Cow genome map
| Conread name: | Lng1-LNG010013G12 |
| Conread position: | 1-527 |
| Cow position: | chr23:15219338-15218789 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 1-579 |
| Cow position: | chr23:2716956-2717552 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 1-634 |
| Cow position: | chr23:27971104-27971753 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 167 |
| Conread position: | 1-634 |
| Cow position: | chr23:28025233-28025881 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 1-665 |
| Cow position: | chr23:28367956-28367273 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 127 |
| Conread position: | 1-816 |
| Cow position: | chr23:4817586-4818430 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 640 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 161 |
| Conread position: | 1-816 |
| Cow position: | chr23:4889248-4890093 (view UCSC Genome Browser custom track) |
| Alignm length: | 853 |
| Alignm identity: | 643 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 175 |
| Conread position: | 1-816 |
| Cow position: | chr23:27400070-27400930 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 642 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 175 |
| Conread position: | 1-825 |
| Cow position: | chr23:20155645-20154814 (view UCSC Genome Browser custom track) |
| Alignm length: | 861 |
| Alignm identity: | 634 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 1-831 |
| Cow position: | chr23:3880516-3879668 (view UCSC Genome Browser custom track) |
| Alignm length: | 860 |
| Alignm identity: | 633 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 164 |
| Conread position: | 1-833 |
| Cow position: | chr23:2026517-2025660 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 662 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 176 |
| Conread position: | 1-833 |
| Cow position: | chr23:2794667-2793837 (view UCSC Genome Browser custom track) |
| Alignm length: | 846 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 74 |
| Conread position: | 1-833 |
| Cow position: | chr23:3706685-3707543 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 637 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 1-833 |
| Cow position: | chr23:4640059-4639172 (view UCSC Genome Browser custom track) |
| Alignm length: | 898 |
| Alignm identity: | 652 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 175 |
| Conread position: | 1-833 |
| Cow position: | chr23:15177638-15178492 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 652 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 1-833 |
| Cow position: | chr23:19490107-19490971 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 640 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 135 |
| Conread position: | 1-833 |
| Cow position: | chr23:36030810-36029958 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 649 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 177 |
| Conread position: | 2-576 |
| Cow position: | chr23:16614869-16614273 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 6-569 |
| Cow position: | chr23:2312671-2312083 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 167 |
| Conread position: | 6-833 |
| Cow position: | chr23:618876-618052 (view UCSC Genome Browser custom track) |
| Alignm length: | 854 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 12 |
| Conread position: | 12-833 |
| Cow position: | chr23:11779361-11780203 (view UCSC Genome Browser custom track) |
| Alignm length: | 852 |
| Alignm identity: | 634 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 164 |
| Conread position: | 13-825 |
| Cow position: | chr23:13510237-13511029 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 103 |
| Conread position: | 13-831 |
| Cow position: | chr23:19950019-19949168 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 626 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 160 |
| Conread position: | 13-833 |
| Cow position: | chr23:29451764-29450929 (view UCSC Genome Browser custom track) |
| Alignm length: | 854 |
| Alignm identity: | 634 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 17-833 |
| Cow position: | chr23:14262443-14263293 (view UCSC Genome Browser custom track) |
| Alignm length: | 865 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 128 |
| Conread position: | 19-831 |
| Cow position: | chr23:22146714-22145888 (view UCSC Genome Browser custom track) |
| Alignm length: | 845 |
| Alignm identity: | 634 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 154 |
| Conread position: | 25-825 |
| Cow position: | chr23:15526155-15526989 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 643 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 151 |
| Conread position: | 85-823 |
| Cow position: | chr23:1013137-1012393 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 14 |
| Conread position: | 96-831 |
| Cow position: | chr23:16498566-16497826 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 40 |
| Conread position: | 98-826 |
| Cow position: | chr23:15876908-15876151 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 77 |
| Conread position: | 108-831 |
| Cow position: | chr23:2758565-2759319 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 118-833 |
| Cow position: | chr23:1023271-1022536 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 55 |
| Conread position: | 130-662 |
| Cow position: | chr23:23171195-23171751 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 136-833 |
| Cow position: | chr23:31649281-31648607 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 36 |
| Conread position: | 145-833 |
| Cow position: | chr23:965788-965075 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 151-825 |
| Cow position: | chr23:2341792-2342492 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 159-696 |
| Cow position: | chr23:2781245-2780683 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 170-833 |
| Cow position: | chr23:5873832-5873152 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 50 |
| Conread position: | 181-714 |
| Cow position: | chr23:6219997-6220554 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 117 |
| Conread position: | 183-825 |
| Cow position: | chr23:2576172-2576821 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 135 |
| Conread position: | 228-833 |
| Cow position: | chr23:14964244-14963630 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 230-634 |
| Cow position: | chr23:28078454-28078866 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 63 |
| Conread position: | 243-584 |
| Cow position: | chr23:8286845-8287204 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 132 |
| Conread position: | 247-551 |
| Cow position: | chr23:948972-948669 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 63 |
| Conread position: | 247-764 |
| Cow position: | chr23:1956721-1957242 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 275 |
| Conread position: | 274-819 |
| Cow position: | chr23:5739510-5738953 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 322 |
| Conread position: | 275-816 |
| Cow position: | chr23:38581573-38582099 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 178 |
| Conread position: | 277-709 |
| Cow position: | chr23:26159878-26159411 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 285-833 |
| Cow position: | chr23:13511966-13512526 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 241 |
| Conread position: | 332-833 |
| Cow position: | chr23:30563338-30563835 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 353-634 |
| Cow position: | chr23:28108614-28108899 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 369-830 |
| Cow position: | chr23:21243795-21243326 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 272 |
| Conread position: | 371-810 |
| Cow position: | chr23:25639903-25640341 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 410-830 |
| Cow position: | chr23:30237260-30237690 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 415-816 |
| Cow position: | chr23:14777959-14777555 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 6 |
| Conread position: | 431-825 |
| Cow position: | chr23:14923283-14922882 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 298 |
| Conread position: | 431-831 |
| Cow position: | chr23:41142214-41141809 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 169 |
| Conread position: | 432-831 |
| Cow position: | chr23:14972956-14972551 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 10 |
| Conread position: | 444-833 |
| Cow position: | chr23:7045150-7044761 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 22, 5 |
| Conread position: | 445-831 |
| Cow position: | chr23:28218448-28218843 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 286 |
| Conread position: | 486-816 |
| Cow position: | chr23:28336606-28336939 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 490-833 |
| Cow position: | chr23:23282304-23282640 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 495-825 |
| Cow position: | chr23:37716585-37716917 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 539-833 |
| Cow position: | chr23:16054905-16055191 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 111 |
| Conread position: | 555-831 |
| Cow position: | chr23:11714728-11714448 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 141, 168 |
| Conread position: | 557-825 |
| Cow position: | chr23:2718456-2718725 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 46 |
| Conread position: | 562-833 |
| Cow position: | chr23:21822129-21821874 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 193, 30 |
| Conread position: | 563-823 |
| Cow position: | chr23:16614025-16613763 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 123, 67 |
| Conread position: | 563-831 |
| Cow position: | chr23:4513619-4513902 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 75, 227 |
| Conread position: | 592-831 |
| Cow position: | chr23:38691668-38691909 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 92, 131 |
| Conread position: | 622-831 |
| Cow position: | chr23:7314115-7314328 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 74, 104 |
Show alignments to all cow chromosomes.