Cow genome map


           Conread name:
           Lng1-LNG010014A07
        

               Conread position:
               1-118
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 35
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               48, 68
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               45, 120
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               5-144
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 84
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               39, 65
               

               Conread position:
               5-188
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               6-135
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               42, 104
               

               Conread position:
               7-147
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               8-137
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               9-141
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               12-148
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               14-148
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               19-148
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               20-147
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 107
               

               Conread position:
               27-148
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               35-136
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-824
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 15
               

               Conread position:
               119-820
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 122
               

               Conread position:
               133-391
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               133-661
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 162
               

               Conread position:
               133-702
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               133-715
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               133-805
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               136-827
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 199
               

               Conread position:
               137-520
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               137-576
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 38
               

               Conread position:
               137-815
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               137-835
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 179
               

               Conread position:
               138-823
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 103
               

               Conread position:
               164-382
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               12, 178
               

               Conread position:
               164-827
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               165-671
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               165-815
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               170-825
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 94
               

               Conread position:
               211-819
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 117
               

               Conread position:
               217-821
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 217
               

               Conread position:
               223-818
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 150
               

               Conread position:
               263-819
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 213
               

               Conread position:
               304-825
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               306-827
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 53
               

               Conread position:
               307-825
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               334-746
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 92
               

               Conread position:
               338-819
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               339-652
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               341-795
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 87
               

               Conread position:
               341-827
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               345-796
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               345-825
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               346-832
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 78
               

               Conread position:
               348-827
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               353-654
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               362-674
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               372-799
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               387-676
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 35
               
Show alignments to all cow chromosomes.