Cow genome map


           Conread name:
           Lng1-LNG010014A07
        

               Conread position:
               1-121
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-133
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 115
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 85
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               48, 83
               

               Conread position:
               2-147
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               2-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               3-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               5-135
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 103
               

               Conread position:
               5-144
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 62
               

               Conread position:
               5-146
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               5-151
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               7-113
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               7-139
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               7-140
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               7-147
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               101, 14
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 115
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 76
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               40, 79
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               8-148
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               8-151
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               12-148
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               14-126
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               14-145
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-148
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               14-148
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               14-148
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               14-148
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               17-150
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-146
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               20-150
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               21-148
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               24-148
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               24-150
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               51-148
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               115-640
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 134
               

               Conread position:
               133-827
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 219
               

               Conread position:
               134-799
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               136-817
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 43
               

               Conread position:
               136-824
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 18
               

               Conread position:
               137-396
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 75
               

               Conread position:
               137-406
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 101
               

               Conread position:
               137-425
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               137-455
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 213
               

               Conread position:
               137-645
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 215
               

               Conread position:
               137-755
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 178
               

               Conread position:
               138-466
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               141-815
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               142-823
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 38
               

               Conread position:
               145-823
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 206
               

               Conread position:
               146-825
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 205
               

               Conread position:
               152-824
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 100
               

               Conread position:
               159-763
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 45
               

               Conread position:
               160-574
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               281
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               161-819
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               162-827
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 17
               

               Conread position:
               170-500
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               17, 161
               

               Conread position:
               182-822
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 158
               

               Conread position:
               184-650
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               186-824
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 98
               

               Conread position:
               196-827
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               207-825
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 50
               

               Conread position:
               236-421
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               33, 115
               

               Conread position:
               244-671
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               263-781
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 5
               

               Conread position:
               264-743
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 73
               

               Conread position:
               265-811
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 83
               

               Conread position:
               268-827
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               286-676
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               295-649
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 347
               

               Conread position:
               300-815
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 47
               

               Conread position:
               320-606
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               48, 107
               

               Conread position:
               324-606
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               12, 100
               

               Conread position:
               326-510
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 61
               

               Conread position:
               339-858
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               342-816
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               345-525
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               12, 81
               
Show alignments to all cow chromosomes.