 |
| Cow position: | chr19:7489243-7489876 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 386 |
| Conread position: | 233-824 |
| Cow position: | chr19:11522262-11521657 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 251 |
| Conread position: | 247-569 |
| Cow position: | chr19:204898-205242 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 253-410 |
| Cow position: | chr19:39667817-39667654 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 263-833 |
| Cow position: | chr19:5729806-5730377 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 145 |
| Conread position: | 284-506 |
| Cow position: | chr19:35379544-35379773 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 109 |
| Conread position: | 329-583 |
| Cow position: | chr19:23376836-23377085 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 330-833 |
| Cow position: | chr19:173251-173780 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 201 |
| Conread position: | 332-753 |
| Cow position: | chr19:25924341-25924779 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 303 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 95, 306 |
| Conread position: | 333-742 |
| Cow position: | chr19:48861189-48860775 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 172 |
| Conread position: | 335-790 |
| Cow position: | chr19:28367032-28367472 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 317 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 164, 134 |
| Conread position: | 337-807 |
| Cow position: | chr19:33442582-33442118 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 113, 130 |
| Conread position: | 337-833 |
| Cow position: | chr19:256274-256786 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 189 |
| Conread position: | 344-820 |
| Cow position: | chr19:30756238-30756726 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 415 |
| Conread position: | 354-833 |
| Cow position: | chr19:6713673-6713216 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 86 |
| Conread position: | 375-816 |
| Cow position: | chr19:32204349-32204778 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 222 |
| Conread position: | 386-833 |
| Cow position: | chr19:40816450-40815987 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 403 |
| Conread position: | 391-831 |
| Cow position: | chr19:33527184-33527634 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 338 |
| Conread position: | 432-831 |
| Cow position: | chr19:52150569-52150162 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 297 |
| Conread position: | 457-833 |
| Cow position: | chr19:39667389-39667020 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 202 |
| Conread position: | 464-829 |
| Cow position: | chr19:33653578-33653211 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 507-833 |
| Cow position: | chr19:788595-788919 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 132 |
| Conread position: | 533-833 |
| Cow position: | chr19:44031600-44031899 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 570-833 |
| Cow position: | chr19:205761-206029 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 181 |
| Conread position: | 600-816 |
| Cow position: | chr19:33942857-33943076 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 93, 122 |
| Conread position: | 613-831 |
| Cow position: | chr19:16319331-16319109 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 113 |
| Conread position: | 630-833 |
| Cow position: | chr19:19178810-19178613 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 36 |
Show alignments to all cow chromosomes.