Cow genome map


           Conread name:
           Lng1-LNG010013G12
        

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               1-636
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               1-816
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               645
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               1-830
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               628
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 164
               

               Conread position:
               1-831
               

               Cow position:
               
               

               Alignm length:
               855
               

               Alignm identity:
               632
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 87
               

               Conread position:
               1-832
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               633
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 174
               

               Conread position:
               1-833
               

               Cow position:
               
               

               Alignm length:
               869
               

               Alignm identity:
               648
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               1-833
               

               Cow position:
               
               

               Alignm length:
               850
               

               Alignm identity:
               646
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 120
               

               Conread position:
               1-833
               

               Cow position:
               
               

               Alignm length:
               866
               

               Alignm identity:
               656
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 164
               

               Conread position:
               1-833
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               644
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               1-833
               

               Cow position:
               
               

               Alignm length:
               862
               

               Alignm identity:
               653
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               2-583
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               390
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               5-830
               

               Cow position:
               
               

               Alignm length:
               845
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               6-632
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 7
               

               Conread position:
               6-819
               

               Cow position:
               
               

               Alignm length:
               850
               

               Alignm identity:
               596
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 167
               

               Conread position:
               6-831
               

               Cow position:
               
               

               Alignm length:
               873
               

               Alignm identity:
               644
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 173
               

               Conread position:
               6-831
               

               Cow position:
               
               

               Alignm length:
               860
               

               Alignm identity:
               630
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 170
               

               Conread position:
               6-831
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               628
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 90
               

               Conread position:
               6-831
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               606
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               6-833
               

               Cow position:
               
               

               Alignm length:
               861
               

               Alignm identity:
               648
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 170
               

               Conread position:
               6-833
               

               Cow position:
               
               

               Alignm length:
               866
               

               Alignm identity:
               655
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 170
               

               Conread position:
               6-833
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               629
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 120
               

               Conread position:
               7-831
               

               Cow position:
               
               

               Alignm length:
               860
               

               Alignm identity:
               624
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               8-757
               

               Cow position:
               
               

               Alignm length:
               783
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 112
               

               Conread position:
               22-831
               

               Cow position:
               
               

               Alignm length:
               847
               

               Alignm identity:
               612
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 150
               

               Conread position:
               31-689
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 145
               

               Conread position:
               51-757
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               483
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               171, 7
               

               Conread position:
               59-821
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 59
               

               Conread position:
               77-831
               

               Cow position:
               
               

               Alignm length:
               782
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 96
               

               Conread position:
               80-808
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 86
               

               Conread position:
               80-813
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 89
               

               Conread position:
               85-713
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 76
               

               Conread position:
               101-830
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               472
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               129, 72
               

               Conread position:
               130-764
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               135-825
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               453
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               116, 38
               

               Conread position:
               190-833
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 269
               

               Conread position:
               228-833
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 386
               

               Conread position:
               233-824
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 251
               

               Conread position:
               247-569
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               253-410
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               263-833
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 145
               

               Conread position:
               284-506
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 109
               

               Conread position:
               329-583
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               35, 87
               

               Conread position:
               330-833
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 201
               

               Conread position:
               332-753
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               303
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               95, 306
               

               Conread position:
               333-742
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 172
               

               Conread position:
               335-790
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               317
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               164, 134
               

               Conread position:
               337-807
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               309
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               113, 130
               

               Conread position:
               337-833
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 189
               

               Conread position:
               344-820
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 415
               

               Conread position:
               354-833
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 86
               

               Conread position:
               375-816
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 222
               

               Conread position:
               386-833
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 403
               

               Conread position:
               391-831
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 338
               

               Conread position:
               432-831
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 297
               

               Conread position:
               457-833
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 202
               

               Conread position:
               464-829
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               507-833
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 132
               

               Conread position:
               533-833
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               570-833
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 181
               

               Conread position:
               600-816
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               93, 122
               

               Conread position:
               613-831
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               83, 113
               

               Conread position:
               630-833
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 36
               
Show alignments to all cow chromosomes.