Cow genome map

Conread name: Lng1-LNG010013G12

Conread position: 1-425
Cow position:
Alignm length: 444
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 173

Conread position: 1-600
Cow position:
Alignm length: 628
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 176

Conread position: 1-647
Cow position:
Alignm length: 678
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 173

Conread position: 1-656
Cow position:
Alignm length: 689
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 168

Conread position: 1-717
Cow position:
Alignm length: 751
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 57

Conread position: 1-764
Cow position:
Alignm length: 804
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 176

Conread position: 1-825
Cow position:
Alignm length: 865
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 152

Conread position: 1-825
Cow position:
Alignm length: 869
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-825
Cow position:
Alignm length: 869
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 109

Conread position: 1-829
Cow position:
Alignm length: 857
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 16

Conread position: 1-830
Cow position:
Alignm length: 855
Alignm identity: 623
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 1-831
Cow position:
Alignm length: 872
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 869
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 176

Conread position: 1-833
Cow position:
Alignm length: 863
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 871
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 64

Conread position: 1-833
Cow position:
Alignm length: 883
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 28

Conread position: 1-833
Cow position:
Alignm length: 868
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 73

Conread position: 1-833
Cow position:
Alignm length: 872
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 178

Conread position: 1-833
Cow position:
Alignm length: 879
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 127

Conread position: 1-833
Cow position:
Alignm length: 875
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 869
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 2-527
Cow position:
Alignm length: 553
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 16

Conread position: 2-816
Cow position:
Alignm length: 855
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 181

Conread position: 2-833
Cow position:
Alignm length: 872
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 174

Conread position: 2-833
Cow position:
Alignm length: 866
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 107

Conread position: 5-582
Cow position:
Alignm length: 590
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 29

Conread position: 5-820
Cow position:
Alignm length: 839
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 86

Conread position: 5-822
Cow position:
Alignm length: 855
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 98

Conread position: 6-475
Cow position:
Alignm length: 490
Alignm identity: 329
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 223, 54

Conread position: 6-500
Cow position:
Alignm length: 513
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 170

Conread position: 6-547
Cow position:
Alignm length: 574
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 168

Conread position: 6-616
Cow position:
Alignm length: 639
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 6-674
Cow position:
Alignm length: 698
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-704
Cow position:
Alignm length: 727
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 36

Conread position: 6-718
Cow position:
Alignm length: 736
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 170

Conread position: 6-743
Cow position:
Alignm length: 774
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 22

Conread position: 6-757
Cow position:
Alignm length: 793
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 170

Conread position: 6-816
Cow position:
Alignm length: 845
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 90

Conread position: 6-825
Cow position:
Alignm length: 844
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 52

Conread position: 6-825
Cow position:
Alignm length: 862
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 174

Conread position: 6-830
Cow position:
Alignm length: 873
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 134

Conread position: 6-830
Cow position:
Alignm length: 867
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 565

Conread position: 6-831
Cow position:
Alignm length: 871
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 6-831
Cow position:
Alignm length: 860
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position:
Alignm length: 861
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 165

Conread position: 6-831
Cow position:
Alignm length: 859
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position:
Alignm length: 856
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 52

Conread position: 6-831
Cow position:
Alignm length: 856
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 159

Conread position: 6-831
Cow position:
Alignm length: 867
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 10

Conread position: 6-833
Cow position:
Alignm length: 868
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 6-833
Cow position:
Alignm length: 848
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 54

Conread position: 6-833
Cow position:
Alignm length: 861
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 34

Conread position: 6-833
Cow position:
Alignm length: 878
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 7-810
Cow position:
Alignm length: 838
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 169

Conread position: 7-833
Cow position:
Alignm length: 858
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 8-833
Cow position:
Alignm length: 859
Alignm identity: 644
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 8

Conread position: 12-826
Cow position:
Alignm length: 851
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 100

Conread position: 13-832
Cow position:
Alignm length: 844
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 14-779
Cow position:
Alignm length: 833
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 102

Conread position: 17-545
Cow position:
Alignm length: 553
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 121

Conread position: 17-832
Cow position:
Alignm length: 854
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 95

Conread position: 23-833
Cow position:
Alignm length: 851
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 65

Conread position: 32-831
Cow position:
Alignm length: 836
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 145

Conread position: 36-491
Cow position:
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 28

Conread position: 36-829
Cow position:
Alignm length: 826
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 35

Conread position: 38-601
Cow position:
Alignm length: 611
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 19

Conread position: 38-831
Cow position:
Alignm length: 834
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 6

Conread position: 49-833
Cow position:
Alignm length: 814
Alignm identity: 515
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 47

Conread position: 51-823
Cow position:
Alignm length: 797
Alignm identity: 500
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 194, 39

Conread position: 64-831
Cow position:
Alignm length: 802
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 109

Conread position: 77-833
Cow position:
Alignm length: 797
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 96

Conread position: 77-833
Cow position:
Alignm length: 787
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 96

Conread position: 78-833
Cow position:
Alignm length: 790
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 91

Conread position: 80-833
Cow position:
Alignm length: 795
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 95

Conread position: 88-833
Cow position:
Alignm length: 787
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 85

Conread position: 95-641
Cow position:
Alignm length: 573
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 78

Conread position: 108-833
Cow position:
Alignm length: 763
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 68

Conread position: 109-667
Cow position:
Alignm length: 586
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 56

Conread position: 111-518
Cow position:
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 14

Conread position: 119-833
Cow position:
Alignm length: 755
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 46

Conread position: 120-831
Cow position:
Alignm length: 736
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 53

Conread position: 125-494
Cow position:
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 48

Conread position: 128-584
Cow position:
Alignm length: 482
Alignm identity: 295
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 98, 45

Conread position: 130-820
Cow position:
Alignm length: 723
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 43

Conread position: 142-831
Cow position:
Alignm length: 736
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 20

Conread position: 145-833
Cow position:
Alignm length: 711
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 99

Conread position: 167-609
Cow position:
Alignm length: 460
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 316

Conread position: 185-825
Cow position:
Alignm length: 670
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 158

Conread position: 186-493
Cow position:
Alignm length: 324
Alignm identity: 227
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 159, 15

Conread position: 189-826
Cow position:
Alignm length: 649
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 333

Conread position: 230-483
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 115, 0

Conread position: 246-666
Cow position:
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 49

Conread position: 247-833
Cow position:
Alignm length: 608
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 48

Conread position: 253-799
Cow position:
Alignm length: 553
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 62

Conread position: 258-538
Cow position:
Alignm length: 297
Alignm identity: 201
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 251

Conread position: 259-820
Cow position:
Alignm length: 592
Alignm identity: 371
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 126, 74

Conread position: 259-833
Cow position:
Alignm length: 600
Alignm identity: 373
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 29

Conread position: 260-816
Cow position:
Alignm length: 587
Alignm identity: 393
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 54, 121

Conread position: 263-684
Cow position:
Alignm length: 441
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 32

Conread position: 267-812
Cow position:
Alignm length: 560
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 72

Conread position: 270-622
Cow position:
Alignm length: 366
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 92, 10

Conread position: 272-831
Cow position:
Alignm length: 578
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 26

Conread position: 277-826
Cow position:
Alignm length: 565
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 218

Conread position: 283-833
Cow position:
Alignm length: 581
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 136

Conread position: 288-833
Cow position:
Alignm length: 573
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 220

Conread position: 289-829
Cow position:
Alignm length: 564
Alignm identity: 343
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 52

Conread position: 300-832
Cow position:
Alignm length: 552
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 325

Conread position: 306-813
Cow position:
Alignm length: 519
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 138

Conread position: 337-824
Cow position:
Alignm length: 500
Alignm identity: 316
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 74

Conread position: 337-825
Cow position:
Alignm length: 502
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 367

Conread position: 339-810
Cow position:
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 54

Conread position: 343-832
Cow position:
Alignm length: 495
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 7

Conread position: 366-833
Cow position:
Alignm length: 478
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 99

Conread position: 391-831
Cow position:
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 338

Conread position: 408-831
Cow position:
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 47

Conread position: 416-831
Cow position:
Alignm length: 429
Alignm identity: 276
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 48

Conread position: 420-831
Cow position:
Alignm length: 420
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 309

Conread position: 430-829
Cow position:
Alignm length: 404
Alignm identity: 267
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 12, 50

Conread position: 430-833
Cow position:
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 241

Conread position: 431-831
Cow position:
Alignm length: 409
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 298

Conread position: 434-831
Cow position:
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 33

Conread position: 461-833
Cow position:
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 199

Conread position: 481-822
Cow position:
Alignm length: 345
Alignm identity: 222
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 200, 33

Conread position: 481-833
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 215

Conread position: 481-833
Cow position:
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 12

Conread position: 486-831
Cow position:
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 303

Conread position: 489-833
Cow position:
Alignm length: 352
Alignm identity: 250
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 199, 45

Conread position: 509-831
Cow position:
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 5

Conread position: 516-830
Cow position:
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 83

Conread position: 523-833
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 87

Conread position: 538-806
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 19, 189

Conread position: 555-833
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 170, 35

Conread position: 560-829
Cow position:
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 90

Conread position: 560-833
Cow position:
Alignm length: 280
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 123, 78

Conread position: 562-833
Cow position:
Alignm length: 275
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 154

Conread position: 574-822
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 188, 46

Conread position: 577-833
Cow position:
Alignm length: 260
Alignm identity: 189
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 109, 37

Conread position: 592-831
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 58

Conread position: 592-833
Cow position:
Alignm length: 249
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 89

Conread position: 604-833
Cow position:
Alignm length: 235
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 53

Conread position: 608-833
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 86, 49

Conread position: 608-833
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 78, 35

Conread position: 614-833
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 94

Conread position: 617-833
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 164

Conread position: 622-833
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 72, 118

Conread position: 650-833
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 55

Show alignments to all cow chromosomes.