Cow genome map
Conread name: | Lng1-LNG010013G12 |
Conread position: | 1-763 |
Cow position: | chr24:12335110-12334325 (view UCSC Genome Browser custom track) |
Alignm length: | 792 |
Alignm identity: | 598 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 167 |
Conread position: | 1-823 |
Cow position: | chr24:12110053-12109211 (view UCSC Genome Browser custom track) |
Alignm length: | 863 |
Alignm identity: | 608 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 17 |
Conread position: | 1-825 |
Cow position: | chr24:19834042-19834906 (view UCSC Genome Browser custom track) |
Alignm length: | 872 |
Alignm identity: | 659 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 33 |
Conread position: | 1-833 |
Cow position: | chr24:4414883-4414033 (view UCSC Genome Browser custom track) |
Alignm length: | 863 |
Alignm identity: | 650 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 175 |
Conread position: | 1-833 |
Cow position: | chr24:9544713-9545564 (view UCSC Genome Browser custom track) |
Alignm length: | 868 |
Alignm identity: | 652 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 175 |
Conread position: | 1-833 |
Cow position: | chr24:12086853-12087709 (view UCSC Genome Browser custom track) |
Alignm length: | 870 |
Alignm identity: | 654 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 177 |
Conread position: | 1-833 |
Cow position: | chr24:29187939-29188800 (view UCSC Genome Browser custom track) |
Alignm length: | 871 |
Alignm identity: | 663 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 175 |
Conread position: | 5-559 |
Cow position: | chr24:17302802-17302265 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 190 |
Conread position: | 5-597 |
Cow position: | chr24:6059552-6060169 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 168 |
Conread position: | 5-778 |
Cow position: | chr24:17371287-17370527 (view UCSC Genome Browser custom track) |
Alignm length: | 813 |
Alignm identity: | 534 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 156 |
Conread position: | 5-816 |
Cow position: | chr24:33934027-33934881 (view UCSC Genome Browser custom track) |
Alignm length: | 861 |
Alignm identity: | 633 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 171 |
Conread position: | 6-689 |
Cow position: | chr24:17696318-17695617 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 528 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 170 |
Conread position: | 6-718 |
Cow position: | chr24:8151603-8150893 (view UCSC Genome Browser custom track) |
Alignm length: | 741 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 31 |
Conread position: | 6-758 |
Cow position: | chr24:22971748-22972527 (view UCSC Genome Browser custom track) |
Alignm length: | 787 |
Alignm identity: | 604 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 109 |
Conread position: | 6-813 |
Cow position: | chr24:36559101-36558289 (view UCSC Genome Browser custom track) |
Alignm length: | 844 |
Alignm identity: | 611 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 49 |
Conread position: | 6-825 |
Cow position: | chr24:9188080-9187240 (view UCSC Genome Browser custom track) |
Alignm length: | 853 |
Alignm identity: | 614 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-830 |
Cow position: | chr24:6435132-6435990 (view UCSC Genome Browser custom track) |
Alignm length: | 863 |
Alignm identity: | 625 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-831 |
Cow position: | chr24:5992571-5991718 (view UCSC Genome Browser custom track) |
Alignm length: | 860 |
Alignm identity: | 624 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 159 |
Conread position: | 6-831 |
Cow position: | chr24:6024450-6023580 (view UCSC Genome Browser custom track) |
Alignm length: | 877 |
Alignm identity: | 635 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-831 |
Cow position: | chr24:12700163-12699316 (view UCSC Genome Browser custom track) |
Alignm length: | 866 |
Alignm identity: | 608 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-831 |
Cow position: | chr24:23505211-23504352 (view UCSC Genome Browser custom track) |
Alignm length: | 863 |
Alignm identity: | 627 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 170 |
Conread position: | 6-831 |
Cow position: | chr24:29305667-29304805 (view UCSC Genome Browser custom track) |
Alignm length: | 867 |
Alignm identity: | 631 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 170 |
Conread position: | 6-831 |
Cow position: | chr24:44018188-44019016 (view UCSC Genome Browser custom track) |
Alignm length: | 846 |
Alignm identity: | 619 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 71 |
Conread position: | 6-833 |
Cow position: | chr24:14389879-14389028 (view UCSC Genome Browser custom track) |
Alignm length: | 874 |
Alignm identity: | 630 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 25 |
Conread position: | 7-833 |
Cow position: | chr24:147955-147102 (view UCSC Genome Browser custom track) |
Alignm length: | 864 |
Alignm identity: | 656 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 169 |
Conread position: | 9-543 |
Cow position: | chr24:36709018-36709582 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 110 |
Conread position: | 9-823 |
Cow position: | chr24:7090310-7089490 (view UCSC Genome Browser custom track) |
Alignm length: | 849 |
Alignm identity: | 616 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 82 |
Conread position: | 10-829 |
Cow position: | chr24:12205652-12204835 (view UCSC Genome Browser custom track) |
Alignm length: | 855 |
Alignm identity: | 586 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 13 |
Conread position: | 10-831 |
Cow position: | chr24:13232910-13233766 (view UCSC Genome Browser custom track) |
Alignm length: | 862 |
Alignm identity: | 617 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 155 |
Conread position: | 11-833 |
Cow position: | chr24:38638202-38639036 (view UCSC Genome Browser custom track) |
Alignm length: | 855 |
Alignm identity: | 627 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 47 |
Conread position: | 17-718 |
Cow position: | chr24:6084733-6085448 (view UCSC Genome Browser custom track) |
Alignm length: | 726 |
Alignm identity: | 541 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 159 |
Conread position: | 17-829 |
Cow position: | chr24:13188836-13189684 (view UCSC Genome Browser custom track) |
Alignm length: | 859 |
Alignm identity: | 602 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 159 |
Conread position: | 76-833 |
Cow position: | chr24:6406756-6407545 (view UCSC Genome Browser custom track) |
Alignm length: | 795 |
Alignm identity: | 601 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 97 |
Conread position: | 76-833 |
Cow position: | chr24:9091317-9090542 (view UCSC Genome Browser custom track) |
Alignm length: | 796 |
Alignm identity: | 584 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 97 |
Conread position: | 80-825 |
Cow position: | chr24:14871580-14870827 (view UCSC Genome Browser custom track) |
Alignm length: | 776 |
Alignm identity: | 546 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 31 |
Conread position: | 87-636 |
Cow position: | chr24:12129327-12128753 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 79 |
Conread position: | 92-642 |
Cow position: | chr24:6332954-6332381 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 77 |
Conread position: | 170-833 |
Cow position: | chr24:25467797-25467128 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 128 |
Conread position: | 205-829 |
Cow position: | chr24:1450312-1450911 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 28 |
Conread position: | 227-826 |
Cow position: | chr24:12238180-12238787 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 164 |
Conread position: | 249-825 |
Cow position: | chr24:6675515-6676088 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 404 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 65, 200 |
Conread position: | 263-831 |
Cow position: | chr24:6129755-6130319 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 81 |
Conread position: | 266-833 |
Cow position: | chr24:6142018-6142582 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 27 |
Conread position: | 299-831 |
Cow position: | chr24:17321660-17322200 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 324 |
Conread position: | 341-816 |
Cow position: | chr24:6337409-6337881 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 59 |
Conread position: | 342-732 |
Cow position: | chr24:6668795-6668411 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 369, 45 |
Conread position: | 342-820 |
Cow position: | chr24:12150302-12149798 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 123 |
Conread position: | 342-831 |
Cow position: | chr24:13044620-13044120 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 172 |
Conread position: | 349-832 |
Cow position: | chr24:35841051-35840572 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 97 |
Conread position: | 356-829 |
Cow position: | chr24:35869530-35869064 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 106 |
Conread position: | 359-830 |
Cow position: | chr24:6353185-6353640 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 81 |
Conread position: | 360-833 |
Cow position: | chr24:37320556-37320099 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 66 |
Conread position: | 431-825 |
Cow position: | chr24:7062644-7063044 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 34 |
Conread position: | 446-833 |
Cow position: | chr24:12163058-12163448 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 216 |
Conread position: | 448-825 |
Cow position: | chr24:6344067-6344444 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 244 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 147, 170 |
Conread position: | 450-830 |
Cow position: | chr24:13179896-13179513 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 177 |
Conread position: | 452-816 |
Cow position: | chr24:36480832-36480476 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 237 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 109, 181 |
Conread position: | 458-816 |
Cow position: | chr24:6060326-6060685 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 223 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 88, 198 |
Conread position: | 463-824 |
Cow position: | chr24:19640816-19641185 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 135 |
Conread position: | 471-833 |
Cow position: | chr24:14278071-14277707 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 256 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 89, 52 |
Conread position: | 486-831 |
Cow position: | chr24:11152081-11151729 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 267 |
Conread position: | 495-826 |
Cow position: | chr24:17425566-17425237 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 214 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 17, 23 |
Conread position: | 523-816 |
Cow position: | chr24:37199691-37199409 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 204 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 36, 20 |
Conread position: | 523-833 |
Cow position: | chr24:29706552-29706868 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 223 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 22, 59 |
Conread position: | 531-833 |
Cow position: | chr24:17300700-17300409 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 226 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 19, 117 |
Conread position: | 555-831 |
Cow position: | chr24:38585891-38585610 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 218 |
Conread position: | 555-833 |
Cow position: | chr24:16561096-16560804 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 205 |
Conread position: | 562-824 |
Cow position: | chr24:24074997-24074744 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 173 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 582-833 |
Cow position: | chr24:4044996-4044742 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 168 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 103, 148 |
Conread position: | 596-833 |
Cow position: | chr24:25437564-25437793 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 128 |
Conread position: | 603-833 |
Cow position: | chr24:10222893-10222664 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 177 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 83, 142 |
Conread position: | 627-833 |
Cow position: | chr24:6324051-6323845 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 157 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 19, 97 |
Show alignments to all cow chromosomes.