Cow genome map
| Conread name: | Lng1-LNG010014A07 |
| Conread position: | 1-103 |
| Cow position: | chr19:21816903-21816798 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 1-137 |
| Cow position: | chr19:16694103-16694243 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-141 |
| Cow position: | chr19:22134205-22134347 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 1-146 |
| Cow position: | chr19:5913017-5913157 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 1-146 |
| Cow position: | chr19:6079420-6079566 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 1-146 |
| Cow position: | chr19:48409450-48409308 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 1-147 |
| Cow position: | chr19:53037213-53037362 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 1-148 |
| Cow position: | chr19:2138165-2138314 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 69 |
| Conread position: | 1-148 |
| Cow position: | chr19:6531829-6531682 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 1-148 |
| Cow position: | chr19:8209449-8209598 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-148 |
| Cow position: | chr19:11171279-11171429 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 145 |
| Conread position: | 1-148 |
| Cow position: | chr19:21335667-21335825 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-148 |
| Cow position: | chr19:23005421-23005574 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-148 |
| Cow position: | chr19:24137201-24137049 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-148 |
| Cow position: | chr19:28014419-28014268 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-148 |
| Cow position: | chr19:31378661-31378818 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-148 |
| Cow position: | chr19:51621244-51621392 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 1-150 |
| Cow position: | chr19:2734390-2734241 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 1-157 |
| Cow position: | chr19:22039709-22039552 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 5-148 |
| Cow position: | chr19:37423333-37423485 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 6-128 |
| Cow position: | chr19:10242520-10242395 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 6-134 |
| Cow position: | chr19:21379992-21380124 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 6-148 |
| Cow position: | chr19:38637871-38638010 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 7-127 |
| Cow position: | chr19:2589442-2589318 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-148 |
| Cow position: | chr19:4252038-4252181 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 103, 131 |
| Conread position: | 7-148 |
| Cow position: | chr19:25053739-25053882 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 106 |
| Conread position: | 7-148 |
| Cow position: | chr19:46918783-46918632 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-148 |
| Cow position: | chr19:47118562-47118708 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 7-151 |
| Cow position: | chr19:38596553-38596403 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 14-147 |
| Cow position: | chr19:11534609-11534479 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 14-148 |
| Cow position: | chr19:43431397-43431530 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 14-151 |
| Cow position: | chr19:39661615-39661756 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 20-148 |
| Cow position: | chr19:7492355-7492231 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 20-148 |
| Cow position: | chr19:10093214-10093087 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 20-148 |
| Cow position: | chr19:53657815-53657690 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 21-148 |
| Cow position: | chr19:8270681-8270816 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 34-138 |
| Cow position: | chr19:13306525-13306630 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 110-423 |
| Cow position: | chr19:14528172-14528482 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 16 |
| Conread position: | 134-821 |
| Cow position: | chr19:7472422-7473099 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 137-526 |
| Cow position: | chr19:46821218-46821599 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 142-463 |
| Cow position: | chr19:6475-6785 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 127, 65 |
| Conread position: | 142-825 |
| Cow position: | chr19:30237081-30237757 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 110 |
| Conread position: | 146-662 |
| Cow position: | chr19:542245-541731 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 157-827 |
| Cow position: | chr19:48218985-48218307 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 210 |
| Conread position: | 160-827 |
| Cow position: | chr19:39750564-39751209 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 35 |
| Conread position: | 161-719 |
| Cow position: | chr19:5779253-5778700 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 362 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 14, 188 |
| Conread position: | 166-827 |
| Cow position: | chr19:25085594-25086250 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 38 |
| Conread position: | 191-672 |
| Cow position: | chr19:3032918-3032442 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 161 |
| Conread position: | 200-827 |
| Cow position: | chr19:55975442-55974794 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 142 |
| Conread position: | 211-815 |
| Cow position: | chr19:53737443-53738050 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 47 |
| Conread position: | 232-824 |
| Cow position: | chr19:13852870-13853459 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 385 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 263-495 |
| Cow position: | chr19:34655626-34655393 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 75, 103 |
| Conread position: | 264-541 |
| Cow position: | chr19:17883436-17883701 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 118, 63 |
| Conread position: | 264-818 |
| Cow position: | chr19:3592672-3592135 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 360 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 281-634 |
| Cow position: | chr19:31762627-31762279 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 59 |
| Conread position: | 304-755 |
| Cow position: | chr19:33586324-33585887 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 12 |
| Conread position: | 334-786 |
| Cow position: | chr19:51500966-51501425 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 309 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 13, 101 |
| Conread position: | 334-811 |
| Cow position: | chr19:50724224-50724697 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 92 |
| Conread position: | 339-692 |
| Cow position: | chr19:38812047-38812392 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 340-605 |
| Cow position: | chr19:42867194-42867458 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 353-825 |
| Cow position: | chr19:18787086-18786603 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 147 |
| Conread position: | 366-814 |
| Cow position: | chr19:24688557-24688995 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 58 |
Show alignments to all cow chromosomes.