Cow genome map

Conread name: Lng1-LNG010013G12

Conread position: 1-763
Cow position: chr24:12335110-12334325 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 167

Conread position: 1-823
Cow position: chr24:12110053-12109211 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 17

Conread position: 1-825
Cow position: chr24:19834042-19834906 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 33

Conread position: 1-833
Cow position: chr24:4414883-4414033 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position: chr24:9544713-9545564 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position: chr24:12086853-12087709 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 177

Conread position: 1-833
Cow position: chr24:29187939-29188800 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 5-559
Cow position: chr24:17302802-17302265 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 190

Conread position: 5-597
Cow position: chr24:6059552-6060169 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 168

Conread position: 5-778
Cow position: chr24:17371287-17370527 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 156

Conread position: 5-816
Cow position: chr24:33934027-33934881 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 171

Conread position: 6-689
Cow position: chr24:17696318-17695617 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 170

Conread position: 6-718
Cow position: chr24:8151603-8150893 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 31

Conread position: 6-758
Cow position: chr24:22971748-22972527 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 109

Conread position: 6-813
Cow position: chr24:36559101-36558289 (view UCSC Genome Browser custom track)
Alignm length: 844
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 49

Conread position: 6-825
Cow position: chr24:9188080-9187240 (view UCSC Genome Browser custom track)
Alignm length: 853
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-830
Cow position: chr24:6435132-6435990 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position: chr24:5992571-5991718 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 159

Conread position: 6-831
Cow position: chr24:6024450-6023580 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position: chr24:12700163-12699316 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position: chr24:23505211-23504352 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 170

Conread position: 6-831
Cow position: chr24:29305667-29304805 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position: chr24:44018188-44019016 (view UCSC Genome Browser custom track)
Alignm length: 846
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 71

Conread position: 6-833
Cow position: chr24:14389879-14389028 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 25

Conread position: 7-833
Cow position: chr24:147955-147102 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 169

Conread position: 9-543
Cow position: chr24:36709018-36709582 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 110

Conread position: 9-823
Cow position: chr24:7090310-7089490 (view UCSC Genome Browser custom track)
Alignm length: 849
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 82

Conread position: 10-829
Cow position: chr24:12205652-12204835 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 13

Conread position: 10-831
Cow position: chr24:13232910-13233766 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 155

Conread position: 11-833
Cow position: chr24:38638202-38639036 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 47

Conread position: 17-718
Cow position: chr24:6084733-6085448 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 159

Conread position: 17-829
Cow position: chr24:13188836-13189684 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 159

Conread position: 76-833
Cow position: chr24:6406756-6407545 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 97

Conread position: 76-833
Cow position: chr24:9091317-9090542 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 97

Conread position: 80-825
Cow position: chr24:14871580-14870827 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 31

Conread position: 87-636
Cow position: chr24:12129327-12128753 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 79

Conread position: 92-642
Cow position: chr24:6332954-6332381 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 77

Conread position: 170-833
Cow position: chr24:25467797-25467128 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 128

Conread position: 205-829
Cow position: chr24:1450312-1450911 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 28

Conread position: 227-826
Cow position: chr24:12238180-12238787 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 164

Conread position: 249-825
Cow position: chr24:6675515-6676088 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 404
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 200

Conread position: 263-831
Cow position: chr24:6129755-6130319 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 81

Conread position: 266-833
Cow position: chr24:6142018-6142582 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 27

Conread position: 299-831
Cow position: chr24:17321660-17322200 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 324

Conread position: 341-816
Cow position: chr24:6337409-6337881 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 59

Conread position: 342-732
Cow position: chr24:6668795-6668411 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 45

Conread position: 342-820
Cow position: chr24:12150302-12149798 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 123

Conread position: 342-831
Cow position: chr24:13044620-13044120 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 172

Conread position: 349-832
Cow position: chr24:35841051-35840572 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 97

Conread position: 356-829
Cow position: chr24:35869530-35869064 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 106

Conread position: 359-830
Cow position: chr24:6353185-6353640 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 81

Conread position: 360-833
Cow position: chr24:37320556-37320099 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 66

Conread position: 431-825
Cow position: chr24:7062644-7063044 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 34

Conread position: 446-833
Cow position: chr24:12163058-12163448 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 216

Conread position: 448-825
Cow position: chr24:6344067-6344444 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 244
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 147, 170

Conread position: 450-830
Cow position: chr24:13179896-13179513 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 177

Conread position: 452-816
Cow position: chr24:36480832-36480476 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 237
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 181

Conread position: 458-816
Cow position: chr24:6060326-6060685 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 223
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 88, 198

Conread position: 463-824
Cow position: chr24:19640816-19641185 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 135

Conread position: 471-833
Cow position: chr24:14278071-14277707 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 256
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 89, 52

Conread position: 486-831
Cow position: chr24:11152081-11151729 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 267

Conread position: 495-826
Cow position: chr24:17425566-17425237 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 214
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 23

Conread position: 523-816
Cow position: chr24:37199691-37199409 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 20

Conread position: 523-833
Cow position: chr24:29706552-29706868 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 59

Conread position: 531-833
Cow position: chr24:17300700-17300409 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 19, 117

Conread position: 555-831
Cow position: chr24:38585891-38585610 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 218

Conread position: 555-833
Cow position: chr24:16561096-16560804 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 205

Conread position: 562-824
Cow position: chr24:24074997-24074744 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 582-833
Cow position: chr24:4044996-4044742 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 103, 148

Conread position: 596-833
Cow position: chr24:25437564-25437793 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 128

Conread position: 603-833
Cow position: chr24:10222893-10222664 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 83, 142

Conread position: 627-833
Cow position: chr24:6324051-6323845 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 97

Show alignments to all cow chromosomes.