Cow genome map


           Conread name:
           Lng1-LNG010014A07
        

               Conread position:
               1-106
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-108
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-126
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               43, 127
               

               Conread position:
               1-136
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               1-144
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               1-144
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               82, 87
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               106, 64
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 63
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               42, 68
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 50
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 100
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 71
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               127, 122
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               2-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               2-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               2-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 131
               

               Conread position:
               3-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               5-125
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               7-137
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               7-145
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 128
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               7-150
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               8-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               42, 63
               

               Conread position:
               9-126
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-148
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               17-170
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               92, 137
               

               Conread position:
               20-144
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               21-148
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               21-151
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               24-148
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               29-141
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               133-799
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               133-799
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 37
               

               Conread position:
               133-815
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 75
               

               Conread position:
               133-825
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               137-406
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               137-423
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               137-702
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 157
               

               Conread position:
               137-824
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 69
               

               Conread position:
               137-827
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 74
               

               Conread position:
               141-825
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 70
               

               Conread position:
               141-825
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 63
               

               Conread position:
               145-496
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               145-825
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               145-826
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 187
               

               Conread position:
               146-825
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 205
               

               Conread position:
               150-543
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 201
               

               Conread position:
               150-826
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 24
               

               Conread position:
               155-466
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 163
               

               Conread position:
               157-532
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               163-825
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 150
               

               Conread position:
               165-519
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               47, 155
               

               Conread position:
               166-509
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               167-382
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               169-669
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 129
               

               Conread position:
               176-823
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               200-494
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               219-776
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 39
               

               Conread position:
               229-827
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 128
               

               Conread position:
               240-518
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               263-691
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 54
               

               Conread position:
               286-825
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 51
               

               Conread position:
               308-827
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 121
               

               Conread position:
               311-825
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 115
               

               Conread position:
               317-703
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 92
               

               Conread position:
               322-827
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 102
               

               Conread position:
               341-825
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               341-827
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 84
               

               Conread position:
               356-620
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               356-709
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               376-647
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               112, 47
               
Show alignments to all cow chromosomes.