Cow genome map

Conread name: Lng1-LNG010014A07

Conread position: 1-116
Cow position: chr15:16904763-16904882 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 1-134
Cow position: chr15:19403119-19403254 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 64

Conread position: 1-141
Cow position: chr15:608283-608430 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 70

Conread position: 1-146
Cow position: chr15:20472407-20472260 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 33

Conread position: 1-146
Cow position: chr15:24128789-24128934 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-146
Cow position: chr15:45584864-45585010 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 108, 23

Conread position: 1-147
Cow position: chr15:6168382-6168229 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 21

Conread position: 1-147
Cow position: chr15:27973079-27972929 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 1-148
Cow position: chr15:2968476-2968620 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 61

Conread position: 1-148
Cow position: chr15:5571500-5571349 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-148
Cow position: chr15:6082505-6082355 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-148
Cow position: chr15:10845858-10846009 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 1-148
Cow position: chr15:21832289-21832137 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 1-148
Cow position: chr15:25584950-25584802 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 58

Conread position: 1-148
Cow position: chr15:27281006-27281151 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 69

Conread position: 1-148
Cow position: chr15:30800021-30800169 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 31

Conread position: 1-148
Cow position: chr15:30985649-30985492 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-148
Cow position: chr15:33285017-33285169 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-148
Cow position: chr15:38394556-38394707 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 1-148
Cow position: chr15:38883290-38883443 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 69

Conread position: 1-148
Cow position: chr15:39621479-39621625 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 94

Conread position: 1-149
Cow position: chr15:21893920-21894070 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 68

Conread position: 1-151
Cow position: chr15:33303467-33303623 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 150

Conread position: 1-151
Cow position: chr15:43913952-43913794 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 2-132
Cow position: chr15:4676869-4676733 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 2-147
Cow position: chr15:9871274-9871124 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 2-148
Cow position: chr15:21522926-21523077 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 68

Conread position: 2-151
Cow position: chr15:8962149-8962290 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 4-148
Cow position: chr15:52778388-52778242 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 93

Conread position: 5-129
Cow position: chr15:21582779-21582651 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 15

Conread position: 5-150
Cow position: chr15:49738903-49738758 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 66

Conread position: 5-150
Cow position: chr15:51822284-51822437 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 7-141
Cow position: chr15:21421083-21421222 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 129

Conread position: 7-148
Cow position: chr15:4501119-4501266 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 7-148
Cow position: chr15:9062452-9062307 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 7-148
Cow position: chr15:11995882-11995738 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 63

Conread position: 7-148
Cow position: chr15:15881073-15881222 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 7-148
Cow position: chr15:22939180-22939046 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 81

Conread position: 7-148
Cow position: chr15:50322740-50322882 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 62

Conread position: 7-149
Cow position: chr15:21389024-21388877 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 10-148
Cow position: chr15:28924618-28924479 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 86

Conread position: 15-148
Cow position: chr15:53101739-53101880 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 17-148
Cow position: chr15:144082-143944 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 20-146
Cow position: chr15:47274532-47274658 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 27-148
Cow position: chr15:27123388-27123263 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 110-825
Cow position: chr15:4140007-4139301 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 16

Conread position: 110-827
Cow position: chr15:6648511-6647802 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 16

Conread position: 130-825
Cow position: chr15:50344813-50344124 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 46

Conread position: 132-767
Cow position: chr15:4688953-4689564 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 219

Conread position: 133-799
Cow position: chr15:20348346-20347674 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 25

Conread position: 133-819
Cow position: chr15:1776080-1776766 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 124

Conread position: 133-822
Cow position: chr15:36619242-36618556 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 71

Conread position: 135-712
Cow position: chr15:1760428-1760991 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 184

Conread position: 136-494
Cow position: chr15:16515134-16515480 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 42

Conread position: 136-825
Cow position: chr15:24796785-24797445 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 21

Conread position: 146-822
Cow position: chr15:4642134-4642810 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 192

Conread position: 147-466
Cow position: chr15:4629311-4628993 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 226

Conread position: 150-764
Cow position: chr15:16787709-16787090 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 217

Conread position: 150-783
Cow position: chr15:29884375-29883738 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 19

Conread position: 160-701
Cow position: chr15:40344296-40343772 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 14

Conread position: 166-808
Cow position: chr15:29341164-29340511 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 149

Conread position: 169-805
Cow position: chr15:1082394-1083008 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 171-821
Cow position: chr15:52867589-52868267 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 118

Conread position: 224-827
Cow position: chr15:25908181-25907591 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 132

Conread position: 230-825
Cow position: chr15:24968745-24968143 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 52

Conread position: 263-475
Cow position: chr15:8411902-8412112 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 21

Conread position: 263-826
Cow position: chr15:14855548-14856095 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 22

Conread position: 288-589
Cow position: chr15:9071327-9071623 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 32

Conread position: 288-709
Cow position: chr15:9436634-9437047 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 288-827
Cow position: chr15:37039435-37039958 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 69

Conread position: 304-620
Cow position: chr15:24048585-24048889 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 34

Conread position: 339-532
Cow position: chr15:13286030-13285836 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 88

Conread position: 347-586
Cow position: chr15:3618479-3618715 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 61, 28

Conread position: 350-827
Cow position: chr15:44378159-44377670 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 77

Conread position: 372-825
Cow position: chr15:2008465-2008915 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 7

Conread position: 382-572
Cow position: chr15:5419910-5420096 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 96, 41

Show alignments to all cow chromosomes.