Cow genome map

Conread name: Lng1-LNG010013G12

Conread position: 1-397
Cow position:
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 81

Conread position: 1-590
Cow position:
Alignm length: 627
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 171

Conread position: 1-729
Cow position:
Alignm length: 765
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-762
Cow position:
Alignm length: 809
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-803
Cow position:
Alignm length: 825
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 172

Conread position: 1-816
Cow position:
Alignm length: 863
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 168

Conread position: 1-816
Cow position:
Alignm length: 852
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-825
Cow position:
Alignm length: 866
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 108

Conread position: 1-825
Cow position:
Alignm length: 852
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 147

Conread position: 1-830
Cow position:
Alignm length: 860
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 164

Conread position: 1-831
Cow position:
Alignm length: 871
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 84

Conread position: 1-831
Cow position:
Alignm length: 861
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 176

Conread position: 1-833
Cow position:
Alignm length: 877
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 123

Conread position: 1-833
Cow position:
Alignm length: 870
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 177

Conread position: 1-833
Cow position:
Alignm length: 861
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 891
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 175

Conread position: 2-833
Cow position:
Alignm length: 878
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 6-689
Cow position:
Alignm length: 710
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-718
Cow position:
Alignm length: 731
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 30

Conread position: 6-747
Cow position:
Alignm length: 767
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 5

Conread position: 6-784
Cow position:
Alignm length: 811
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 63

Conread position: 6-816
Cow position:
Alignm length: 847
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 149

Conread position: 6-825
Cow position:
Alignm length: 857
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 6-825
Cow position:
Alignm length: 856
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 113

Conread position: 6-831
Cow position:
Alignm length: 877
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 188

Conread position: 6-831
Cow position:
Alignm length: 861
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 165

Conread position: 6-831
Cow position:
Alignm length: 861
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 6-831
Cow position:
Alignm length: 868
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 6-832
Cow position:
Alignm length: 841
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 8-831
Cow position:
Alignm length: 859
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 168

Conread position: 8-833
Cow position:
Alignm length: 854
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 9-833
Cow position:
Alignm length: 856
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 167

Conread position: 11-493
Cow position:
Alignm length: 513
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 165

Conread position: 11-752
Cow position:
Alignm length: 768
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 17-588
Cow position:
Alignm length: 588
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 20

Conread position: 17-644
Cow position:
Alignm length: 651
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 60

Conread position: 17-833
Cow position:
Alignm length: 854
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 159

Conread position: 25-825
Cow position:
Alignm length: 832
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 151

Conread position: 37-825
Cow position:
Alignm length: 823
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 139

Conread position: 44-824
Cow position:
Alignm length: 812
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 19

Conread position: 53-670
Cow position:
Alignm length: 643
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 120

Conread position: 75-831
Cow position:
Alignm length: 793
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 98

Conread position: 77-833
Cow position:
Alignm length: 797
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 97

Conread position: 101-609
Cow position:
Alignm length: 535
Alignm identity: 351
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 12, 34

Conread position: 107-816
Cow position:
Alignm length: 751
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 66

Conread position: 120-745
Cow position:
Alignm length: 660
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 41

Conread position: 133-798
Cow position:
Alignm length: 696
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 40

Conread position: 139-831
Cow position:
Alignm length: 741
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 16

Conread position: 146-825
Cow position:
Alignm length: 717
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 24

Conread position: 181-738
Cow position:
Alignm length: 580
Alignm identity: 377
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 119

Conread position: 228-833
Cow position:
Alignm length: 624
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 74

Conread position: 228-833
Cow position:
Alignm length: 636
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 191

Conread position: 252-825
Cow position:
Alignm length: 588
Alignm identity: 362
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 49

Conread position: 258-833
Cow position:
Alignm length: 593
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 22

Conread position: 263-833
Cow position:
Alignm length: 610
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 30

Conread position: 275-813
Cow position:
Alignm length: 555
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 157

Conread position: 275-833
Cow position:
Alignm length: 581
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 14

Conread position: 276-830
Cow position:
Alignm length: 575
Alignm identity: 351
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 26

Conread position: 285-675
Cow position:
Alignm length: 406
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 193

Conread position: 335-829
Cow position:
Alignm length: 524
Alignm identity: 358
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 94, 51

Conread position: 336-541
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 337-438
Cow position:
Alignm length: 102
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 339-786
Cow position:
Alignm length: 474
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 340-823
Cow position:
Alignm length: 503
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 271

Conread position: 340-831
Cow position:
Alignm length: 501
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 174

Conread position: 342-831
Cow position:
Alignm length: 514
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 266

Conread position: 346-833
Cow position:
Alignm length: 491
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 23

Conread position: 385-831
Cow position:
Alignm length: 460
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 350

Conread position: 429-831
Cow position:
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 434-831
Cow position:
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 292

Conread position: 454-833
Cow position:
Alignm length: 388
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 31

Conread position: 461-833
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 76

Conread position: 493-833
Cow position:
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 135

Conread position: 517-831
Cow position:
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 213

Conread position: 518-832
Cow position:
Alignm length: 325
Alignm identity: 219
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 83

Conread position: 561-832
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 203

Conread position: 567-833
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 119, 20

Conread position: 572-833
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 122, 91

Conread position: 582-825
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 38

Conread position: 626-824
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 98

Conread position: 637-831
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 86

Conread position: 639-831
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 87

Conread position: 651-831
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 72

Show alignments to all cow chromosomes.