Cow genome map


           Conread name:
           Lng1-LNG010014A07
        

               Conread position:
               1-103
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               1-137
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 71
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               47, 67
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 145
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 97
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               50, 35
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               6-128
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 63
               

               Conread position:
               6-134
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               6-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               42, 63
               

               Conread position:
               7-127
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               103, 131
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 106
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               7-151
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               14-147
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               14-148
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               14-151
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 96
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               21-148
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               34-138
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               110-423
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 16
               

               Conread position:
               134-821
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 99
               

               Conread position:
               137-526
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 38
               

               Conread position:
               142-463
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               142-825
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 110
               

               Conread position:
               146-662
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               157-827
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 210
               

               Conread position:
               160-827
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 35
               

               Conread position:
               161-719
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               362
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               14, 188
               

               Conread position:
               166-827
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 38
               

               Conread position:
               191-672
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 161
               

               Conread position:
               200-827
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 142
               

               Conread position:
               211-815
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 47
               

               Conread position:
               232-824
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               385
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               263-495
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               75, 103
               

               Conread position:
               264-541
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               118, 63
               

               Conread position:
               264-818
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               360
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 90
               

               Conread position:
               281-634
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               304-755
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 12
               

               Conread position:
               334-786
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               309
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               13, 101
               

               Conread position:
               334-811
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 92
               

               Conread position:
               339-692
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 88
               

               Conread position:
               340-605
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 86
               

               Conread position:
               353-825
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 147
               

               Conread position:
               366-814
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 58
               
Show alignments to all cow chromosomes.