Cow genome map

Conread name: Lng1-LNG010013G12

Conread position: 1-412
Cow position:
Alignm length: 430
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 176

Conread position: 1-694
Cow position:
Alignm length: 715
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 16

Conread position: 1-816
Cow position:
Alignm length: 854
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 135

Conread position: 1-825
Cow position:
Alignm length: 855
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 177

Conread position: 1-825
Cow position:
Alignm length: 863
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 164

Conread position: 1-830
Cow position:
Alignm length: 876
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 181

Conread position: 1-831
Cow position:
Alignm length: 875
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 175

Conread position: 1-831
Cow position:
Alignm length: 868
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 175

Conread position: 1-832
Cow position:
Alignm length: 873
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-832
Cow position:
Alignm length: 870
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 11

Conread position: 1-832
Cow position:
Alignm length: 866
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 178

Conread position: 1-833
Cow position:
Alignm length: 869
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 57

Conread position: 1-833
Cow position:
Alignm length: 865
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 171

Conread position: 1-833
Cow position:
Alignm length: 872
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 862
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 787

Conread position: 1-833
Cow position:
Alignm length: 865
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 120

Conread position: 1-833
Cow position:
Alignm length: 868
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 870
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 1-833
Cow position:
Alignm length: 874
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 87

Conread position: 1-833
Cow position:
Alignm length: 870
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 133

Conread position: 2-816
Cow position:
Alignm length: 866
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 174

Conread position: 2-820
Cow position:
Alignm length: 857
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 2-833
Cow position:
Alignm length: 863
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 167

Conread position: 2-833
Cow position:
Alignm length: 869
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 174

Conread position: 5-423
Cow position:
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 12

Conread position: 5-831
Cow position:
Alignm length: 872
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 316

Conread position: 6-529
Cow position:
Alignm length: 551
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 12

Conread position: 6-529
Cow position:
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 6-570
Cow position:
Alignm length: 591
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 160

Conread position: 6-663
Cow position:
Alignm length: 687
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 170

Conread position: 6-718
Cow position:
Alignm length: 746
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 172

Conread position: 6-816
Cow position:
Alignm length: 848
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 98

Conread position: 6-820
Cow position:
Alignm length: 855
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 117

Conread position: 6-830
Cow position:
Alignm length: 859
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 89

Conread position: 6-831
Cow position:
Alignm length: 862
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position:
Alignm length: 866
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 166

Conread position: 6-831
Cow position:
Alignm length: 855
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 30

Conread position: 6-831
Cow position:
Alignm length: 859
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 58

Conread position: 6-831
Cow position:
Alignm length: 868
Alignm identity: 636
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 6-831
Cow position:
Alignm length: 860
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position:
Alignm length: 854
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 68

Conread position: 6-831
Cow position:
Alignm length: 860
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 155

Conread position: 6-831
Cow position:
Alignm length: 858
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 78

Conread position: 6-831
Cow position:
Alignm length: 858
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 132

Conread position: 6-831
Cow position:
Alignm length: 869
Alignm identity: 623
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 174

Conread position: 6-831
Cow position:
Alignm length: 866
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 166

Conread position: 6-831
Cow position:
Alignm length: 857
Alignm identity: 623
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 157

Conread position: 6-831
Cow position:
Alignm length: 860
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 170

Conread position: 6-831
Cow position:
Alignm length: 865
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 114

Conread position: 6-831
Cow position:
Alignm length: 865
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 170

Conread position: 6-832
Cow position:
Alignm length: 875
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 57

Conread position: 6-832
Cow position:
Alignm length: 871
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 169

Conread position: 6-833
Cow position:
Alignm length: 862
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 18

Conread position: 6-833
Cow position:
Alignm length: 863
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 22

Conread position: 6-833
Cow position:
Alignm length: 863
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 93

Conread position: 7-564
Cow position:
Alignm length: 577
Alignm identity: 357
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 131

Conread position: 7-831
Cow position:
Alignm length: 862
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 114

Conread position: 7-832
Cow position:
Alignm length: 858
Alignm identity: 517
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 43, 68

Conread position: 7-832
Cow position:
Alignm length: 852
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 57

Conread position: 8-805
Cow position:
Alignm length: 821
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 170

Conread position: 9-833
Cow position:
Alignm length: 859
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 119

Conread position: 10-832
Cow position:
Alignm length: 850
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 11-779
Cow position:
Alignm length: 813
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 6

Conread position: 11-832
Cow position:
Alignm length: 861
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 56

Conread position: 14-543
Cow position:
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 162

Conread position: 17-585
Cow position:
Alignm length: 595
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 155

Conread position: 17-623
Cow position:
Alignm length: 633
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 105

Conread position: 17-831
Cow position:
Alignm length: 856
Alignm identity: 623
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 25

Conread position: 17-833
Cow position:
Alignm length: 842
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 16

Conread position: 25-822
Cow position:
Alignm length: 841
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 153

Conread position: 41-569
Cow position:
Alignm length: 557
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 128

Conread position: 57-831
Cow position:
Alignm length: 817
Alignm identity: 508
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 16

Conread position: 63-831
Cow position:
Alignm length: 796
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 39

Conread position: 63-831
Cow position:
Alignm length: 805
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 110

Conread position: 63-833
Cow position:
Alignm length: 805
Alignm identity: 497
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 118, 22

Conread position: 70-825
Cow position:
Alignm length: 785
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 91

Conread position: 78-711
Cow position:
Alignm length: 651
Alignm identity: 412
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 180, 19

Conread position: 89-825
Cow position:
Alignm length: 776
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 84

Conread position: 95-811
Cow position:
Alignm length: 757
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 31

Conread position: 108-832
Cow position:
Alignm length: 750
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 12

Conread position: 113-776
Cow position:
Alignm length: 700
Alignm identity: 429
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 13

Conread position: 128-833
Cow position:
Alignm length: 735
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 45

Conread position: 130-609
Cow position:
Alignm length: 505
Alignm identity: 339
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 35

Conread position: 130-831
Cow position:
Alignm length: 734
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 43

Conread position: 137-830
Cow position:
Alignm length: 722
Alignm identity: 440
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 28

Conread position: 143-559
Cow position:
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 152

Conread position: 148-825
Cow position:
Alignm length: 717
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 25

Conread position: 170-807
Cow position:
Alignm length: 670
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 579

Conread position: 173-833
Cow position:
Alignm length: 700
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 138

Conread position: 174-621
Cow position:
Alignm length: 472
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 123

Conread position: 180-833
Cow position:
Alignm length: 678
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 280

Conread position: 212-548
Cow position:
Alignm length: 354
Alignm identity: 214
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 107, 0

Conread position: 235-831
Cow position:
Alignm length: 624
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 525

Conread position: 235-831
Cow position:
Alignm length: 615
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 289

Conread position: 249-825
Cow position:
Alignm length: 596
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 201

Conread position: 261-649
Cow position:
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 52

Conread position: 263-825
Cow position:
Alignm length: 587
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 264-832
Cow position:
Alignm length: 577
Alignm identity: 358
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 25

Conread position: 268-519
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 79, 0

Conread position: 269-806
Cow position:
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 231

Conread position: 275-652
Cow position:
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 164

Conread position: 280-475
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 283-778
Cow position:
Alignm length: 514
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 34

Conread position: 300-674
Cow position:
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 113

Conread position: 329-830
Cow position:
Alignm length: 518
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 74

Conread position: 335-826
Cow position:
Alignm length: 510
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 187

Conread position: 335-832
Cow position:
Alignm length: 511
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 156

Conread position: 342-825
Cow position:
Alignm length: 496
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 387

Conread position: 342-830
Cow position:
Alignm length: 495
Alignm identity: 322
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 90, 151

Conread position: 342-833
Cow position:
Alignm length: 505
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 172

Conread position: 343-825
Cow position:
Alignm length: 488
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 38

Conread position: 343-832
Cow position:
Alignm length: 506
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 145

Conread position: 355-833
Cow position:
Alignm length: 487
Alignm identity: 298
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 85, 44

Conread position: 357-825
Cow position:
Alignm length: 486
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 158

Conread position: 365-831
Cow position:
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 260

Conread position: 369-757
Cow position:
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 161

Conread position: 376-833
Cow position:
Alignm length: 473
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 391-833
Cow position:
Alignm length: 454
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 74

Conread position: 393-831
Cow position:
Alignm length: 452
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 59

Conread position: 410-825
Cow position:
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 38

Conread position: 427-833
Cow position:
Alignm length: 420
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 87

Conread position: 431-825
Cow position:
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 83

Conread position: 433-831
Cow position:
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 15

Conread position: 434-831
Cow position:
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 350

Conread position: 437-832
Cow position:
Alignm length: 410
Alignm identity: 267
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 11, 16

Conread position: 445-830
Cow position:
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 66

Conread position: 450-831
Cow position:
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 137

Conread position: 465-829
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 110

Conread position: 466-833
Cow position:
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 20

Conread position: 468-833
Cow position:
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 201

Conread position: 480-768
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 108

Conread position: 480-816
Cow position:
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 227

Conread position: 485-817
Cow position:
Alignm length: 345
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 54

Conread position: 486-825
Cow position:
Alignm length: 351
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 22

Conread position: 486-833
Cow position:
Alignm length: 355
Alignm identity: 233
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 42

Conread position: 487-829
Cow position:
Alignm length: 359
Alignm identity: 261
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 99

Conread position: 515-833
Cow position:
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 229

Conread position: 516-831
Cow position:
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 267

Conread position: 524-833
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 32

Conread position: 555-823
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 135, 13

Conread position: 556-783
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 75

Conread position: 562-832
Cow position:
Alignm length: 279
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 160

Conread position: 564-833
Cow position:
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 191

Conread position: 569-832
Cow position:
Alignm length: 274
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 26

Conread position: 579-825
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 117

Conread position: 581-831
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 115, 145

Conread position: 613-833
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 45

Conread position: 617-831
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 109

Conread position: 621-833
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 27

Conread position: 629-833
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 644-833
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.